| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 190,553 | Δ14 bp | coding (680‑693/726 nt) | rpsB → | 30S ribosomal subunit protein S2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 190552 | 11 (0.140) | 57 (0.720) | 47/196 | 0.9 | 84.5% | coding (679/726 nt) | rpsB | 30S ribosomal subunit protein S2 |
| ? | NC_000913 | 190567 = | 10 (0.130) | coding (694/726 nt) | rpsB | 30S ribosomal subunit protein S2 | |||||
ATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGG > NC_000913/190471‑190666 | gtgttgacttcgttatcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAgg < 2:924498‑M2/4‑1 (MQ=255) tgacttcgttatcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGga > 2:720512‑M2/93‑100 (MQ=255) tgacttcgttatcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGga < 2:1807074‑M2/8‑1 (MQ=255) acttcgttatcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGgaag < 1:669880‑M2/10‑1 (MQ=255) cttcgttatcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGgaaga > 2:913587‑M2/90‑100 (MQ=255) atcccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTc < 2:1081467‑M2/18‑1 (MQ=255) cccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGt > 1:867973‑M2/81‑100 (MQ=255) ccgggttactacgacgcaatccgggctgggacccagtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCgtn < 1:1727715‑M2/21‑2 (MQ=255) ccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTa < 1:1051577‑M2/21‑1 (MQ=255) ccgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTa < 2:554628‑M2/21‑1 (MQ=255) gCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTctacg < 2:1146925/100‑5 (MQ=255) cgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAg < 2:1486472‑M2/22‑1 (MQ=255) cgggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAg > 1:102847‑M2/79‑100 (MQ=255) ggtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGaa > 2:1664966‑M2/77‑100 (MQ=255) gtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAg < 2:321596‑M2/25‑1 (MQ=255) gtaacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAg < 2:1620831‑M2/25‑1 (MQ=255) taacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGc < 1:1271233‑M2/26‑1 (MQ=255) taacgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGAGGAAGAAAGCTTCGTAGAAGc > 1:254933‑M2/75‑100 (MQ=255) acgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTg < 2:977226‑M2/28‑1 (MQ=255) cgacgacgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgaacgtgaaggccgttctcCAGGCGGAAGAAAGCTACGTAGAAGCTGa > 2:1935368‑M2/72‑100 (MQ=255) cgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggtcgttctcCAGTCGGAAGAAAGCTTCGTACAAGCTGagtaaca < 2:1313358‑M2/35‑3 (MQ=255) cgcaatccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGtaata > 1:675290‑M2/66‑100 (MQ=255) atccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGc < 1:562143‑M2/39‑1 (MQ=255) ccgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCtt > 1:1391444‑M2/60‑100 (MQ=255) cgtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTg > 1:473975‑M2/59‑100 (MQ=255) tACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGa < 2:1809625/100‑1 (MQ=255) gtgctgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGa < 2:1902986‑M2/43‑1 (MQ=255) tgtgaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAAc < 1:1943838‑M2/47‑1 (MQ=255) tGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTTGTAGAAGCTGAGTAATAAGGCTTGATAAc < 1:920988/100‑1 (MQ=255) gggCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACt > 2:301893/1‑100 (MQ=255) gggCGCTGTTGCTGCAACCGGACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACt > 2:1826722/1‑100 (MQ=255) gaccctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTcc < 2:1222921‑M2/50‑1 (MQ=255) accctgtgcctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTccc < 2:1376055‑M2/51‑1 (MQ=255) accctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTccc > 2:679715‑M2/50‑100 (MQ=255) cctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTccccc > 1:1078641‑M2/48‑100 (MQ=255) ctgtacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCa < 1:1787870‑M2/54‑1 (MQ=255) tacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCaaaa > 1:39372‑M2/44‑100 (MQ=255) tacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCaaaa < 2:1236103‑M2/57‑1 (MQ=255) tacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCaaaa > 1:738437‑M2/44‑100 (MQ=255) tacctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCaaaa < 1:720511‑M2/57‑1 (MQ=255) acctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAAt > 2:1747703‑M2/43‑100 (MQ=255) cctgggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATa > 2:7042‑M2/42‑100 (MQ=255) ggcgctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTc < 1:164439‑M2/63‑1 (MQ=255) gctgttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAg > 1:773125‑M2/35‑100 (MQ=255) gTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGt > 2:1737686/1‑100 (MQ=255) ttgctgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGc < 1:952326‑M2/70‑1 (MQ=255) gAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGa > 2:1031344/1‑100 (MQ=255) gAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGa > 2:176856/1‑100 (MQ=255) tgcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGaa > 2:304179‑M2/27‑100 (MQ=255) gcaaccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGaaa > 1:1456774‑M2/26‑100 (MQ=255) ccgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAggcg > 1:1898751‑M2/22‑100 (MQ=255) ccgtacgtgaaggccgttctcCAGGAGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAggcg < 2:254935‑M2/79‑1 (MQ=255) gTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAggcgg > 2:1101525/1‑100 (MQ=255) cgtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAAAAAggcgg < 2:1391452‑M2/80‑1 (MQ=255) gtacgtgaaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAggcggc < 2:191985‑M2/81‑1 (MQ=255) cAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGc < 2:1197554/100‑1 (MQ=255) aaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAACATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCg < 2:1842817‑M2/88‑1 (MQ=255) aaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCg > 1:624549‑M2/13‑100 (MQ=255) aaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCg < 1:1520130‑M2/88‑1 (MQ=255) aaggccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCg < 2:84938‑M2/88‑1 (MQ=255) gccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCgaga < 1:1935616‑M2/91‑1 (MQ=255) gccgttctcCAGGCGGAAGAAAGCGTCTTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCgaga < 1:1935355‑M2/91‑1 (MQ=255) ccgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGaa < 2:1727590‑M2/92‑1 (MQ=255) cgttctcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAAt > 2:1130623‑M2/8‑100 (MQ=255) tcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCg > 2:249933‑M2/3‑100 (MQ=255) tcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCg > 2:1421664‑M2/3‑100 (MQ=255) tcCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCg < 1:716790‑M2/98‑1 (MQ=255) cCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCgg > 2:418749‑M2/2‑100 (MQ=255) cCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCgg < 1:573717‑M2/99‑1 (MQ=255) cAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCggg > 2:600956/1‑100 (MQ=255) | ATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGGG > NC_000913/190471‑190666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |