| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2306932 = | 104 (0.960) | 17 (0.170) | 7/164 | NT | 15.7% | intergenic (‑178/+40) | mqo/yojI | malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase |
| ? | NC_000913 | 2306961 = | 87 (0.870) | intergenic (‑207/+11) | mqo/yojI | malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase | |||||
CTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2307037‑2306932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGC > NC_000913/2306961‑2307059 CTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTC < 2:1740869/100‑1CTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAAGATTACGACGCTGACCTGGCGGACTGCTGCCGTC < 2:1988528/100‑1 TTAGCGAGCTGACGGGCGAAGAGTGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCA < 2:2208907/100‑1 AGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGG < 1:267596/100‑1 AGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGG < 2:2533026/100‑1 GCGAGCTGACGTGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGT < 2:590648/100‑1 CGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTC < 2:1313751/100‑1 CGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTC < 2:817571/100‑1 CGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTC < 2:350455/100‑1 CGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTC < 2:2393509/100‑1 GAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA > 2:52687/1‑100 GAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA < 1:1768032/100‑1 GAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA < 1:2186703/100‑1 GAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA > 1:678683/1‑100 GACGCTGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTC > 2:767545/1‑100 GCTGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCTTAATATTATGCCGTCCGGGCAACGGCATCAAGCGAAGCGGCATCGGGATCTTCACCAGTCAGC > 1:1210071/1‑100 CTGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCT > 2:302300/1‑100 CTGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCT > 1:1848205/1‑100 TGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTACTATTATGCCGTCCGCGCCACGACATCACGCGACGCGGCATCGCGCTCTTCTCCCGTCAGCTC > 1:2974378/1‑100 TGACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTC > 2:842714/1‑100 GACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCG > 1:1725277/1‑100 ACCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGC > 1:1362743/1‑100 ACCTGGCGGACTGCTGCCGTCAGGTCAGCGACGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCCCTCTTCGCCCGTCAG > 2:2761429/1‑95 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCCACGGCATCACGCGAAGCGACATCGCGCTCTTCGCCCCTCCGCTCGCT > 2:2605768/1‑100 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 1:1720525/1‑100 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 2:1843671/1‑100 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 1:881593/1‑100 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 1:1720572/1‑100 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCGGACAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGC > 1:564873/1‑99 CCTGGCGGACTGCTGCCGTCAGGTCAGCGTCGTAATATTATGCCGTCCAGGCAACGGCATCACGCGAAGCAGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 1:2861100/1‑100 CCTGGCGGACTGCTGCCGTCAGGACAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCT > 2:651007/1‑100 CAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCG < 1:2195865/96‑1 GTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCC < 2:1419888/100‑1 GTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCC > 2:1322756/1‑100 TCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCA < 1:2435602/100‑1 CAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCTCCCGTCAGCTCGCTAAGTTGCCCAATGCGCATTTCCAG < 2:1871633/100‑1 CAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAG < 2:2778358/100‑1 CAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAG < 1:854025/100‑1 CAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTACCCATTGCGCATTTCCAG < 2:601953/100‑1 AGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGC < 2:1060237/100‑1 AGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAG > 1:1038262/1‑99 CTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAATATTACGACGCTGACCTGGCGGACTGCTGCCGTCAGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2307037‑2306932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGC > NC_000913/2306961‑2307059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |