New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4638329110 (1.020)5 (0.050) 4/168 NT 4.3% coding (152/1353 nt) creD inner membrane protein
?NC_000913 = 4638348 117 (1.150)coding (171/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 145 total aligned reads displayed.

GCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638231‑4638428
                                                                                                  |                                                                                                   
gCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCggg                                                                                                    >  1:1454630/1‑100 (MQ=255)
   gttgttGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 >  1:1545757/1‑100 (MQ=255)
   gttgttGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 <  2:188731/100‑1 (MQ=255)
    ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGc                                                                                                >  1:772558/1‑100 (MQ=255)
     tgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCa                                                                                               <  2:531643/100‑1 (MQ=255)
        tgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            >  1:2212192/1‑100 (MQ=255)
           ttCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACt                                                                                         >  1:478915/1‑100 (MQ=255)
             ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCg                                                                                       >  1:2627501/1‑100 (MQ=255)
               gATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGtt                                                                                     <  2:1189939/100‑1 (MQ=255)
                     gCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCGAAAAAACTCGTTGGGccg                                                                               <  2:973887‑M2/100‑4 (MQ=255)
                      cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgc                                                                              <  2:1825983‑M1/100‑24 (MQ=255)
                      cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              <  2:1978308‑M2/100‑5 (MQ=255)
                      cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              <  1:2431150‑M2/100‑5 (MQ=255)
                        gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                            >  2:190625/1‑100 (MQ=255)
                         aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctgg                                                                           <  1:1504876‑M1/100‑27 (MQ=255)
                         aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctgg                                                                           <  1:1346848‑M1/100‑27 (MQ=255)
                         aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCa                                                                           <  2:2559080/100‑1 (MQ=255)
                          ttCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCAt                                                                          <  1:64096/100‑1 (MQ=255)
                               cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                     <  1:263051/100‑1 (MQ=255)
                                 ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                   >  1:875549/1‑100 (MQ=255)
                                 ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                   <  2:1368177/100‑1 (MQ=255)
                                  gTGATTGTCGAACGTTCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCCCAAAAAATCGTTGGGCGGGTAATAGCTATTc                                                                  >  2:2762139/1‑100 (MQ=255)
                                   tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                 <  2:2729732/100‑1 (MQ=255)
                                    gATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCt                                                                >  2:1983907/1‑100 (MQ=255)
                                     aTTGTCGAACGTGCGGTTTACCGTCGCGATGTGGAAGATGCGATTCGCCAAAGTTCCATCGTGCCGCAAAAACTCGTTGGGTCGCTCATCGCTATTcc                                                                 <  2:2949569/98‑1 (MQ=255)
                                      ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgt                                                              >  1:1619559/1‑100 (MQ=255)
                                      ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTAACAGCGGGCCGCAAAAACTCGTTGGGCAGCTCATCGCTATTCCtgt                                                              >  1:2504300/1‑100 (MQ=255)
                                       tGTCGAACGTGCTGATTACCGTCGCGAGGTGGATGATGCGATTCCCCAAAGTACAAGCGGGCCGCAAAAACTCGTTGGGCAGCTCATCGCTATTCCtgtg                                                             >  1:1499119/1‑100 (MQ=255)
                                       tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                             <  1:194072/100‑1 (MQ=255)
                                        gTCGAACGTGTTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGTGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                             <  1:2696128/99‑1 (MQ=255)
                                        gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctggtactttggcgaatcg                                                            <  1:1456322‑M1/100‑42 (MQ=255)
                                        gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                            >  1:1929192/1‑100 (MQ=255)
                                                tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    <  2:2336638/100‑1 (MQ=255)
                                                tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    >  1:511840/1‑100 (MQ=255)
                                                  cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCTAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                  <  1:1678211/100‑1 (MQ=255)
                                                  cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    <  2:1659116/98‑1 (MQ=255)
                                                    gATTACCGTAGCGATGTGGAAGATGCGATTCGCTAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                <  1:1169870/100‑1 (MQ=255)
                                                    gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                >  1:2863630/1‑100 (MQ=255)
                                                     aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACCCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                               <  1:2120801/100‑1 (MQ=255)
                                                     aTTACCGTAGCGATGTGGAAGATGCGATTCGCAAAAGTACCAGCGGTCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                               >  2:2984846/1‑100 (MQ=255)
                                                       tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAcag                                             >  1:1561172/1‑98 (MQ=255)
                                                       tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                             <  1:3016113/100‑1 (MQ=255)
                                                        aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                            >  1:2782521/1‑100 (MQ=255)
                                                        aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                            <  1:2786973/100‑1 (MQ=255)
                                                         ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                           >  2:141845/1‑100 (MQ=255)
                                                         ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                           >  1:174635/1‑100 (MQ=255)
                                                          cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                          <  2:174633/100‑1 (MQ=255)
                                                          cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                          <  2:534791/100‑1 (MQ=255)
                                                          cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                          <  2:1619540/100‑1 (MQ=255)
                                                           gTAGCGATGTGGAAGATGCGATTCGCCAAATTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCa                                         <  1:85754/100‑1 (MQ=255)
                                                           gTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                          <  1:2064993/99‑1 (MQ=255)
                                                            tAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                        >  2:780107/1‑100 (MQ=255)
                                                             aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                       <  2:2428218/100‑1 (MQ=255)
