| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2042125 | 66 (0.720) | 12 (0.150) | 7/158 | NT | 16.8% | intergenic (+100/‑243) | zinT/yodB | zinc and cadmium binding protein, periplasmic/cytochrome b561 homolog |
| ? | NC_000913 | = 2042138 | 60 (0.740) | intergenic (+113/‑230) | zinT/yodB | zinc and cadmium binding protein, periplasmic/cytochrome b561 homolog | |||||
CTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2042018‑2042125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacagacacgTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCG < NC_000913/2042138‑2042041 CTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGATAGCTA > 2:766119/1‑100 TCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTAC < 2:911970/100‑1 ATTGAGTATTCTCATGATAACTCCTCGATACCGCTTTAGTAAGTTATCATAACTGCCACTAGTCGATCCACAAACATCACTTAACGCAAGCTAGCT > 2:1835199/1‑96 TTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGA < 2:5999/100‑1 TTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGA < 2:5994/100‑1 TGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGAC < 1:2065897/100‑1 TGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGAC < 1:2344627/100‑1 GTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG > 1:2379935/1‑100 CCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTG < 1:2431481/100‑1 CGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCT < 1:151515/100‑1 CGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGATACAGACACGTCATAGTGATGAGCGTGTCT < 1:2007401/100‑1 GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTG < 1:1231434/100‑1 GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTG < 2:171758/100‑1 GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTG < 1:906697/100‑1 GATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTG < 1:284137/100‑1 ATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTGT < 1:2436610/100‑1 GCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTGTAG < 1:663585/100‑1 GCCCCTTTACTAACTTATCCTAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTGT < 2:2268564/98‑1 CCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTGTAGC < 1:95996/100‑1 CTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTT < 1:2395645/100‑1 TACAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCA > 2:564140/1‑100 TACAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACGTACTAAAGCGGCA > 2:2062736/1‑100 CAGACACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATC > 1:576579/1‑100 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGG < 2:1009655/100‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGG < 2:2472740/100‑1 CACGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGG < 1:280365/100‑1 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCG > 2:1590313/1‑100 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCG < 1:371177/100‑1 CGTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCG < 1:1018910/100‑1 CTCATTGAGTATTCTCATGATAACGCCTCGATGCCGCTTTAGTAAGTTATCATAACTGCCACTGGTCCATCCACAAACGCCACTGAACGCAAGCTAGCTACAGACACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2042018‑2042125‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacagacacgTCATAGTGATGAGCGTGTCTGTAGCTAGCTTGCGTTCAGTGGCGTTTGTGGATGGACCAGTGGCAGTTATGATAACTTACTAAAGCGGCATCGAGGCG < NC_000913/2042138‑2042041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |