| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 85 (0.930) | 6 (0.070) | 5/168 | NT | 6.5% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 92 (1.070) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 127 total aligned reads displayed.
CCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATA > NC_000913/4636789‑4636984 | ccGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATg < 1:484265/100‑1 (MQ=255)ccGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATg > 1:411887/1‑100 (MQ=255)ccGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATg < 2:1500973/100‑1 (MQ=255) cGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGACTTGCTCTCTGGGGACCCAACGCATgg < 1:1559943/100‑1 (MQ=255) gggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATggg < 1:716973/100‑1 (MQ=255) gggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATggg < 1:1403137/100‑1 (MQ=255) gAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGgc > 1:1952318/1‑100 (MQ=255) gAAGAGCAACGGAGGGGACGTTGATCGACACAGCAACGTTGGTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGTTCCCAACGCATGGGCAACAGgc < 2:2444222/100‑1 (MQ=255) aaGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGgcg < 1:524210/100‑1 (MQ=255) gagCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCACGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCa > 2:932100/1‑100 (MQ=255) agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAg < 2:172346/100‑1 (MQ=255) gCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGg < 1:1204909‑M2/100‑2 (MQ=255) aaCGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcg < 1:1904187‑M1/100‑21 (MQ=255) cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcgtt > 1:854325‑M2/1‑95 (MQ=255) ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGttt < 2:1139503/100‑1 (MQ=255) ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACCGGCGCAGgcgtt > 1:1681685‑M2/1‑94 (MQ=255) ggAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACACctgcgccagttgcccatgcgttg < 2:1095643‑M1/100‑24 (MQ=255) gAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTa > 1:239748/1‑100 (MQ=255) gAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGATGGCGCGTCCCGGTGTGCTCTCTGGGGACACAACGCATGGGCAACTGGCGCAGGCGTTTa < 2:853071/100‑1 (MQ=255) ggggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgttgggt < 1:1257107‑M1/100‑27 (MQ=255) ggggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGgcagatcgg < 2:41086‑M2/100‑10 (MQ=255) gggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCTTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATc < 2:1635171/100‑1 (MQ=255) gggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATc > 1:276329/1‑100 (MQ=255) ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa < 1:2320670/100‑1 (MQ=255) ggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCa > 2:315424/1‑100 (MQ=255) gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCctgcgccagttgcccatgcgttgggtccc < 1:396176‑M1/100‑30 (MQ=255) aCGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGc < 1:2275036/100‑1 (MQ=255) cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt > 1:2067388/1‑100 (MQ=255) cGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCt > 1:882486/1‑100 (MQ=255) gTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTa > 2:1457418/1‑100 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTaca > 1:1668157/1‑100 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTaca < 1:509464/100‑1 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTaca < 2:743182/100‑1 (MQ=255) gATCGACGCCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaa < 1:2020666/100‑1 (MQ=255) gATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaa > 2:1690774/1‑100 (MQ=255) aTCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaac > 2:533080/1‑100 (MQ=255) tCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTacaaca > 2:1891363/1‑100 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt > 2:375585/1‑100 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt > 1:72779/1‑100 (MQ=255) cGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACAt > 1:242361/1‑100 (MQ=255) gACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATc > 1:108859/1‑100 (MQ=255) acacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCg > 1:1553365/1‑100 (MQ=255) cacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGc > 1:1703134/1‑100 (MQ=255) acCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGc < 2:2384081/99‑1 (MQ=255) ccGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGccc > 1:780189/1‑100 (MQ=255) ccGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGccc > 1:791419/1‑100 (MQ=255) ccGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGccc < 1:924172/100‑1 (MQ=255) gCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGCGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGt > 2:1589172/1‑100 (MQ=255) aaCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGttt < 2:108857/100‑1 (MQ=255) aCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTc < 1:1302627/100‑1 (MQ=255) ttGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGGAGGCGTTTAATCAGCTACAACATCGCCCGTTTcgcg < 2:513880/100‑1 (MQ=255) tGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCgcgc < 2:882478/100‑1 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc > 2:2261679/1‑100 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc < 1:1702316/100‑1 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc < 2:691682/100‑1 (MQ=255) gCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGcc < 2:806140/100‑1 (MQ=255) ggCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAat > 1:1026822/1‑100 (MQ=255) cGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAatat > 1:1503154/1‑100 (MQ=255) cTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTg < 2:582693/100‑1 (MQ=255) tGGCGCGGCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCCCCAATATCGGTgg < 2:1584883/100‑1 (MQ=255) ggCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGc > 2:260624/1‑100 (MQ=255) gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTaa < 1:2160695/100‑1 (MQ=255) tCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAAc > 2:95824/1‑100 (MQ=255) ccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaa > 2:2368939/1‑100 (MQ=255) cGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaaa > 1:1579071/1‑100 (MQ=255) cGATTTGCTCTCTGGCGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACaaa < 2:1961872/100‑1 (MQ=255) gATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAg < 1:2206031/100‑1 (MQ=255) tGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg < 2:2384709/100‑1 (MQ=255) gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcgc < 1:783347/100‑1 (MQ=255) gCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcgc < 2:1183297/100‑1 (MQ=255) ctctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCa > 1:2381877/1‑100 (MQ=255) tctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa > 1:1381423/1‑100 (MQ=255) ctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAAt > 1:43087/1‑100 (MQ=255) ctctGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAAt < 1:95825/100‑1 (MQ=255) ctGCGGACCCAACGCATGGTCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATg < 1:1105436/99‑1 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAat > 2:1065498/1‑100 (MQ=255) gggACCCAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtc < 1:396176‑M2/100‑72 (MQ=255) gggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAata < 1:932108/100‑1 (MQ=255) ggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAatat > 1:964195/1‑100 (MQ=255) ggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTGTCGCGCCAATATCGGTGGCATTAAGAAAGTACGCAACGAatc > 2:1642204/1‑98 (MQ=255) gACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATc < 2:1863749/100‑1 (MQ=255) ccgatctgcctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccc < 2:41086‑M1/93‑92 (MQ=255) aCCCAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccc < 1:1257107‑M2/100‑75 (MQ=255) cccAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccct < 1:775054‑M2/100‑76 (MQ=255) ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATg > 2:2406074/1‑100 (MQ=255) cAACGCATGGGCAACTGGCGCAGgtgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctcc < 2:1095643‑M2/100‑78 (MQ=255) cAACGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctcc < 1:2014595‑M2/100‑78 (MQ=255) cAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGt > 1:887535/1‑100 (MQ=255) agcGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTTCAACATCGGCCGTTGCGGGCCAATGGCGGTGGCATTAACAAAGTGCGCAATGAATATCATg < 2:2192194/96‑1 (MQ=255) aaCGCctgcgccggttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctcc > 1:1681685‑M1/1‑5 (MQ=255) cGCATGGGCAACTGGCGCAGgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgtt < 1:1904187‑M2/100‑81 (MQ=255) cGCATGGGCAACTGGCGCAGGCGTTTAATCGGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta < 2:147775/100‑1 (MQ=255) cGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta > 1:2209587/1‑100 (MQ=255) cGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta > 2:1164735/1‑100 (MQ=255) ncctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgttg > 2:968331‑M1/2‑2 (MQ=255) gCctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtccccagatcgg > 1:41087‑M1/1‑2 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCtat < 1:1026126/100‑1 (MQ=255) gCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCta < 2:147756/99‑1 (MQ=255) cctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgttgc > 2:34461‑M1/1‑1 (MQ=255) cctgcgccagttgcccatgcgttgggtccccagagagcaaatcgggacgcgccagctccgccagcaacgttgcggtgtcgatcaacgtcccctccgttgc < 1:1204909‑M1/100‑100 (MQ=255) | CCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATA > NC_000913/4636789‑4636984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |