New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 68343572 (0.790)16 (0.190) 12/162 NT 18.7% intergenic (‑42/+42) hscC/rihA Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor/ribonucleoside hydrolase 1
?NC_000913 = 683457 74 (0.890)intergenic (‑64/+20) hscC/rihA Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor/ribonucleoside hydrolase 1

Only 100 of 110 total aligned reads displayed.

GATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATT  >  NC_000913/683360‑683554
                                                                                                 |                                                                                                 
gaTCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtt                                                                                                 >  2:2320921‑M2/1‑98 (MQ=255)
gaTCGATACCAATGGCGAGATCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtc                                                                                                 >  2:1974445‑M2/1‑98 (MQ=255)
  tCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtctt                                                                                               >  2:352136‑M2/1‑96 (MQ=255)
     acaccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaat                                                                                            <  2:663587‑M2/98‑8 (MQ=255)
     aTACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaat                                                                                            <  1:786020‑M2/100‑8 (MQ=255)
      tACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatc                                                                                           >  2:1116991‑M2/1‑92 (MQ=255)
        ccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGATCACCCAGGTAACGCGTGGTGATCTTAATCaa                                                                                         >  2:1916754/1‑100 (MQ=255)
        ccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCaa                                                                                         >  1:1600333/1‑100 (MQ=255)
        ccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCaa                                                                                         >  1:1417271/1‑100 (MQ=255)
        ccAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCaa                                                                                         >  1:1773157/1‑100 (MQ=255)
         cAATGGCGAGTTCTGCATTATCCATTTCATTTAAAAAAAAAAAAAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCa                                                                                          <  2:1984656/98‑1 (MQ=255)
         cAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAAt                                                                                        >  1:755863/1‑100 (MQ=255)
          aaTGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATg                                                                                       <  2:721639/100‑1 (MQ=255)
            tagCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGAc                                                                                     <  2:1417260/98‑1 (MQ=255)
             ggCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACg                                                                                    >  1:2307511/1‑100 (MQ=255)
              gCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACgt                                                                                   >  1:294903/1‑100 (MQ=255)
               cGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACgtg                                                                                  >  1:1006396/1‑100 (MQ=255)
               cGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAAGTAACGCGTAGTGAtcttaatc                                                                                           <  2:1765380‑M2/91‑9 (MQ=255)
                  gTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACgtgtgt                                                                               <  1:544889/100‑1 (MQ=255)
                  gTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACgtgtgt                                                                               <  1:2361807/100‑1 (MQ=255)
                  gTTCTGCATTATCCATTCCATTTACAGCTTGAGTGAACAAGTAATAAACACACTAATGCCACGCAGGTCACGCGTGGAGATCTAAATAAATGACctgag                                                                                >  2:2423825/1‑97 (MQ=255)
                    tCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGATGTGTGTTa                                                                             <  2:1973081/100‑1 (MQ=255)
                     cTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctcttttt                                                                            <  1:2333136‑M2/100‑24 (MQ=255)
                     cTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTaa                                                                            <  1:229417/100‑1 (MQ=255)
                      tGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGTTAAACAGATTAAGACCACGCAGATAAAGGGTGATGATCTTAATAAATGACCTGGGTAAAg                                                                           >  2:1724091/1‑100 (MQ=255)
                      tGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAg                                                                           >  1:2233605/1‑100 (MQ=255)
                       gCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGc                                                                          <  1:954576/100‑1 (MQ=255)
                       gCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGc                                                                          <  1:954549/100‑1 (MQ=255)
                       gCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGc                                                                          >  2:2422854/1‑100 (MQ=255)
                       gCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCAAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGc                                                                          >  2:358368/1‑100 (MQ=255)
                        cATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCg                                                                         >  1:1416139/1‑100 (MQ=255)
                            aTCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTaaa                                                                     >  1:1007326/1‑100 (MQ=255)
