New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3241202	81 (0.890)	16 (0.190)	11/162	NT	17.1%	coding (543/552 nt)	ygjV	Imp‑YgjV family inner membrane protein
	?	NC_000913	= 3241215	81 (0.980)					coding (530/552 nt)	ygjV	Imp‑YgjV family inner membrane protein

GCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3241101‑3241202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCAC  <  NC_000913/3241215‑3241120                                                                                                                                                                                                        GCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCC                                                                                                    <  2:696610/100‑1  CTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCT                                                                                                   >  2:1099236/1‑100   TGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT                                                                                                  <  1:1447610/100‑1                    GTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGG                                                                                 <  1:1521691/100‑1                     TGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGG                                                                                <  1:2289134/100‑1                      GCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                               <  2:520728/100‑1                      GCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGG                                                                               <  2:1607526/100‑1                       CTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGT                                                                              <  1:2324991/100‑1                         GTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTA                                                                            <  1:1531126/100‑1                            CACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAAC                                                                         <  1:562119/100‑1                            CACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAAC                                                                         <  1:728697/100‑1                            CACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAAC                                                                         >  2:1202540/1‑100                            CACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAAC                                                                         <  2:1575197/100‑1                               TGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAACAAT                                                                      <  1:1202548/100‑1                                GCGGCCGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAACAAT                                                                      <  2:2090491/99‑1                                   GCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAAT                                                                  <  2:2283470/100‑1                                          GCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAG                                                           <  2:1277576/100‑1                                                CAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTAAACAATTAATTACGCAGGGCGCT                                                     >  1:1447820/1‑100                                                                                        ATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCA             >  2:1957604/1‑100                                                                                                ACCCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAG     <  1:176431/100‑1                                                                                                 CCCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGC    <  2:1663513/100‑1                                                                                                 CCCCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAAAAGC    >  2:97706/1‑100                                                                                                   CCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCcc  <  1:1730227/100‑3                                                                                                   CCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCAC  <  2:312895/100‑1                                                                                                   CCTTCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCAC  <  1:1730246/100‑1                                                                                                                                                                                                        GCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3241101‑3241202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttCCGCCGTAGACGAAAGGGGTTAAACAATTAATTACGCAGGGCGCTATTTGCCAGACGATCGTCTTCTGCCTGGCAAGCTGCCGCAGTGAACAGCAC  <  NC_000913/3241215‑3241120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.