New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4526710 =83 (0.910)4 (0.050) 4/162 NT 5.2% coding (179/783 nt) sgcR putative DNA‑binding transcriptional regulator
?NC_000913 4526743 = 69 (0.830)coding (146/783 nt) sgcR putative DNA‑binding transcriptional regulator
Rejected: Frequency below cutoff threshold.

Only 100 of 101 total aligned reads displayed.

GCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACA  >  NC_000913/4526644‑4526842
                                                                                                   |                                                                                                   
gCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGAt                                                                                                     <  1:2511970/100‑1 (MQ=255)
catggagctttgtggctatgcggaagcgactgtccgtcgtgatttccagtatattgtcaaccagtaTCCAGGCAACCGTGACCGCGGATCATGCCTGGAt                                                                                                     >  1:1188554‑M1/67‑100 (MQ=255)
 atggagctttttggctatgcggaagcgactgtccgtcgtgatttccagtatattgtcaaccagtaTCCAGGCAACCGTGACCGCGGATCATGCCTGGATa                                                                                                    >  1:21642‑M1/66‑100 (MQ=255)
  cacaGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATAc                                                                                                   >  2:721132/1‑100 (MQ=255)
     aGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTgg                                                                                                <  1:585742/100‑1 (MQ=255)
      gctttttggctatgcggaagcgactgtccgtcgtgatttccagtatattgtcaaccagtaTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGt                                                                                               >  1:602876‑M1/61‑100 (MQ=255)
       aTTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGtt                                                                                              <  2:2247877/100‑1 (MQ=255)
        tttttggctatgcggaagcgactgtccgtcgtgatttccagtatattgtcaaccagtaTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTg                                                                                             >  1:702158‑M1/59‑100 (MQ=255)
        ttGCATTGTACGTTTCACGTCGAAGACTTACTGTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTg                                                                                             <  2:578001/100‑1 (MQ=255)
          gCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGAc                                                                                           <  1:819997/100‑1 (MQ=255)
          gCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGAc                                                                                           >  1:1440530/1‑100 (MQ=255)
          gCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGAc                                                                                           <  1:1384173/100‑1 (MQ=255)
           cAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACa                                                                                          >  2:530488/1‑100 (MQ=255)
           cAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACa                                                                                          <  1:1025119/100‑1 (MQ=255)
             aTGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAat                                                                                        >  2:365937/1‑100 (MQ=255)
             aTGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAat                                                                                        >  2:2148717/1‑100 (MQ=255)
             aTGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAat                                                                                        <  2:302915/100‑1 (MQ=255)
              tGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAata                                                                                       >  1:2183430/1‑100 (MQ=255)
              tGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAata                                                                                       <  1:113838/100‑1 (MQ=255)
                tACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAAtata                                                                                     >  1:201214/1‑100 (MQ=255)
                 aCGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATAc                                                                                    <  1:1221190/100‑1 (MQ=255)
                  cGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGCCACTATACt                                                                                   >  2:1142990/1‑100 (MQ=255)
                  cGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACt                                                                                   >  2:1387110/1‑100 (MQ=255)
                  cGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACt                                                                                   >  1:830938/1‑100 (MQ=255)
                    tttCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTgg                                                                                 <  1:2208698/100‑1 (MQ=255)
                    tttCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTgg                                                                                 <  1:24312/100‑1 (MQ=255)
                    tttCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTgg                                                                                 <  1:901829/100‑1 (MQ=255)
                      tCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGaa                                                                               >  2:1660437/1‑100 (MQ=255)
                      tCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGaa                                                                               <  1:119965/100‑1 (MQ=255)
                      tCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGaa                                                                               <  2:2148602/100‑1 (MQ=255)
                       cACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGaaa                                                                              >  1:1925467/1‑100 (MQ=255)
                        aCGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAAt                                                                             >  1:2238323/1‑100 (MQ=255)
                         cGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATc                                                                            <  1:1095509/100‑1 (MQ=255)
                         cGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATc                                                                            >  2:1378994/1‑100 (MQ=255)
                           tCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCac                                                                          >  2:2075743/1‑100 (MQ=255)
                           tCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCac                                                                          <  1:2131814/100‑1 (MQ=255)
                             gAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAAGCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCacga                                                                        >  2:1417733/1‑100 (MQ=255)
                              aaGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCacgac                                                                       <  1:665941/100‑1 (MQ=255)
                                  cGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGAc                                                                   <  1:92573/100‑1 (MQ=255)
                                      ctctTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTc                                                               >  2:1468312/1‑100 (MQ=255)
                                        ctTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGc                                                             >  2:2121708/1‑100 (MQ=255)
                                        ctTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGc                                                             >  1:692716/1‑100 (MQ=255)
                                        ctTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGc                                                             >  1:278178/1‑100 (MQ=255)
                                         tttGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCt                                                            <  1:898568/100‑1 (MQ=255)
                                              cgtcTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAGATCACGACGGACAGTCGCTTCCGc                                                       <  1:2401764/100‑1 (MQ=255)
                                               gtcTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCa                                                      <  1:1832063/100‑1 (MQ=255)
                                                  tGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAg                                                   >  1:1235787/1‑100 (MQ=255)
                                                   gTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGc                                                  >  2:539247/1‑100 (MQ=255)
                                                   gTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGc                                                  >  2:1828468/1‑100 (MQ=255)
                                                        gtcgtcGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCaaaa                                             <  2:2386433/100‑1 (MQ=255)
                                                         caaccagtatccaggcatgatccgcggtcacggttgcctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCaaaaa                                            >  1:702158‑M2/43‑100 (MQ=255)
                                                          cgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAg                                           >  1:1895241/1‑100 (MQ=255)
                                                          cgtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTCACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCaaaa                                             >  2:2379047/1‑98 (MQ=255)
                                                           gtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGc                                          >  2:24810/1‑100 (MQ=255)
                                                           gtcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGc                                          >  1:1143872/1‑100 (MQ=255)
                                                           accagtatccaggcatgatccgcggtcacggttgcctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGc                                          >  1:602876‑M2/41‑100 (MQ=255)
                                                            gcgAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATGCTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCt                                         >  2:1144941/2‑100 (MQ=255)
                                                               aaGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCa                                      <  1:751540/100‑1 (MQ=255)
                                                               aaGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCa                                      <  1:1363427/100‑1 (MQ=255)
                                                                tatccaggcatgatccgcggtcacggttgcctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCAt                                     >  1:21642‑M2/36‑100 (MQ=255)
                                                                aGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCAt                                     >  1:980840/1‑100 (MQ=255)
                                                                aGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCAt                                     >  1:2420987/1‑100 (MQ=255)
                                                                 gTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATg                                    >  2:584539/1‑100 (MQ=255)
                                                                 gTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATg                                    >  2:1497886/1‑100 (MQ=255)
                                                                 atccaggcatgatccgcggtcacggttgcctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCACAAAGCTCCATg                                    >  1:1188554‑M2/35‑100 (MQ=255)
                                                                   CCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGc                                  <  2:114067‑M1/100‑1 (MQ=255)
                                                                    CAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGcc                                 >  2:2537184‑M1/1‑100 (MQ=255)
                                                                     AGGCAACCGTGTCCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTACGCACAGCCAAAAAGCTCCATgg                                   <  2:737897‑M1/97‑1 (MQ=255)
                                                                     AGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCct                                >  1:405899‑M1/1‑100 (MQ=255)
                                                                      GGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctg                               <  1:824470‑M1/100‑1 (MQ=255)
                                                                      GGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctg                               <  2:1971731‑M1/100‑1 (MQ=255)
                                                                       GCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgc                              >  2:2505681‑M1/1‑100 (MQ=255)
                                                                       GCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgc                              >  2:1547090‑M1/1‑100 (MQ=255)
                                                                        CAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgc                              <  1:1217333‑M1/99‑1 (MQ=255)
                                                                         AACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgctg                            >  1:2332871‑M1/1‑100 (MQ=255)
                                                                         AACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCctgctg                            <  2:2203752‑M1/100‑1 (MQ=255)
                                                                           ccGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCtgtg                          <  1:1696109/100‑1 (MQ=255)
                                                                             gTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCtgtgtg                        <  2:14738/100‑1 (MQ=255)
                                                                             gTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCtgtgtg                        <  1:910903/100‑1 (MQ=255)
                                                                              tGACGGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCAGCATAGACAAAAAGCTCCATGGCCTGCTGTGTgg                       <  2:777036/100‑1 (MQ=255)
                                                                              tGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTgg                       <  2:156759/100‑1 (MQ=255)
                                                                              tGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTgg                       <  2:2325716/100‑1 (MQ=255)
                                                                                 ccGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgaga                    >  1:393634/1‑100 (MQ=255)
                                                                                 ccGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgaga                    >  2:1175421/1‑100 (MQ=255)
                                                                                 ccGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCC‑AAAAGCTCCATGGCCTGCTGTGTGGagag                   >  1:1001527/1‑100 (MQ=255)
                                                                                 ccGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAAGCACGACGGACAGTCGCTTAAAAAAAAAAAAAAAGCTCCATGGCCTGCTGTGTGgag                     <  2:902279/99‑1 (MQ=255)
                                                                                 ccGCGGATCATGCCTGGATACTGGTTGACAATATACTAGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGgaga                    >  2:1370315/1‑100 (MQ=255)
                                                                                   gcgGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAgg                  <  2:271984/100‑1 (MQ=255)
                                                                                    cgGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGt                 >  1:2241691/1‑100 (MQ=255)
                                                                                      gATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGa               >  1:301986/1‑100 (MQ=255)
                                                                                       aTCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGAc              <  1:2302838/100‑1 (MQ=255)
                                                                                        tCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACg             >  1:2307247/1‑100 (MQ=255)
                                                                                         cATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGa            <  1:202197/100‑1 (MQ=255)
                                                                                             cctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATgtn        <  2:1160578‑M2/94‑2 (MQ=255)
                                                                                              ctggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTg       >  1:1977933‑M2/6‑100 (MQ=255)
                                                                                              caggaTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTg       <  1:1322445‑M2/95‑1 (MQ=255)
                                                                                                  aTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCcac   <  1:202449‑M2/99‑1 (MQ=255)
                                                                                                  aTACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCcac   <  1:2092933‑M2/99‑1 (MQ=255)
                                                                                                   tACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCcaca  >  1:724431/1‑100 (MQ=255)
                                                                                                   tACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCcaca  <  1:957238/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCCACAGATTGCAATGTACGTTTCACGTCGAAGACGTACTCTTTGTCGTCTGTACTGTCGTCGAAGTCCAGGCAACCGTGACCGCGGATCATGCCTGGATACTGGTTGACAATATACTGGAAATCACGACGGACAGTCGCTTCCGCATAGCCAAAAAGCTCCATGGCCTGCTGTGTGGAGAGGTGACGATGTTGCCACA  >  NC_000913/4526644‑4526842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.