New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2617939 =NA (NA)7 (0.070) 5/164 NT NA intergenic (+2/+136) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation
?NC_000913 2617967 = NA (NA)intergenic (+30/+108) yfgD/hda putative oxidoreductase/ATPase regulatory factor involved in DnaA inactivation

Only 100 of 114 total aligned reads displayed.

GATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAT  >  NC_000913/2617868‑2618063
                                                                                                   |                                                                                                
atccaaactacgcgaagttaatccataatatttgtaggccgaataagacgaggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACAtt                                                                                                  >  1:690241‑M1/72‑100 (MQ=255)
  ccgaactacgcgaagttaatccatagtatttgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGc                                                                                                >  1:737277‑M1/70‑100 (MQ=255)
   cgatctacgagaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGcc                                                                                               >  1:220327‑M1/69‑100 (MQ=255)
    gtgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCg                                                                                              >  2:2736080/1‑100 (MQ=255)
    gtgGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGCGCGTTAAAATGTGATCCATCGCTAGTTGAAGCACATTGc                                                                                                >  2:1863288/1‑98 (MQ=255)
     aactacgcgaagttaatccatagtattcgtaggccggataagacgtggcaagcgtcgcatccggcaATGTGCTCCATCGCTAGTTGAAGCACATTGCCgg                                                                                             >  2:1496257‑M1/67‑100 (MQ=255)
      ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGTAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                            <  1:760154/100‑1 (MQ=255)
      ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                            <  1:2334436/100‑1 (MQ=255)
      ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                            >  2:827819/1‑100 (MQ=255)
      ggTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGa                                                                                            <  2:1135366/100‑1 (MQ=255)
       gTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                                           >  2:2554919/1‑100 (MQ=255)
        tCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGATCCATCGCTAGTTGAAGCACATTGCCGGAt                                                                                           >  1:786543/1‑99 (MQ=255)
         cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                                                         <  1:2370440/100‑1 (MQ=255)
         cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                                                         <  2:840751/100‑1 (MQ=255)
         cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGc                                                                                         <  2:2507091/100‑1 (MQ=255)
         cgcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGACGGATg                                                                                          >  1:2846044/1‑99 (MQ=255)
          gcgAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCg                                                                                        <  1:2647057/100‑1 (MQ=255)
              aTGGCAAAGCGCGTATTGGTCGTCCACCGTAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCCCATTGCCGGGTGCGACGc                                                                                    <  2:1907441/100‑1 (MQ=255)
              aTGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTACATAACTAGTTGAAGCACATTGCCGGATGCGAc                                                                                      >  1:1410384/1‑98 (MQ=255)
               tGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCt                                                                                   <  2:1568343/100‑1 (MQ=255)
                ggCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCtt                                                                                  <  2:2489544/100‑1 (MQ=255)
                 gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCtt                                                                                  >  1:2663126/1‑99 (MQ=255)
                 gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                                                 <  1:840839/100‑1 (MQ=255)
                 gCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTg                                                                                 >  1:1317457/1‑100 (MQ=255)
                  cAAAGCGCGGATTGGTCGTCCAGCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGc                                                                                >  2:1760749/1‑100 (MQ=255)
                     aGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCAc                                                                             >  1:2961135/1‑100 (MQ=255)
                      gcgcGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACg                                                                            <  2:2170498/100‑1 (MQ=255)
                       cgcgGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGATAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACACTTGCAACGt                                                                           >  2:2866251/1‑100 (MQ=255)
                               ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                   >  1:1733697/1‑100 (MQ=255)
                               ggTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCg                                                                   >  1:578470/1‑100 (MQ=255)
                                gtcgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCgg                                                                  >  1:166997/1‑100 (MQ=255)
                                  cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGcc                                                                >  1:1182365/1‑100 (MQ=255)
                                  cgtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGc                                                                 >  2:1155192/1‑99 (MQ=255)
                                   gtcCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCt                                                               >  2:2684995/1‑100 (MQ=255)
                                    tcaaCCGGAGCAGATACTGGAAATCGTGGGTTAAGATGTGCTCAATCGCTAGTTGAAGCACATTGACGGATGCGACGCTTGCCACGTCTTATCCg                                                                   >  2:1458154/4‑95 (MQ=38)
                                     ccACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTAc                                                             >  1:1391050/1‑100 (MQ=255)
                                     ccACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTAc                                                             <  2:1413834/100‑1 (MQ=255)
                                      cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                                            >  1:1153647/1‑100 (MQ=255)
                                      cACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACg                                                            >  2:2243733/1‑100 (MQ=255)
                                        ccGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATACGGTCTACGaa                                                          <  2:1587737/100‑1 (MQ=255)
                                          ggAGCAGGTACTGGAAATCGTGGGTTTAGATGTGGTCCATCGCTAGTTGAAGCACATTGCCGTATGCGACTCTTGCCACGTCTTATCCGGCCTACGAAt                                                         <  2:2658439/99‑1 (MQ=38)
                                          ggAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAACACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATa                                                        >  2:451527/1‑100 (MQ=255)
                                             gCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTa                                                     >  2:941904/1‑100 (MQ=255)
                                              cAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTAt                                                    <  2:3025708/100‑1 (MQ=255)
                                               aGGTACTGGAAATCGTGTGTTACTATGTGCTCCATCGCTAGTTGATGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATaa                                                       <  2:1685464/96‑2 (MQ=37)
                                                ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                  <  1:1870305/100‑1 (MQ=255)
                                                ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                  <  1:2022381/100‑1 (MQ=255)
                                                ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                  <  1:2189136/100‑1 (MQ=255)
                                                ggTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATgg                                                  <  1:2232668/100‑1 (MQ=255)
                                                  tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                <  2:2851471/100‑1 (MQ=255)
