| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,370,611 | Δ5 bp | intergenic (‑199/‑73) | yjeH ← / → groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4370610 | 3 (0.040) | 62 (0.790) | 52/194 | 0.6 | 95.4% | intergenic (‑198/‑78) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| ? | NC_000913 | 4370616 = | 3 (0.040) | intergenic (‑204/‑72) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL | |||||
GTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCG > NC_000913/4370517‑4370715 | gtgAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCa > 1:180792/1‑100 (MQ=255) aaatgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcAc > 1:166143‑M2/99‑100 (MQ=255) atgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCa < 1:501574‑M2/4‑1 (MQ=255) tgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAg > 1:984523‑M2/96‑100 (MQ=255) aggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCgg > 1:1491295‑M2/92‑100 (MQ=255) ggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCggg < 1:804391‑M2/10‑1 (MQ=255) ggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCgg < 1:1342802‑M2/9‑1 (MQ=255) tgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGaa > 1:691534‑M2/89‑100 (MQ=255) gaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGaaa < 2:70926‑M2/13‑1 (MQ=255) agggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcttccacatttctcACCAGCCGGGAAACCACg > 1:1783053‑M2/83‑100 (MQ=255) ggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTa < 2:1004869‑M2/20‑1 (MQ=255) ttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTaa < 1:1750187‑M2/21‑1 (MQ=255) cacccgattttgtgctgatcagaattttttttcttttttccccttgaaggggcgaagccacatccccatttctcACCAGCCGGGAAACCACgtaaac > 1:249752‑M2/75‑95 (MQ=255) acccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCg > 1:1573358‑M2/74‑100 (MQ=255) cccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCgg > 2:1819642‑M2/73‑100 (MQ=255) ttttgtgctgatcagaattttttttttttttttttcttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTc > 1:1910143‑M2/68‑99 (MQ=255) tttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAc < 1:379343‑M2/34‑1 (MQ=255) ttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAcc < 2:723612‑M2/35‑1 (MQ=255) tgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAccc > 2:1579710‑M2/65‑100 (MQ=255) gctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa < 2:1543965‑M2/39‑1 (MQ=255) gctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa < 2:648096‑M2/39‑1 (MQ=255) tgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAAc > 2:1155010‑M2/60‑100 (MQ=255) gatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa < 2:1078477‑M2/42‑1 (MQ=255) atcagaattttttttttttttttcccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa > 1:1106640‑M2/58‑99 (MQ=255) atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAg < 2:984524‑M2/43‑1 (MQ=255) atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAg < 2:1696055‑M2/43‑1 (MQ=255) atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAg < 1:87172‑M2/43‑1 (MQ=255) atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAg < 2:1407430‑M2/43‑1 (MQ=255) tcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGa < 2:1693438‑M2/44‑1 (MQ=255) attttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACgg < 2:1571265‑M2/49‑1 (MQ=255) attttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACgg < 2:1570696‑M2/49‑1 (MQ=255) attttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACgg < 2:1463167‑M2/49‑1 (MQ=255) ttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTTACCCATAACAGATACGGACt < 1:1191570‑M2/52‑1 (MQ=255) ttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACt < 2:1140202‑M2/52‑1 (MQ=255) ttttctttttcccccttgaagggacgaagcctcatccccatttctcACCAGCCGGGCAACCACGTAAGCTCCGACGTCACACATAACAGATACAGAc > 1:1543757‑M2/47‑97 (MQ=255) tttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc < 1:1724354‑M2/55‑1 (MQ=255) tttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc > 2:885603‑M2/46‑100 (MQ=255) ttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtct < 2:1522936‑M2/56‑1 (MQ=255) ttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtct > 2:512377‑M2/45‑100 (MQ=255) tctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtctc < 1:878706‑M2/57‑1 (MQ=255) tttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCaa > 2:903080‑M2/42‑100 (MQ=255) cccccttgaaggggcgaagcctcatccccatttctcACCAGTCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag > 2:311502‑M2/37‑100 (MQ=255) cccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag > 2:314226‑M2/37‑100 (MQ=255) cccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGagag < 2:825271‑M2/66‑1 (MQ=255) aggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCaa < 2:639788‑M2/73‑1 (MQ=255) gggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg < 2:926496‑M2/75‑1 (MQ=255) ggcgaagcctcatccccatttctcACCAGCCGGGAATCCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGa > 2:1369251‑M2/25‑100 (MQ=255) gcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGaa > 2:1244841‑M2/24‑100 (MQ=255) gcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCCCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGaa < 2:47726‑M2/77‑1 (MQ=255) cgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAat > 1:1744794‑M2/23‑100 (MQ=255) gaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAata > 1:1595575‑M2/22‑100 (MQ=255) gaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAata > 2:652134‑M2/22‑100 (MQ=255) aagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAatat < 2:321235‑M2/80‑1 (MQ=255) cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATAtt > 1:392928/1‑100 (MQ=255) agcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATAtt > 1:458460‑M2/20‑100 (MQ=255) ctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGt > 1:1370268‑M2/17‑100 (MQ=255) tcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc < 2:1870595‑M2/85‑1 (MQ=255) catccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTcc > 1:109996‑M2/15‑100 (MQ=255) tccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCAt < 2:1910156‑M2/88‑1 (MQ=255) ttCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTg < 1:979150/100‑1 (MQ=255) cccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTg < 1:1226454‑M2/90‑1 (MQ=255) catttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCa < 1:436309‑M2/92‑1 (MQ=255) catttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCa < 1:1575422‑M2/92‑1 (MQ=255) atttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCAt < 1:601048‑M2/93‑1 (MQ=255) ttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATg < 1:1915824‑M2/94‑1 (MQ=255) tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATcg < 2:458462‑M2/98‑1 (MQ=255) cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGCGAGTTATCAATGAATATTCGTCCATTGCATGATcgc > 1:1812024‑M2/2‑100 (MQ=255) cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATcgc > 2:344828‑M2/2‑100 (MQ=255) aCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGATATCAATGAATACTCGTCCATTGCATGATcgcg > 1:251858/1‑100 (MQ=255) | GTGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATCGCG > NC_000913/4370517‑4370715 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |