New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)10 (0.120) 6/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 132 total aligned reads displayed.

GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433
                                                                                                   |                                                                                                   
tgaaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagg                                                                                                     >  1:1913615‑M1/100‑100 (MQ=255)
ggCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttg                                                                                                     >  2:1560176/1‑100 (MQ=255)
 ncGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgc                                                                                                    >  1:1876973/2‑100 (MQ=255)
 gaaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGc                                                                                                    <  2:1698823‑M1/2‑1 (MQ=255)
 gCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTATCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgc                                                                                                    <  1:696197/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  2:1961772/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   >  1:464109/1‑100 (MQ=255)
  aaggcttcggcgactttacggtgcgtgcggacatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGcc                                                                                                   >  1:419021‑M1/98‑100 (MQ=255)
    ttAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTg                                                                                                 >  1:471269/1‑100 (MQ=255)
       gTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                              >  2:791437/1‑100 (MQ=255)
        tttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAt                                                                                               <  2:2293940/98‑1 (MQ=255)
          tCCGCCAGCGCCAGAATGCGATCTCCCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGa                                                                                           >  2:531767/1‑100 (MQ=255)
           ccGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGAc                                                                                          <  2:1929751/100‑1 (MQ=255)
            cgccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACg                                                                                         >  2:1502753/1‑100 (MQ=255)
             gccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGc                                                                                        <  1:32432/100‑1 (MQ=255)
               cagcgccagAATGCTATCTACCTTCGGCATTTTGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTc                                                                                      <  2:1191626/100‑1 (MQ=255)
                 gcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAc                                                                                    <  1:1994498/100‑1 (MQ=255)
                    ccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGAGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgcg                                                                                 >  1:626381/1‑100 (MQ=255)
                      agAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGtt                                                                               <  1:1190804/100‑1 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                              >  2:435953/1‑100 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                              <  1:352761/100‑1 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                              <  2:169410/100‑1 (MQ=255)
                        aaTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCt                                                                             <  2:721604/100‑1 (MQ=255)
                         aTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCtt                                                                            >  1:745448/1‑100 (MQ=255)
                         aTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCtt                                                                            <  2:457983/100‑1 (MQ=255)
                          gtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTa                                                                           <  2:94505‑M1/27‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTATATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  2:469019/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  1:1292733/100‑1 (MQ=255)
                              aTCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAg                                                                       <  1:74341/100‑1 (MQ=255)
                              aTCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAg                                                                       <  2:320266/100‑1 (MQ=255)
                               tCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAgg                                                                      <  2:1270327/100‑1 (MQ=255)
                                gcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     >  1:143418‑M1/68‑100 (MQ=255)
                                gcatcaggcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     >  2:1699886‑M1/68‑100 (MQ=255)
                                cTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     <  1:127690/100‑1 (MQ=255)
                                cTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGc                                                                     <  1:1560187/100‑1 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    <  2:1806742/100‑1 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    <  1:559618/100‑1 (MQ=255)
                                 catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatccgcctggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    >  2:2003290‑M1/67‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  1:1018135‑M1/66‑100 (MQ=255)
                                  aCCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   <  1:1959341/100‑1 (MQ=255)
                                  aCCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  1:1310682/1‑100 (MQ=255)
                                  aCCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  1:2528303/1‑100 (MQ=255)
                                   tcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCCCGCGTTCTTATCAGGCCt                                                                   >  2:1103735‑M1/65‑99 (MQ=255)
                                   ccTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  1:2122846/1‑99 (MQ=255)
                                    ccttcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                 >  1:1704770‑M1/64‑100 (MQ=255)
                                    cTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                 >  1:1639961/1‑100 (MQ=255)
                                    cTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                 <  1:78449/100‑1 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                <  2:718344/100‑1 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                >  1:78330/1‑100 (MQ=255)
                                     attcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                >  1:2442534‑M1/63‑100 (MQ=255)
                                     attcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                >  1:94506‑M1/63‑100 (MQ=255)
                                       cGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAg                                                              <  1:483615/100‑1 (MQ=255)
                                           aGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCg                                                          <  2:766244/100‑1 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACCTAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCg                                                          >  2:1836169/1‑99 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                         >  1:806591/1‑100 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                         <  2:1624471/100‑1 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                         >  2:717399/1‑100 (MQ=255)
                                               cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                      >  2:2305418/1‑100 (MQ=255)
                                                gttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGGTg                                                     >  2:455057/1‑100 (MQ=255)
                                                   cAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATg                                                  <  1:2009395/100‑1 (MQ=255)
                                                     gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATgg                                                 <  2:416351/99‑1 (MQ=255)
                                                     gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                >  2:1964800/1‑100 (MQ=255)
                                                      tccgatctgATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  2:138758/92‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               >  1:1207226/1‑100 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               >  1:173190/1‑100 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  1:593961/100‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                <  2:990700/99‑1 (MQ=255)
                                                       gCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTa                                              <  1:436614/100‑1 (MQ=255)
                                                       gCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTa                                              >  1:257225/1‑100 (MQ=255)
                                                         tgatAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAAt                                            <  1:634127/97‑1 (MQ=255)
                                                          tttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCCGGCCTACAAGACCGGGCTGATGGTTaa                                             >  2:2484779/1‑98 (MQ=255)
                                                          tttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATc                                           >  1:1071684/1‑100 (MQ=255)
                                                           ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                          <  2:911555/100‑1 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTagatcgga                                       >  1:138760/1‑93 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                       <  1:1005511/100‑1 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      >  1:1926476/1‑100 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      <  1:1102374/100‑1 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAGGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      <  2:346071/100‑1 (MQ=255)
                                                                 cGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGAAGCTCACGCGTTCTTATCAGGCCTACAAGAACGGGCTGATGGTTAATCCCACaa                                     >  2:387328/1‑99 (MQ=255)
                                                                     tttGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAc                                <  1:1980671/100‑1 (MQ=255)
                                                                      ttGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACACTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                               >  2:1401174/1‑100 (MQ=255)
                                                                         gACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACgcgc                            >  1:2346027/1‑100 (MQ=255)
                                                                          aCATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                           <  2:1186590/100‑1 (MQ=255)
                                                                             tAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGa                        >  2:437521/1‑100 (MQ=255)
                                                                              aGATTCCTCACTGTTTGCCTTGCCCGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGAt                       >  1:1221317/1‑100 (MQ=255)
                                                                                aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCg                     >  1:368521/1‑100 (MQ=255)
                                                                                aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCg                     <  1:952407/100‑1 (MQ=255)
                                                                                  tCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAg                   >  1:1398387/1‑100 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  >  1:2424829/1‑100 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  >  1:917499/1‑100 (MQ=255)
                                                                                     tCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAc                >  1:1770910/1‑100 (MQ=255)
                                                                                      cACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAcc               <  1:1744571/100‑1 (MQ=255)
                                                                                           tttGCCTTGCCTGATGCGACGCTCACTCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCg          <  1:264080/100‑1 (MQ=255)
                                                                                            ttgccttgccTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGa         >  1:1600207/1‑100 (MQ=255)
                                                                                             tgccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGaa        <  1:2153266/100‑1 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAat       <  2:742297/99‑1 (MQ=255)
                                                                                                cttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatga     >  1:829692/1‑100 (MQ=255)
                                                                                                  tgcctGATGCGACGCTTACGCGTTCTTATCAGGCTGACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCACCGGATCGAGCACCGGGCGAatgatg   <  2:626374/100‑1 (MQ=38)
                                                                                                   GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc  >  2:464105‑M1/1‑100 (MQ=255)
                                                                                                   GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc  <  2:2507877‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.