                                                  tACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAt                                                <  1:2383268/100‑1 (MQ=255)
                                                   aCTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGAtt                                               >  2:1182274/1‑100 (MQ=255)
                                                    cTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTa                                              <  2:299649/100‑1 (MQ=255)
                                                     tGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTaa                                             >  1:2479994/1‑100 (MQ=255)
                                                      ggAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAAc                                            <  1:2560157/100‑1 (MQ=255)
                                                          aTCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                        <  2:395063/100‑1 (MQ=255)
                                                            cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                      >  2:2512454/1‑100 (MQ=255)
                                                            cGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcg                                        >  1:2091359/1‑98 (MQ=255)
                                                             gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                     <  2:2222190/100‑1 (MQ=255)
                                                             gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                     >  1:1180707/1‑100 (MQ=255)
                                                             gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                     >  2:1190881/1‑100 (MQ=255)
                                                             gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                     >  2:131083/1‑100 (MQ=255)
                                                             gTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGCCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGt                                     <  2:1870216/100‑1 (MQ=255)
                                                               gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTcgcg                                      <  2:2192978/97‑1 (MQ=255)
                                                               gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAg                                   >  2:1730951/1‑100 (MQ=255)
                                                               gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAg                                   >  2:1732776/1‑100 (MQ=255)
                                                               gggTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAg                                   >  2:83068/1‑100 (MQ=255)
                                                                 ncggcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGtt                                 >  2:2424787‑M2/35‑100 (MQ=255)
                                                                 gTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGtt                                 >  1:1705935/1‑100 (MQ=255)
                                                                 gTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGtt                                 >  1:1772277/1‑100 (MQ=255)
                                                                 gTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTAGCGTAGtt                                 >  2:618994/1‑100 (MQ=255)
                                                                 ccggcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGtt                                 >  2:1496257‑M2/35‑100 (MQ=255)
                                                                   ggcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGGTTAACTCCGCGTa                                    >  2:1716793‑M2/33‑95 (MQ=255)
                                                                   ggcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCTCGTAGATCg                               >  1:220327‑M2/33‑100 (MQ=255)
                                                                    gcaatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACAAATACTATGGATTAACTTCGCGTAGTTCgg                              >  1:737277‑M2/32‑100 (MQ=255)
                                                                     aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGa                             <  2:2313723/100‑1 (MQ=255)
                                                                     aGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTAGGa                             >  1:2142779/1‑100 (MQ=255)
                                                                      gATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                            <  2:166995/100‑1 (MQ=255)
                                                                      aatgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCTCGTCTTATTCGGCCTACAAATATTATGGATTAACTTCGCGTAGTTTGGAt                            >  1:690241‑M2/30‑100 (MQ=255)
                                                                       atgtgcttcaactagcgatggagcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                           >  1:2286234‑M2/29‑100 (MQ=255)
                                                                       ATGTGCTTCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGAt                            >  1:2825468‑M1/1‑99 (MQ=255)
                                                                       ATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                           >  1:1442220‑M1/1‑100 (MQ=255)
                                                                       ATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                           >  1:789406‑M1/1‑100 (MQ=255)
                                                                       ATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATa                           >  2:786539‑M1/1‑100 (MQ=255)
                                                                          TGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                        >  1:800763‑M1/1‑100 (MQ=255)
                                                                          TGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAgg                        >  2:1182354‑M1/1‑100 (MQ=255)
                                                                           GCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGc                       <  2:2994113‑M1/100‑1 (MQ=255)
                                                                           GCTCCATCGCTAGTTGAAGCACATTGACGGATGCGACGCTTGCCACGTCTTATCCTGCCTACGAATACTATGGATTAACTTCGCGTAGTTAGGATAAGGc                       <  2:2946898‑M1/100‑1 (MQ=255)
                                                                                     tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg             <  1:1494359/100‑1 (MQ=255)
                                                                                     tAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccg             <  2:2228376/100‑1 (MQ=255)
                                                                                      aGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGcgccgc            <  2:2383014/100‑1 (MQ=255)
                                                                                       gTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCa           <  2:578467/100‑1 (MQ=255)
                                                                                       gTTGAAGCACATTGCCGAATGCGACGCTTGCCACGTCTTATCAGGCCTCCGAATACTATGGATTACCTACGCGTAGTTCGGATAAGGCGTTCGCGCCGCa           >  2:538713/1‑100 (MQ=38)
                                                                                          gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATcc        >  2:1342401/1‑100 (MQ=255)
                                                                                          gAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATcc        >  2:371459/1‑100 (MQ=255)
                                                                                             gcacatTGGCGGATGCGACGCTTGCCACGTCTTATCCGGCCTATGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc     <  1:2617149‑M2/94‑1 (MQ=255)
                                                                                             gcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc     >  2:610548‑M2/7‑100 (MQ=255)
                                                                                             gcacatTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGAc     <  1:64559‑M2/94‑1 (MQ=255)
                                                                                                catTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTGCGATAAGGCGTTCGCGCCGCATCCGAc     >  2:960997‑M2/4‑97 (MQ=255)
                                                                                                catTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAt  >  2:902632‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                
GATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAAGATGTGCTCCATCGCTAGTTGAAGCACATTGCCGGATGCGACGCTTGCCACGTCTTATCCGGCCTACGAATACTATGGATTAACTTCGCGTAGTTCGGATAAGGCGTTCGCGCCGCATCCGACAAT  >  NC_000913/2617868‑2618063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.