New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2304654 =NA (NA)8 (0.080) 4/164 NT 100% noncoding (238/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 2304670 = 0 (0.000)noncoding (254/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

GCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCC  >  NC_000913/2304555‑2304750
                                                                                                   |                                                                                                
gcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATa                                                                                                  >  1:1021433/1‑100 (MQ=33)
 naTCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATaa                                                                                                 >  2:1622338/2‑100 (MQ=18)
  aTCCGACATCCAACGCCCTAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAg                                                                                                <  2:799729/100‑1 (MQ=17)
   tCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAg                                                                                                <  2:985591/99‑1 (MQ=32)
    ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc                                                                                              <  2:498242/100‑1 (MQ=33)
    ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc                                                                                              >  1:506575/1‑100 (MQ=33)
    ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc                                                                                              >  1:506573/1‑100 (MQ=33)
    ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGc                                                                                              <  1:2473346/100‑1 (MQ=32)
    ccGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGCATAAGGc                                                                                              <  1:1586983/100‑1 (MQ=18)
     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                                                                                             <  1:833504/100‑1 (MQ=32)
     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                                                                                             >  2:407976/1‑100 (MQ=33)
     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                                                                                             >  2:2040359/1‑100 (MQ=33)
     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                                                                                             >  1:2277334/1‑100 (MQ=33)
      gACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  2:1114368/100‑1 (MQ=17)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  2:938938/100‑1 (MQ=32)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  2:27344/100‑1 (MQ=33)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  1:2000751/100‑1 (MQ=33)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  2:218777/100‑1 (MQ=33)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  1:2670539/100‑1 (MQ=32)
      gACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                                                            <  2:1289333/100‑1 (MQ=33)
       aCATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt                                                                                           <  1:79425/100‑1 (MQ=32)
        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                                                                                          <  1:1182631/100‑1 (MQ=32)
        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                                                                                          <  2:2705476/100‑1 (MQ=32)
        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                                                                                          <  1:1544379/100‑1 (MQ=33)
        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                                                                                          <  1:352078/100‑1 (MQ=33)
        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGt                                                                                           <  2:502948/99‑1 (MQ=32)
         aTCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTa                                                                                         <  1:394282/100‑1 (MQ=33)
          tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                                                                                          >  2:637922/1‑98 (MQ=33)
          tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc                                                                                        >  2:2601147/1‑100 (MQ=33)
          tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc                                                                                        >  1:2971857/1‑100 (MQ=33)
           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                                                                                       >  2:2633931/1‑100 (MQ=33)
           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcg                                                                                       >  2:585097/1‑100 (MQ=33)
            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgc                                                                                      >  2:2233110/1‑100 (MQ=33)
            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgc                                                                                      >  2:3027606/1‑100 (MQ=33)
            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCCTGGGTGGGATAAGGGGGTTGcg                                                                                       >  2:1804173/1‑99 (MQ=11)
             aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCTCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTActc                                                                                      <  1:2046474/99‑3 (MQ=16)
             aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGGGGTTAcg                                                                                       >  2:2764676/1‑98 (MQ=17)
             aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgcc                                                                                     <  1:956736/100‑1 (MQ=32)
             aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgcc                                                                                     <  1:2206415/100‑1 (MQ=33)
              aCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtca                                                                                         >  2:2922971/1‑93 (MQ=17)
               cGCCCGAGCCGGTTGCCTGATGCGATGTTGTCGTGTCTTATCAGGTTTAAACCGCTGTGAAGTGCGCCACCCCGTAGGTCGGATAAGGCGGTTAcgccg                                                                                    <  1:35164/99‑1 (MQ=11)
               cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGTAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgcc                                                                                     <  2:1867075/98‑1 (MQ=17)
               cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                                                                                   <  2:2134656/100‑1 (MQ=32)
               cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                                                                                   <  2:2542002/100‑1 (MQ=32)
               cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTACTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                                                                                   >  2:1534553/1‑100 (MQ=17)
                gCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                                                                                   >  2:2182319/1‑99 (MQ=31)
                gCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCa                                                                                  >  2:2819543‑M2/1‑99 (MQ=255)
                  ccGCGCCGGTTTTCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCa                                                                                  >  1:2734367‑M2/1‑97 (MQ=255)
                  ccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatc                                                                                >  1:1359399‑M2/1‑97 (MQ=255)
                  ccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatc                                                                                <  1:1794304‑M2/100‑4 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCCCCCCGTAGGTCGGATAAGGCGGTTGCGCCCCatac                                                                               <  2:1638552‑M2/100‑5 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcc                                                                               <  1:800362‑M2/100‑5 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcc                                                                               >  1:2563038‑M2/1‑96 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcc                                                                               >  1:2508156‑M2/1‑96 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcc                                                                               <  2:1811160‑M2/100‑5 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGCGACATGCTCCACCGCGTAGGTCGGATAAGGCGGTTACGACACatcc                                                                               <  2:599852‑M2/100‑5 (MQ=255)
                   cGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTGATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcc                                                                               >  2:1593684‑M2/1‑96 (MQ=255)
                    gtgccGGTTGCCTGTTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccg                                                                              >  1:802674‑M2/3‑95 (MQ=255)
                    gAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTGGGATAAGGCGGTTACGCCGCatccg                                                                              <  2:2708896‑M2/100‑6 (MQ=255)
                     aGCCGGTTGCCTGATGCGACGCTGGCGCGTTTTATCAGGCCTACACCGCTGTGAAGTGATCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccga                                                                             >  1:656364‑M2/1‑94 (MQ=255)
                     aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccga                                                                             >  1:2914870‑M2/1‑94 (MQ=255)
                     aGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccga                                                                             >  1:407979‑M2/1‑94 (MQ=255)
                      ggcggTTGCCTGATGCGGCGCGGGCGCGTCTTATCAGGGCTACACCGCTGTGAAGTGCTTCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgac                                                                            >  2:1642999‑M2/3‑93 (MQ=255)
                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgac                                                                            >  2:2621584‑M2/1‑93 (MQ=255)
                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgac                                                                            >  1:1043390‑M2/1‑93 (MQ=255)
                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccga                                                                             <  2:441485‑M2/99‑7 (MQ=255)
                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatcccac                                                                            <  2:2211245‑M2/100‑8 (MQ=255)
                      gCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAAGCGGTTACGCCGCatccaac                                                                            <  1:2029413‑M2/100‑8 (MQ=255)
                                      ggcgcTGGCGCGTATTATCAGGCCTACACCGATGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcac                                                            <  1:2044607‑M2/98‑24 (MQ=255)
                                                                            gTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtc                      <  2:1142170‑M2/100‑62 (MQ=255)
                                                                              gCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcaaagcggtgtaggcctgataagacgcgccagcgtcgc                    <  1:1151203‑M2/100‑64 (MQ=255)
                                                                                tCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCatccgtcctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcat                  >  1:1142181‑M2/1‑35 (MQ=255)
                                                                                 gcaCCCCGTAGGTCAGACAAGGCGGTCACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatc                 >  2:441039‑M2/2‑34 (MQ=255)
                                                                                          aGGTTGGATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccg        <  1:2126771‑M2/100‑76 (MQ=255)
                                                                                          aGGTTGGATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccg        <  1:1441653‑M2/100‑76 (MQ=255)
                                                                                          aGGTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccg        <  1:497646‑M2/100‑76 (MQ=255)
                                                                                            gTTGGATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggc      <  1:196474‑M2/100‑78 (MQ=255)
                                                                                            gTTGGATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggc      <  2:1069887‑M2/100‑78 (MQ=255)
                                                                                            gTTGGATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcatgataagacgcgccagcgtcgcatcaggcaaccggc      <  1:2130685‑M2/100‑78 (MQ=255)
                                                                                            gTCGGATGAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataaaacgcgccagcgtcgcatcaggcaaccggc      <  1:1594479‑M2/100‑78 (MQ=255)
                                                                                            gTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggc      <  2:2787291‑M2/100‑78 (MQ=255)
                                                                                            gTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggc      <  1:2400897‑M2/100‑78 (MQ=255)
                                                                                            gTCGGATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggc      <  1:1522404‑M2/100‑78 (MQ=255)
                                                                                              tggaTAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctt    <  1:1534571‑M2/99‑80 (MQ=255)
                                                                                               ngaTAAGGCGGTTACGCCGCatccaacctacggggtggagcccttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcacgcaacc         <  2:2453184‑M2/93‑75 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggcttg   <  1:1248807‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcg   <  1:2413178‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcg   <  1:2968328‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcg   <  2:184824‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcgatgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcg   <  1:2382400‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggcttg   <  1:683069‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggcttg   <  1:1705223‑M2/100‑81 (MQ=255)
                                                                                               ggATAAGGCGGTTACGCCGCatccaacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggcttg   <  1:1210188‑M2/100‑81 (MQ=255)
                                                                                                gATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcgg  <  2:2180606‑M2/100‑82 (MQ=255)
                                                                                                gATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcgg  <  2:239542‑M2/100‑82 (MQ=255)
                                                                                                gATAAGGCGGTTACGCCGCatccgacctacggggtggagcacttcacagcggtgtaggcctgataagacgcgccagcgtcgcatcaggcaaccggctcgg  <  2:962596‑M2/100‑82 (MQ=255)
                                                                                                   |                                                                                                
GCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCC  >  NC_000913/2304555‑2304750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.