                                aTTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAAttt                                                                 >  1:1486540/1‑100 (MQ=255)
                                aTTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAAttt                                                                 >  1:1961087/1‑100 (MQ=255)
                                  tGCATTTATATCTTGTAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCa                                                               <  1:2517821/100‑1 (MQ=255)
                                   gCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAg                                                              >  1:2528583/1‑100 (MQ=255)
                                     ccgatcttCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGAc                                                            <  2:626261/93‑1 (MQ=255)
                                     aTTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGAc                                                            >  1:853162/1‑100 (MQ=255)
                                      tttATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACg                                                           <  1:679292/100‑1 (MQ=255)
                                           tctttGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAg                                                      <  1:1247645/97‑1 (MQ=255)
                                            tCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGAcagatcgg                                                     >  1:626268/1‑93 (MQ=255)
                                            tCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGc                                                     >  2:1316289/1‑100 (MQ=255)
                                            tCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGc                                                     >  2:1204715/1‑100 (MQ=255)
                                            tCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGc                                                     >  1:1982374/1‑100 (MQ=255)
                                            tCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGc                                                     >  1:1854607/1‑100 (MQ=255)
                                             cTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGcc                                                    >  1:2220087/1‑100 (MQ=255)
                                             cTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGcc                                                    <  1:1639331/100‑1 (MQ=255)
                                             cTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGcc                                                    >  1:1075958/1‑100 (MQ=255)
                                             cTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAAAGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatg                                                      <  2:1080832‑M2/98‑46 (MQ=255)
                                              ttGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAgaga                                                   >  2:1247637/1‑97 (MQ=255)
                                                gaaagaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGt                                                 <  2:399524/100‑1 (MQ=255)
                                                gaaagaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGt                                                 >  2:1023709/1‑100 (MQ=255)
                                                 aaagaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTa                                                <  1:344334/100‑1 (MQ=255)
                                                 aaagaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTa                                                >  1:2344770/1‑100 (MQ=255)
                                                  aagaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTaa                                               >  1:1772918/1‑100 (MQ=255)
                                                    gaaaAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAAt                                             >  1:1589120/1‑100 (MQ=255)
                                                      gagagagATAAACAGAGTAAGACCAGCCAGGTAACGCGGGGTGATCTTAATCAATGACGTGGGTTGAGCGTAAAATTTCAGAGAATCAGCCAGTAAATca                                           >  2:1901510/4‑100 (MQ=255)
                                                      aaaaGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcaga                                           <  1:1609913‑M2/100‑57 (MQ=255)
                                                      aaaaGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcaga                                           <  2:558034‑M2/100‑57 (MQ=255)
                                                         agagATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaact                                        <  2:364093‑M2/100‑60 (MQ=255)
                                                         agagATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaact                                        <  1:2025296‑M2/100‑60 (MQ=255)
                                                          gagaTAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaact                                        <  2:247272‑M2/99‑60 (MQ=255)
                                                            gaTAAACAGATTAAGACCACCCAGGTCACGCGCGGTGAtcttaatctgtttatctctttttctttccagatataaatgcaatggataatgcagaactcgc                                     <  2:955701‑M2/100‑63 (MQ=255)
                                                             aTAAACAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcg                                      <  2:202067‑M2/98‑62 (MQ=255)
                                                               aaaCAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttaaacatataaatgcaatgtataatgcagaactcgccat                                  <  2:1045536‑M2/100‑66 (MQ=255)
                                                                aaCAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcgccatt                                 <  1:2377054‑M2/100‑67 (MQ=255)
                                                                 aCAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcgccattg                                <  2:365002‑M2/100‑68 (MQ=255)
                                                                 aCAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcgccattg                                <  2:785262‑M2/100‑68 (MQ=255)
