| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,370,611 | Δ5 bp | intergenic (‑199/‑73) | yjeH ← / → groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4370610 | 3 (0.040) | 62 (0.790) | 52/194 | 0.6 | 95.4% | intergenic (‑198/‑78) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| ? | NC_000913 | 4370616 = | 3 (0.040) | intergenic (‑204/‑72) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL | |||||
GAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATG > NC_000913/4370512‑4370709 | gAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGAGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC < 2:592631‑M1/99‑1 (MQ=255) aaaTGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCac > 1:166143‑M1/1‑98 (MQ=255) aTGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCacca < 1:501574‑M1/100‑5 (MQ=255) tgtgAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccag > 1:984523‑M1/1‑95 (MQ=255) gtgAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCa > 1:180792/1‑100 (MQ=255) aGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgg > 1:1491295‑M1/1‑91 (MQ=255) ggTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccggg < 1:804391‑M1/100‑11 (MQ=255) ggTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgg < 1:1342802‑M1/99‑10 (MQ=255) tGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaa > 1:691534‑M1/1‑88 (MQ=255) gAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaa < 2:70926‑M1/100‑14 (MQ=255) aGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCTTCCACATTTCTCaccagccgggaaaccacg > 1:1783053‑M1/1‑82 (MQ=255) ggTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgta < 2:1004869‑M1/100‑21 (MQ=255) ttttCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaa < 1:1750187‑M1/99‑22 (MQ=255) cACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTTCCCCTTGAAGGGGCGAAGCCACATCCCCATTTCTCaccagccgggaaaccacgtaaac > 1:249752‑M1/1‑74 (MQ=255) aCCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccg > 1:1573358‑M1/1‑73 (MQ=255) cccGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccgg > 2:1819642‑M1/1‑72 (MQ=255) ttttGTGCTGATCAGAATTTTTTTTTTTTTTTTTTCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtc > 1:1910143‑M1/1‑67 (MQ=255) tttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcac < 1:379343‑M1/100‑35 (MQ=255) ttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacc < 2:723612‑M1/100‑36 (MQ=255) tgtgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcaccc > 2:1579710‑M1/1‑64 (MQ=255) gCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccata < 2:1543965‑M1/100‑40 (MQ=255) gCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccata < 2:648096‑M1/100‑40 (MQ=255) tGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataac > 2:1155010‑M1/1‑59 (MQ=255) gATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataaca < 2:1078477‑M1/100‑43 (MQ=255) aTCAGAATTTTTTTTTTTTTTTTCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataaca > 1:1106640‑M1/1‑57 (MQ=255) aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacag < 2:1696055‑M1/100‑44 (MQ=255) aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacag < 2:984524‑M1/100‑44 (MQ=255) aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacag < 2:1407430‑M1/100‑44 (MQ=255) aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacag < 1:87172‑M1/100‑44 (MQ=255) tCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacaga < 2:1693438‑M1/100‑45 (MQ=255) aTTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacgg < 2:1571265‑M1/100‑50 (MQ=255) aTTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacgg < 2:1570696‑M1/100‑50 (MQ=255) aTTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacgg < 2:1463167‑M1/100‑50 (MQ=255) ttttttCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgttacccataacagatacggact < 1:1191570‑M1/100‑53 (MQ=255) ttttttCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggact < 2:1140202‑M1/100‑53 (MQ=255) ttttctttttcCCCCTTGAAGGGACGAAGCCTCATCCCCATTTCTCaccagccgggcaaccacgtaagctccgacgtcacacataacagatacagac > 1:1543757‑M1/1‑46 (MQ=255) tttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttc > 2:885603‑M1/1‑45 (MQ=255) tttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttc < 1:1724354‑M1/100‑56 (MQ=255) ttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttct > 2:512377‑M1/1‑44 (MQ=255) ttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttct < 2:1522936‑M1/100‑57 (MQ=255) tctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctc < 1:878706‑M1/100‑58 (MQ=255) tttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaa > 2:903080‑M1/1‑41 (MQ=255) cccccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagtcgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggag > 2:311502‑M1/1‑36 (MQ=255) cccccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggag > 2:314226‑M1/1‑36 (MQ=255) cccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagag < 2:825271‑M1/100‑67 (MQ=255) aGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaa < 2:639788‑M1/100‑74 (MQ=255) gggCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatg < 2:926496‑M1/100‑76 (MQ=255) ggCGAAGCCTCATCCCCATTTCTCaccagccgggaatccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatga > 2:1369251‑M1/1‑24 (MQ=255) gCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaa > 2:1244841‑M1/1‑23 (MQ=255) gCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagccccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaa < 2:47726‑M1/100‑78 (MQ=255) cGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaat > 1:1744794‑M1/1‑22 (MQ=255) gAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaata > 1:1595575‑M1/1‑21 (MQ=255) gAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaata > 2:652134‑M1/1‑21 (MQ=255) aaGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatat < 2:321235‑M1/100‑81 (MQ=255) aGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatatt > 1:458460‑M1/1‑19 (MQ=255) cTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgt > 1:1370268‑M1/1‑16 (MQ=255) tCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtc < 2:1870595‑M1/100‑86 (MQ=255) cATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtcc > 1:109996‑M1/1‑14 (MQ=255) cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATAtt > 1:392928/1‑100 (MQ=255) tCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccat < 2:1910156‑M1/100‑89 (MQ=255) cccATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattg < 1:1226454‑M1/100‑91 (MQ=255) cATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgca < 1:1575422‑M1/100‑93 (MQ=255) cATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgca < 1:436309‑M1/100‑93 (MQ=255) aTTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgcat < 1:601048‑M1/100‑94 (MQ=255) ttCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgcatg < 1:1915824‑M1/99‑95 (MQ=255) ttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTg < 1:979150/100‑1 (MQ=255) tcaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgcatgatcg < 2:458462‑M1/100‑99 (MQ=255) caccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggcgagttatcaatgaatattcgtccattgcatgatcgc > 1:1812024‑M1/1‑1 (MQ=255) caccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatgaatattcgtccattgcatgatcgc > 2:344828‑M1/1‑1 (MQ=255) | GAAATGTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATG > NC_000913/4370512‑4370709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |