| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,242,942 | Δ66 bp | coding (510‑575/891 nt) | malG ← | maltose transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4242941 | 2 (0.020) | 56 (0.750) | 42/184 | 1.1 | 96.7% | coding (576/891 nt) | malG | maltose transporter subunit |
| ? | NC_000913 | 4243008 = | 2 (0.030) | coding (509/891 nt) | malG | maltose transporter subunit | |||||
GGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA > NC_000913/4242911‑4243107 | gataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATc > 1:1157916‑M2/98‑100 (MQ=255)gataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATc > 1:967099‑M2/98‑100 (MQ=255) ataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcc < 2:1352714‑M2/4‑1 (MQ=255) aaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATccca < 2:335436‑M2/6‑1 (MQ=255) acgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccac < 1:1833492‑M2/7‑1 (MQ=255) gacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccaccca < 2:162555‑M2/10‑1 (MQ=255) ggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATa > 1:1487726‑M2/87‑100 (MQ=255) gatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAc > 2:313379‑M2/86‑100 (MQ=255) tgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAcgc > 2:172553‑M2/84‑100 (MQ=255) aataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGa > 2:586585‑M2/82‑100 (MQ=255) accaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaaaa < 2:170943‑M2/22‑1 (MQ=255) accaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaaaa > 2:1590185‑M2/79‑100 (MQ=255) caccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAAtt < 1:1010426‑M2/24‑1 (MQ=255) ccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAc > 1:1903048‑M2/75‑100 (MQ=255) ccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgcc > 2:1668189‑M2/72‑100 (MQ=255) ggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAg < 2:131533‑M2/37‑1 (MQ=255) tactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTa < 1:1520692‑M2/39‑1 (MQ=255) actgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTAt < 2:846947‑M2/40‑1 (MQ=255) ctgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCgtgcg > 1:890079‑M2/60‑94 (MQ=255) tgacagcggcaacaggacaaggcggaaggcctgccacggcgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTc < 2:140299‑M2/42‑1 (MQ=255) acagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAg > 2:502411‑M2/57‑100 (MQ=255) cagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAgg > 2:206572‑M2/56‑100 (MQ=255) gcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGcc < 2:1775192‑M2/47‑1 (MQ=255) caacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatg > 2:1012251‑M2/50‑100 (MQ=255) caacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatg > 2:1541137‑M2/50‑100 (MQ=255) acaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaa > 2:1548676‑M2/48‑100 (MQ=255) caggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaat > 1:1460525‑M2/47‑100 (MQ=255) caggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaa > 1:1078923‑M2/47‑99 (MQ=255) tCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTACTCAGGCCcatgaatg > 1:1655744/1‑100 (MQ=255) aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg < 1:362741‑M2/55‑1 (MQ=255) aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg < 1:1763602‑M2/55‑1 (MQ=255) ggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg < 2:1276620‑M2/55‑1 (MQ=255) acaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaa < 2:1903061‑M2/58‑1 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat < 2:1305457‑M2/59‑1 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat > 2:1062899‑M2/42‑100 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat > 2:252214‑M2/42‑100 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat > 2:453887‑M2/42‑100 (MQ=255) caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat > 2:875381‑M2/42‑100 (MQ=255) gTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGt < 2:1178842/100‑1 (MQ=255) aggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGt > 1:999604‑M2/40‑100 (MQ=255) gcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTAc < 2:1227519‑M2/63‑1 (MQ=255) cggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACt > 2:704654‑M2/37‑100 (MQ=255) cggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACt < 2:1024719‑M2/64‑1 (MQ=255) cggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACt < 1:586583‑M2/64‑1 (MQ=255) cggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACt > 1:583047‑M2/37‑100 (MQ=255) cctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAg > 2:1590737‑M2/30‑100 (MQ=255) cctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAg > 2:1591730‑M2/30‑100 (MQ=255) gccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACg < 1:1631474‑M2/74‑1 (MQ=255) cacggtgtcgcaccatccagcgcaATCCCACCCAGATTCGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACg < 1:29041‑M2/74‑1 (MQ=255) cacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGAt < 1:1692813‑M2/76‑1 (MQ=255) cacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGAt < 1:172552‑M2/76‑1 (MQ=255) tgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaac > 2:1440996‑M2/20‑100 (MQ=255) tgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaac < 1:1012250‑M2/81‑1 (MQ=255) gcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACg < 2:1401348‑M2/85‑1 (MQ=255) caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGc < 1:876019‑M2/86‑1 (MQ=255) caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGc < 1:1673106‑M2/86‑1 (MQ=255) accatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCa < 1:252728‑M2/87‑1 (MQ=255) atccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAc < 2:585421‑M2/90‑1 (MQ=255) agcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAcg < 2:521074‑M2/94‑1 (MQ=255) gcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAcgc < 2:577119‑M2/95‑1 (MQ=255) cgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAcgcg > 1:1909685‑M2/5‑100 (MQ=255) cgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAcgcg > 2:1052789‑M2/5‑100 (MQ=255) cgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAcgcg > 2:1209488‑M2/5‑100 (MQ=255) gcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGa < 2:749588‑M2/97‑1 (MQ=255) aTCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCa > 2:1189269/1‑100 (MQ=255) | GGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA > NC_000913/4242911‑4243107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |