New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2306932 =104 (0.960)17 (0.170) 7/164 NT 15.7% intergenic (‑178/+40) mqo/yojI malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase
?NC_000913 2306961 = 87 (0.870)intergenic (‑207/+11) mqo/yojI malate dehydrogenase, FAD/NAD(P)‑binding domain/microcin J25 efflux ABC transporter permease/ATPase

Only 100 of 144 total aligned reads displayed.

AATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGC  >  NC_000913/2306862‑2307059
                                                                                                   |                                                                                                  
agctgacgggcgaagagcgcgatgccgcttcgcgtgatgccgttgcccggacggcataatattacgacgcTGACCTGACGGCAGCAGTCCGCCAGGTCAg                                                                                                    >  2:302300‑M1/71‑100 (MQ=255)
agctgacgggcgaagagcgcgatgccgcttcgcgtgatgccgttgcccggacggcataatattacgacgcTGACCTGACGGCAGCAGTCCGCCAGGTCAg                                                                                                    >  1:1848205‑M1/71‑100 (MQ=255)
aaTTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAg                                                                                                    >  1:1932417/1‑100 (MQ=255)
    ttAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGcgtc                                                                                                <  1:2183432/100‑1 (MQ=255)
    gacgggcgaagagcgcgatgccgcttcgcgtgatgccgttgcccggacggcataatattacgacgcTGACCTGACGGCAGCAGTCCGCCAGGTCAGcgtc                                                                                                >  2:767545‑M1/67‑100 (MQ=255)
      aGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGTGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGcgtcgt                                                                                              <  2:1226399/100‑1 (MQ=255)
      aGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGcgtcgt                                                                                              >  2:809528/1‑100 (MQ=255)
       gAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTa                                                                                             >  1:2383922/1‑100 (MQ=255)
        aaaCATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTaa                                                                                            <  1:2872537/100‑1 (MQ=255)
        aaaCATTATAATTTCGTTGATTAATTATAGGGTTATCAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTaa                                                                                            <  1:2128666/100‑1 (MQ=255)
          aCATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAata                                                                                          <  2:2363594/100‑1 (MQ=255)
           cATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAATGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAatat                                                                                         <  1:932211/100‑1 (MQ=255)
             ttATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAAtatta                                                                                       <  1:2495348/100‑1 (MQ=255)
               ataATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATg                                                                                     <  1:1118440/100‑1 (MQ=255)
                taATTTTGTTGATTAATTATAGGGTTATTAGAAATGAATGGATTTTTAGCATATTGATCTGAGGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGc                                                                                    <  1:1147631/100‑1 (MQ=255)
                taATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGc                                                                                    <  1:2422272/100‑1 (MQ=255)
                  aTTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCg                                                                                  >  2:2717765/1‑100 (MQ=255)
                  aTTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCAAGGTCAGCGTCGTAAtattat                                                                                      >  1:1488451/1‑96 (MQ=255)
                   tcttccgatctaattaTAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGt                                                                                 <  1:878291/90‑1 (MQ=255)
                     tCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGTTCAGCGTCGTAATATTATGCCGTc                                                                                >  1:606526/1‑99 (MQ=255)
                     tCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTcc                                                                               <  1:2196453/100‑1 (MQ=255)
                     tCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGACAGCAGTCCGCCAAGTCAGCGTCGTAATATTATGCCGTcc                                                                               >  1:2092641/1‑100 (MQ=255)
                      cGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCg                                                                              <  2:1453796/100‑1 (MQ=255)
                       gTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTTAGCGACGTAATATTATGCCGTCCgg                                                                             >  1:1031527/1‑100 (MQ=255)
                         tGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGc                                                                           >  2:326448/1‑100 (MQ=255)
                         tGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGc                                                                           <  1:3020334/100‑1 (MQ=255)
                          gATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCa                                                                          >  1:1871655/1‑100 (MQ=255)
                           attaattaTAGGGTTATTAGAAATGAAGGGATTCTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCGGTCCGGGCaa                                                                         >  2:1996511/1‑100 (MQ=255)
                            ttaattaTAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAAc                                                                        >  1:2609460/1‑100 (MQ=255)
                             taattaTAGGGTTATTAGAAATGAAGAGATTTTTTTCATATTTATTTGTCGGCAGCAGTCCGCTAGGTCAGCGTCGTAATATTGTGCCGTCCgggt                                                                           <  2:1040928/96‑2 (MQ=255)
                              aattaTAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACgg                                                                      >  1:1140912/1‑100 (MQ=255)
                                ttaTAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCa                                                                    <  2:867857/100‑1 (MQ=255)
                                 tataGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCAt                                                                   <  1:916586/100‑1 (MQ=255)
                                  ataGGGTTATTAGAAATGAAGGGATATTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTAAGCGTCGTCATATTATGCCGTCCGGGCAACg                                                                       >  2:228646/1‑95 (MQ=255)
                                     gggTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcg                                                               >  1:1595203/1‑100 (MQ=255)
                                     gggTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGAAATATTATGCCGTCCGGGCAACGGCATCAcg                                                               >  1:237772/1‑100 (MQ=255)
                                      ggTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcgc                                                              >  1:1018758/1‑100 (MQ=255)
                                      ggTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcgc                                                              >  2:693024/1‑100 (MQ=255)
                                      ggTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCAcgc                                                              >  1:1661609/1‑100 (MQ=255)
                                          attaGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAg                                                          >  2:2648088/1‑100 (MQ=255)
                                           ttaTAAATGAATGTATTTTTAGCATATTGACCTGACGGAAGCAGTCCGCAAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGc                                                         <  1:744346/100‑1 (MQ=255)
                                             aGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGTCAGGTCAGCGCCGTAATATTATGCCGTCCGTGCAACGGCCTCACGCGAAg                                                          >  2:2795556/1‑97 (MQ=255)
                                              gAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGc                                                      >  1:2718960/1‑100 (MQ=255)
                                              gAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGc                                                      <  2:657892/100‑1 (MQ=255)
                                                     aGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCgcgc                                               <  1:15679/100‑1 (MQ=255)
                                                     aGGGATTTTTAGCATATTGACCTGAAGGCAGCAGTCCGCCAGGTCAGCGTTGTAATATTATGCCGTCCGGGCAATGGTATCACGCGAAGCGGCATCgcgc                                               <  2:1881126/100‑1 (MQ=255)
                                                      gggATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGct                                              <  2:179393/100‑1 (MQ=255)
                                                        gATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCgcgc                                               >  1:2506514/1‑97 (MQ=255)
                                                          tttttAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTc                                          <  2:1597607/100‑1 (MQ=255)
                                                          tttttAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCAGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTc                                          >  1:966308/1‑100 (MQ=255)
                                                               aGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCg                                     <  1:2243899/100‑1 (MQ=255)
                                                               aGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCg                                     <  2:1338673/100‑1 (MQ=255)
                                                                gCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGt                                    <  1:480734/100‑1 (MQ=255)
                                                                 gacgctgacctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTc                                   >  2:767545‑M2/35‑100 (MQ=255)
                                                                 cATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTc                                   <  1:1634638/100‑1 (MQ=255)
                                                                   tatTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTc                                   >  2:2520732/1‑98 (MQ=255)
                                                                    gctgacctggcggactgctgccgtcaggtcaGCGTCTTAATATTATGCCGTCCGGGCAACGGCATCAAGCGAAGCGGCATCGGGATCTTCACCAGTCAGc                                >  1:1210071‑M2/32‑100 (MQ=255)
                                                                    atTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATGTTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGc                                >  2:1653294/1‑100 (MQ=255)
                                                                     ttGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCt                               >  2:2019079/1‑100 (MQ=255)
                                                                     ctgacctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCt                               >  1:1848205‑M2/31‑100 (MQ=255)
                                                                     ctgacctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCt                               >  2:302300‑M2/31‑100 (MQ=255)
                                                                      tgacctggcggactgctgccgtcaggtcaGCGTCGTACTATTATGCCGTCCGCGCCACGACATCACGCGACGCGGCATCGCGCTCTTCTCCCGTCAGCTc                              >  1:2974378‑M2/30‑100 (MQ=255)
                                                                      TGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTc                              <  1:1768032‑M1/100‑1 (MQ=255)
                                                                      TGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTc                              >  1:678683‑M1/1‑100 (MQ=255)
                                                                      TGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTc                              <  1:2186703‑M1/100‑1 (MQ=255)
                                                                      TGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTc                              >  2:52687‑M1/1‑100 (MQ=255)