                                                              gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                      <  1:204955/100‑1 (MQ=255)
                                                              gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                      >  1:1018443/1‑100 (MQ=255)
                                                              gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                      <  2:1452059/100‑1 (MQ=255)
                                                              gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCACTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                      >  1:1375637/1‑100 (MQ=255)
                                                               cGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGaa                                     >  2:2506397/1‑100 (MQ=255)
                                                                  tgtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAATCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagag                                  <  1:2431411/100‑1 (MQ=255)
                                                                   gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 <  1:2580919/100‑1 (MQ=255)
                                                                   gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGCGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 >  2:2992076/1‑100 (MQ=255)
                                                                   gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACGCGTTGGGCCGCTCATAGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGaa                                     >  2:706396/1‑96 (MQ=255)
                                                                     ggAAGATGCGATTCGCCAACGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTATGACCGAGCTTTATACGGTGCAGGAAGAGGa                                >  1:683693/1‑99 (MQ=255)
                                                                     ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                               <  1:2208285/100‑1 (MQ=255)
                                                                       aaGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                             <  2:251291/100‑1 (MQ=255)
                                                                       aaGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                             >  1:1026462/1‑100 (MQ=255)
                                                                        aGATGCGATTCGCCAAAGTACCAGCGGGCAGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                             <  1:2882813/99‑1 (MQ=255)
                                                                            gcaaTTCGCCAAAGTACGAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTACTGTGACCGAGCTTTATACGTTGTATGAATAGGATAAAAc                          <  2:36001/95‑1 (MQ=255)
                                                                            gCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCg                        <  2:2908780/100‑1 (MQ=255)
                                                                             cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                       <  2:2746592/100‑1 (MQ=255)
                                                                              gATTCGCCAAAGTACTAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                      >  2:365434/1‑100 (MQ=255)
                                                                              gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                      <  2:1626450/100‑1 (MQ=255)
                                                                              gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                      <  1:2002400/100‑1 (MQ=255)
                                                                               aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                     <  2:772554/100‑1 (MQ=255)
                                                                               aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACAGTGCAGAAAAAGGATAAAACCGTg                      >  1:603155/1‑99 (MQ=255)
                                                                                  cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                  <  1:88695/100‑1 (MQ=255)
                                                                                  cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGAACAGGAAGAGGATAAAACCGTGGAGc                  >  1:1951100/1‑100 (MQ=255)
                                                                                   gCCAACGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGcgcg                 >  2:2628878/1‑100 (MQ=255)
                                                                                   gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 <  1:1372965/100‑1 (MQ=255)
                                                                                   gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 >  2:589469/1‑100 (MQ=255)
                                                                                   gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 <  1:188030/100‑1 (MQ=255)
                                                                                        aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc            <  1:559212/100‑1 (MQ=255)
                                                                                        aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc            <  2:1793034/100‑1 (MQ=255)
                                                                                        aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc            <  2:167785/100‑1 (MQ=255)
                                                                                           aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaa         <  1:384729‑M2/100‑74 (MQ=255)
                                                                                            ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat        <  1:1504876‑M2/100‑75 (MQ=255)
                                                                                            ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg        <  1:190627/100‑1 (MQ=255)
                                                                                             cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt       <  2:1883530/100‑1 (MQ=255)
                                                                                              aGCGGcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatca      <  1:2744342‑M1/100‑96 (MQ=255)
                                                                                              aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtt      <  1:2119848/100‑1 (MQ=255)
                                                                                               gCGGcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcag     <  1:2431150‑M1/100‑97 (MQ=255)
                                                                                               gCGGcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcag     <  1:2981528‑M1/100‑97 (MQ=255)
                                                                                               gCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcag     <  2:1825983‑M2/100‑78 (MQ=255)
                                                                                                cGGcccaacgagttttttcggcccgcttgtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcagc    <  2:973887‑M1/100‑98 (MQ=255)
                                                                                                 gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAATCCGTGGAGCGGAAACGAAGTTTTa   <  2:912118/100‑1 (MQ=255)
                                                                                                 gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTa   <  2:456403/100‑1 (MQ=255)
                                                                                                  ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTTTGACCTAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  <  1:38135/100‑1 (MQ=255)
                                                                                                  ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTTTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  <  1:919021/100‑1 (MQ=255)
                                                                                                  ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  >  1:1252484/1‑100 (MQ=255)
                                                                                                  gcccaacgagtttttgcggcccgctggtactttggcgaatcgcatcttccacatcgctactgtaatcagcactttcgacaatcacctgccgaatcagca   >  2:95772‑M1/1‑1 (MQ=255)
                                                                                                  |                                                                                                   
GCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638231‑4638428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.