                                                                 aCAGATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcgccattg                                <  1:550294‑M2/100‑68 (MQ=255)
                                                                   aGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGAc                              <  2:1464941/100‑1 (MQ=255)
                                                                   aGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGAc                              <  1:663594/100‑1 (MQ=255)
                                                                    gATTAAGACCACCCAGGTAACGCGTGGTGAtcttaatctgtttatctctttttctttcaagatataaatgcaatggataatgcagaactcgccattggta                             <  1:2138576‑M2/100‑71 (MQ=255)
                                                                    gATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACg                             >  1:2015871/1‑100 (MQ=255)
                                                                    gATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACg                             >  2:548131/1‑100 (MQ=255)
                                                                      ttAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGAt                           <  1:147156/100‑1 (MQ=255)
                                                                      ttAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTAAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGAt                           >  2:581920/1‑100 (MQ=255)
                                                                        aaGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCa                         <  2:755824/100‑1 (MQ=255)
                                                                        aaGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCa                         <  1:1585543/100‑1 (MQ=255)
                                                                        aaGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCa                         <  1:1571642/100‑1 (MQ=255)
                                                                        aaGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCa                         <  1:1802504/100‑1 (MQ=255)
                                                                         aGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGAGGATCAGCCAGTAAATCAACAAAGCCCTGATGGTCaa                        >  1:197851/1‑100 (MQ=255)
                                                                          gACCACCCAGGTAACGCGTGGAGATCTTAATCAATGACGTGTGTTAAGCGTAAAATGTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAAc                       >  2:1309345/1‑100 (MQ=255)
                                                                           accaccCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACa                      <  1:65455/100‑1 (MQ=255)
                                                                           accaccCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACa                      >  2:1164591/1‑100 (MQ=255)
                                                                           accaccCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACa                      >  2:1282888/1‑100 (MQ=255)
                                                                            ccaccCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACAt                     >  1:1634218/1‑100 (MQ=255)
                                                                             caccCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATc                    <  1:2123138/100‑1 (MQ=255)
                                                                               cccAGGTAACGCGTGGTGATGTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGa                  >  2:1570834/1‑100 (MQ=255)
                                                                               cccAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGa                  <  1:1765119/100‑1 (MQ=255)
                                                                                ccAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGAc                 <  1:1400504/100‑1 (MQ=255)
                                                                                 cAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGAcc                <  2:1471064/100‑1 (MQ=255)
                                                                                    gTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCAtt             >  1:1311461/1‑100 (MQ=255)
                                                                                      atcgagtggtgATTTTAATCAATGACCAATGTGAAACGTAACATCTAATCCGTACAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTAc           <  2:1914631/95‑1 (MQ=255)
                                                                                      aaCGCGTGGTGATCTTAATCAATGACGTGTGGTAAGCTTAAAATTTCCGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTAc           <  2:1729452/100‑1 (MQ=255)
                                                                                        cgcgTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACgg         >  1:1388414/1‑100 (MQ=255)
                                                                                            tggtgATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGc     <  1:1062368/100‑1 (MQ=255)
                                                                                            tggtgATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGc     <  2:727293/100‑1 (MQ=255)
                                                                                             ggtgATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCa    <  1:1628045/100‑1 (MQ=255)
                                                                                               tgATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGAGGCa    >  2:2109764/1‑98 (MQ=255)
                                                                                               tgATCTTAATCAATGACGTGTGTTAAGCGTAAAAGTTCAGACGATCAGCCAGTAAATCAACAAAGGCCTGACAATCAACATCGACCATTACGGTGGCAtt  >  2:1351460/1‑100 (MQ=255)
                                                                                                 |                                                                                                 
GATCGATACCAATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGAGATAAACAGATTAAGACCACCCAGGTAACGCGTGGTGATCTTAATCAATGACGTGTGTTAAGCGTAAAATTTCAGACGATCAGCCAGTAAATCAACAAAGCCCTGACGATCAACATCGACCATTACGGTGGCATT  >  NC_000913/683360‑683554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.