                                                                       GACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCg                             <  2:817571‑M1/100‑1 (MQ=255)
                                                                       GACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCg                             <  2:350455‑M1/100‑1 (MQ=255)
                                                                       GACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCg                             <  2:2393509‑M1/100‑1 (MQ=255)
                                                                        acctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGc                            >  1:1362743‑M2/28‑100 (MQ=255)
                                                                        ACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCACGTCAGCTCGc                            <  2:590648‑M1/100‑1 (MQ=255)
                                                                         cctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           >  2:1843671‑M2/27‑100 (MQ=255)
                                                                         cctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           >  1:1720572‑M2/27‑100 (MQ=255)
                                                                         cctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           >  1:1720525‑M2/27‑100 (MQ=255)
                                                                         cctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCGGACAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGc                            >  1:564873‑M2/27‑99 (MQ=255)
                                                                         cctggcggactgctgccgtcaggtcaGCGTCGTAATATTATGCCGTCCAGGCAACGGCATCACGCGAAGCAGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           >  1:2861100‑M2/27‑100 (MQ=255)
                                                                         cctggcggactgctgccgtcaggacaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           >  2:651007‑M2/27‑100 (MQ=255)
                                                                         CCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCt                           <  2:2533026‑M1/100‑1 (MQ=255)
                                                                           TGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCACTCTTCGCCCGTCAGCTCGCTaa                         <  2:2208907‑M1/100‑1 (MQ=255)
                                                                              cGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGtt                      >  2:1405213/1‑100 (MQ=255)
                                                                                gcagcaGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGc                    <  2:865395/100‑1 (MQ=255)
                                                                                gcagcaGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGc                    <  1:2360746/100‑1 (MQ=255)
                                                                                 cagcagTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAGGTTGcc                   <  2:2271573/100‑1 (MQ=255)
                                                                                 cagcagTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc                   >  2:1213175/1‑100 (MQ=255)
                                                                                 cagcagTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGcc                   >  2:282508/1‑100 (MQ=255)
                                                                                  agcagTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCCAAGCAGCATACCGCACTTCGCCCTTCAGCTCGCTAAGTTGcct                  <  2:248237/100‑2 (MQ=255)
                                                                                    cagTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCAt                <  1:2727301/100‑1 (MQ=255)
                                                                                      gTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTg              >  1:703376/1‑100 (MQ=255)
                                                                                        ccGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTgcg            >  1:1099502/1‑100 (MQ=255)
                                                                                        ccGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTgcg            <  2:1784369/100‑1 (MQ=255)
                                                                                          gCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCa          <  1:875545/100‑1 (MQ=255)
                                                                                           ccAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCa          <  2:2383895/99‑1 (MQ=255)
                                                                                               gtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTcc     <  2:1419888‑M2/96‑1 (MQ=255)
                                                                                               gtcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTcc     >  2:1322756‑M2/5‑100 (MQ=255)
                                                                                                tcaGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCa    <  1:2435602‑M2/97‑1 (MQ=255)
                                                                                                 caGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCTCCCGTCAGCTCGCTAAGTTGCCCAATGCGCATTTCCAg   <  2:1871633‑M2/98‑1 (MQ=255)
                                                                                                 caGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAg   <  1:854025‑M2/98‑1 (MQ=255)
                                                                                                 caGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAg   <  2:2778358‑M2/98‑1 (MQ=255)
                                                                                                  aGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAg   >  1:1038262‑M2/2‑99 (MQ=255)
                                                                                                  aGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGc  <  2:1060237‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
AATTTTAGAAACATTATAATTTCGTTGATTAATTATAGGGTTATTAGAAATGAAGGGATTTTTAGCATATTGACCTGACGGCAGCAGTCCGCCAGGTCAGCGTCGTAATATTATGCCGTCCGGGCAACGGCATCACGCGAAGCGGCATCGCGCTCTTCGCCCGTCAGCTCGCTAAGTTGCCCATTGCGCATTTCCAGC  >  NC_000913/2306862‑2307059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.