New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4638329110 (1.020)5 (0.050) 4/168 NT 4.3% coding (152/1353 nt) creD inner membrane protein
?NC_000913 = 4638348 117 (1.150)coding (171/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 149 total aligned reads displayed.

TGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638251‑4638447
                                                                                                 |                                                                                                   
tGCTGATTCGGCAGGTGATTGTCGAAAGTGCTGATTACAGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGc                                                                                                    >  2:95772‑M2/1‑98 (MQ=255)
 gCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCGAAAAAACTCGTTGGGccg                                                                                                  <  2:973887‑M2/100‑4 (MQ=255)
  cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                                                 <  1:2981528‑M2/100‑5 (MQ=255)
  cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                                                 <  1:2431150‑M2/100‑5 (MQ=255)
  cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                                                 <  2:1978308‑M2/100‑5 (MQ=255)
    gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                               >  2:190625/1‑100 (MQ=255)
    gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGACGCAAAAACTCGTTGGGCCGCTc                                                                                               <  2:245449/100‑1 (MQ=255)
     aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCa                                                                                              <  2:2559080/100‑1 (MQ=255)
      ttCGGCCGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGTGCCGCAAAAACTCGTTGGGCCGCTCAt                                                                                             <  2:1701486/100‑1 (MQ=255)
      ttCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCAt                                                                                             <  1:64096/100‑1 (MQ=255)
       tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                                            <  1:1198868/100‑1 (MQ=255)
       tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                                            <  1:1693221/100‑1 (MQ=255)
        cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                           >  1:1936662/1‑100 (MQ=255)
           cAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTa                                                                                        <  1:263051/100‑1 (MQ=255)
             ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                                      <  2:1368177/100‑1 (MQ=255)
              gTGATTGTCGAACGTTCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCCCAAAAAATCGTTGGGCGGGTAATAGCTATTc                                                                                     >  2:2762139/1‑100 (MQ=255)
               tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    <  2:2729732/100‑1 (MQ=255)
                 aTTGTCGAACGTGCGGTTTACCGTCGCGATGTGGAAGATGCGATTCGCCAAAGTTCCATCGTGCCGCAAAAACTCGTTGGGTCGCTCATCGCTATTcc                                                                                    <  2:2949569/98‑1 (MQ=255)
                  ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCgn                                                                                          <  2:1643295/91‑2 (MQ=255)
                  ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgt                                                                                 >  1:1619559/1‑100 (MQ=255)
                  ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTAACAGCGGGCCGCAAAAACTCGTTGGGCAGCTCATCGCTATTCCtgt                                                                                 >  1:2504300/1‑100 (MQ=255)
                    gTCGAACGTGTTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGTGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  1:2696128/99‑1 (MQ=255)
                    gTCGAACGTGCTGGTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                               >  1:868607/1‑100 (MQ=255)
                    gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGa                                                                               >  1:1929192/1‑100 (MQ=255)
                     tCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAc                                                                              >  1:1883552/1‑100 (MQ=255)
                        aaCGTGCTGATTACCGTAGTGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGTGCCGCAAAAACTCGTTGTGCCGCTCATCGCTATTCCTGTGACCg                                                                            <  2:426956/99‑1 (MQ=255)
                            tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  1:511840/1‑100 (MQ=255)
                            tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       <  2:2336638/100‑1 (MQ=255)
                              cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       <  2:1659116/98‑1 (MQ=255)
                                gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                                   >  1:2863630/1‑100 (MQ=255)
                                 aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACCCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                  <  1:2120801/100‑1 (MQ=255)
                                 aTTACCGTAGCGATGTGGAAGATGCGATTCGCAAAAGTACCAGCGGTCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                  >  2:2984846/1‑100 (MQ=255)
                                   tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAcag                                                                >  1:1561172/1‑98 (MQ=255)
                                    aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               >  1:2782521/1‑100 (MQ=255)
                                    aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               <  1:2786973/100‑1 (MQ=255)
                                    aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               >  2:858759/1‑100 (MQ=255)
                                     ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                              >  2:141845/1‑100 (MQ=255)
                                     ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                              >  1:174635/1‑100 (MQ=255)
                                      cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             <  2:534791/100‑1 (MQ=255)
                                      cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             <  2:1619540/100‑1 (MQ=255)
                                       gTAGCGATGTGGAAGATGCGATTCGCCAAATTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCa                                                            <  1:85754/100‑1 (MQ=255)
                                       gTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             <  1:2064993/99‑1 (MQ=255)
                                          gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         <  1:204955/100‑1 (MQ=255)
                                          gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         >  1:1393213/1‑100 (MQ=255)
                                          gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         >  1:1018443/1‑100 (MQ=255)
                                           cGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGaa                                                        >  2:2506397/1‑100 (MQ=255)
                                             aTGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAaga                                                      <  2:2307002/100‑1 (MQ=255)
                                              tgtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAATCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagag                                                     <  1:2431411/100‑1 (MQ=255)
                                               gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    <  1:2580919/100‑1 (MQ=255)
                                               gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTAATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  1:89496/1‑100 (MQ=255)
                                               gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGCGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  2:2992076/1‑100 (MQ=255)
                                               gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACGCGTTGGGCCGCTCATAGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGaa                                                        >  2:706396/1‑96 (MQ=255)
                                                 ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  <  1:2208285/100‑1 (MQ=255)
                                                 ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  >  2:253028/1‑100 (MQ=255)
                                                   aaGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                                                >  1:1026462/1‑100 (MQ=255)
                                                        gcaaTTCGCCAAAGTACGAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTACTGTGACCGAGCTTTATACGTTGTATGAATAGGATAAAAc                                             <  2:36001/95‑1 (MQ=255)
                                                        gCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCg                                           <  2:2908780/100‑1 (MQ=255)
                                                         cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgac                                          <  1:1456322‑M2/100‑60 (MQ=255)
                                                          gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         <  2:1626450/100‑1 (MQ=255)
                                                          gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         <  1:2002400/100‑1 (MQ=255)
                                                          gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAAGGTGCAGGAAGAGGATAAAACCGTg                                         >  2:2650489/1‑100 (MQ=255)
                                                           aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                        <  2:772554/100‑1 (MQ=255)
                                                           aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACAGTGCAGAAAAAGGATAAAACCGTg                                         >  1:603155/1‑99 (MQ=255)
                                                              cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     <  1:88695/100‑1 (MQ=255)
                                                              cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGAACAGGAAGAGGATAAAACCGTGGAGc                                     >  1:1951100/1‑100 (MQ=255)
                                                               gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    <  1:1372965/100‑1 (MQ=255)
                                                               gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    >  2:589469/1‑100 (MQ=255)
                                                               gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    <  1:188030/100‑1 (MQ=255)
                                                               gCCAAAGTACCAGCGGGACGCAAAAATTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAACGTGGAGc                                     >  2:1879577/1‑99 (MQ=255)
                                                                    aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc                               <  2:1793034/100‑1 (MQ=255)
                                                                    aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc                               <  1:559212/100‑1 (MQ=255)
                                                                        ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  1:1504876‑M2/100‑75 (MQ=255)
                                                                        ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  1:1346848‑M2/100‑75 (MQ=255)
                                                                          aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtt                         <  1:2119848/100‑1 (MQ=255)
                                                                           gCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcag                        <  2:1825983‑M2/100‑78 (MQ=255)
                                                                             gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTa                      >  1:2280692/1‑100 (MQ=255)
                                                                              ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTTTGACCTAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                     <  1:38135/100‑1 (MQ=255)
                                                                              ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTTTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                     <  1:919021/100‑1 (MQ=255)
                                                                              ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                     >  1:1252484/1‑100 (MQ=255)
                                                                               gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGGAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                    <  2:2863598/100‑1 (MQ=255)
                                                                               gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                    >  1:44652/1‑100 (MQ=255)
                                                                                ccGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                   >  2:1816874/1‑100 (MQ=255)
                                                                                  gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                 >  2:754410/1‑100 (MQ=255)
                                                                                   cAAAATCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtt                <  1:2957513/100‑1 (MQ=255)
                                                                                     aaaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtttt              >  1:1547292/1‑100 (MQ=255)
                                                                                       aaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg            <  1:1608884/100‑1 (MQ=255)
                                                                                       aaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg            <  2:3000204/100‑1 (MQ=255)
                                                                                        aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:868602/100‑1 (MQ=255)
                                                                                         cTCGTTGGGCCGCTCATCGCTATTCTTGTGACCGATCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  1:902190/99‑1 (MQ=255)
                                                                                         cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGATCTTTATTCGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          <  1:318862/100‑1 (MQ=255)
                                                                                           cGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        >  1:427184/1‑100 (MQ=255)
                                                                                            gTTGGGCCGCTCATCGCTATTCCTGTGACCGTGCTTTATACGGTGTAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAc       <  1:111863/100‑1 (MQ=255)
                                                                                            gTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAc       >  1:610708/1‑100 (MQ=255)
                                                                                             ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc      >  1:2442456/1‑100 (MQ=255)
                                                                                               gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    >  1:1512250/1‑100 (MQ=255)
                                                                                               gggCCGCTCATCGCTATTCCTGTGACCAAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    <  2:170711/100‑1 (MQ=255)
                                                                                                ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGa   >  1:2154576/1‑100 (MQ=255)
                                                                                                ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGa   >  1:279794/1‑100 (MQ=255)
                                                                                                 gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  2:394805/1‑100 (MQ=255)
                                                                                                 gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  2:512229/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
TGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638251‑4638447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.