New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 72190NA (NA)8 (0.070) 7/164 NT NA noncoding (55/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 72220 NA (NA)noncoding (85/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 151 total aligned reads displayed.

TTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTC  >  NC_000913/72091‑72289
                                                                                                   |                                                                                                   
tttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAg                                                                                                     <  2:2706389/100‑1 (MQ=255)
  tGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgt                                                                                                   >  1:2038912‑M1/1‑98 (MQ=255)
   gCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtc                                                                                                  <  2:2802612‑M1/100‑4 (MQ=255)
   gCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtc                                                                                                  >  2:2433353‑M1/1‑97 (MQ=255)
    cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcg                                                                                                 >  1:3228195‑M1/1‑96 (MQ=255)
        aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                                             >  1:3088389/1‑100 (MQ=255)
        aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                                             >  2:332683/1‑100 (MQ=255)
        aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                                             <  2:1580158/100‑1 (MQ=255)
            ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGGCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                                         >  2:540777/1‑100 (MQ=255)
            ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                                          <  1:991657/99‑1 (MQ=255)
            ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                                         >  1:1064774/1‑100 (MQ=255)
            ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                                         >  2:3088819/1‑100 (MQ=255)
             gTTGGGGTTTAGGAGATAGTCTTGTGGGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                                        >  2:2057098/1‑100 (MQ=255)
             gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                                        >  1:3074834/1‑100 (MQ=255)
              ttGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGt                                                                                       <  2:842514/100‑1 (MQ=255)
                ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                                                     >  2:2632594/1‑100 (MQ=255)
                ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                                                     <  2:1164783/100‑1 (MQ=255)
                 gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                                                    >  2:2727692/1‑100 (MQ=255)
                      tAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgc                                                                                 >  1:56328/1‑98 (MQ=255)
                        ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCA                                                                             <  2:943414‑M2/100‑1 (MQ=255)
                          agaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatc                                                                           <  1:2477603‑M1/100‑27 (MQ=255)
                          agaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATC                                                                           <  2:1161325‑M2/100‑1 (MQ=255)
                           gaTGGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatc                                                                           <  1:1028428‑M1/99‑27 (MQ=255)
                            aTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccg                                                                         <  2:33248‑M1/100‑29 (MQ=255)
                             tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATGCGGCGTGAACGCCTTATCCG                                                                         >  1:786925‑M2/1‑99 (MQ=255)
                             tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGA                                                                        <  1:902072‑M2/100‑1 (MQ=255)
                              aGTCTTGTGCGGGTTGCCTGATGCTACGCTTGCCGCGTCTTATCAGGCCGACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGAC                                                                       >  2:1445881‑M2/1‑100 (MQ=255)
                              aGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgac                                                                       <  2:1647535‑M1/100‑31 (MQ=255)
                              aGTCTTGTGCGGGTTGCCTGATGCGACGCGTGCCGCGTCTTATCGGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgac                                                                       <  1:1175320‑M1/100‑31 (MQ=255)
                               gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                                      >  2:2502713/1‑100 (MQ=255)
                               gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACACCGCATCCGACa                                                                      >  2:122470/1‑100 (MQ=255)
                                  ttGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacctac                                                                   <  1:157797‑M1/100‑35 (MQ=255)
                                   tgtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTAACAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGc                                                                  >  1:1815028/1‑100 (MQ=255)
                                    gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                                                 >  1:3006769/1‑100 (MQ=255)
                                       cGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATAc                                                              <  1:468643/100‑1 (MQ=255)
                                         ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                                            >  2:2894239/1‑100 (MQ=255)
                                         ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                                            <  2:2158257/100‑1 (MQ=255)
                                            tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTTCATACTAAcc                                                         <  1:2385707/100‑1 (MQ=255)
                                             gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATCCTAAccc                                                        >  1:16786/1‑100 (MQ=255)
                                             gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                                        <  2:3088415/100‑1 (MQ=255)
                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                       >  1:760350/1‑100 (MQ=255)
                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                       >  2:1762770/1‑100 (MQ=255)
                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                       <  2:1750916/100‑1 (MQ=255)
                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                       >  1:1653353/1‑100 (MQ=255)
                                              ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                       >  1:1375/1‑100 (MQ=255)
                                               cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttt                                                      <  1:2395560‑M1/100‑48 (MQ=255)
                                               cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                      <  2:3171772/100‑1 (MQ=255)
                                               cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                      >  2:167992/1‑100 (MQ=255)
                                                tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                      >  2:11451/1‑99 (MQ=255)
                                                      gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTCCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATccc                                                <  2:3350006/99‑1 (MQ=255)
                                                      gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                                               <  1:501274/100‑1 (MQ=255)
                                                       aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                                              <  2:487175/100‑1 (MQ=255)
                                                       aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                                              <  1:3305855/100‑1 (MQ=255)
                                                       aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                                              <  2:2273460/100‑1 (MQ=255)
                                                        cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                                             >  1:1266456/1‑100 (MQ=255)
                                                        cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                                             >  2:1486392/1‑100 (MQ=255)
                                                             gCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtaggcctgataa                                        <  2:1148360‑M1/100‑62 (MQ=255)
                                                               cgcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGcc                                      <  2:2086990/100‑1 (MQ=255)
                                                                gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg                                     >  2:641855/1‑100 (MQ=255)
                                                                gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg                                     <  1:717214/100‑1 (MQ=255)
                                                                  gTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGaa                                   >  2:2375077/1‑100 (MQ=255)
                                                                   tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg                                  <  2:1188741/100‑1 (MQ=255)
                                                                    cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                 >  1:1357060/1‑100 (MQ=255)
                                                                    cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                 <  1:2680035/100‑1 (MQ=255)
                                                                    cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                 <  2:3228223/100‑1 (MQ=255)
                                                                     ttATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCa                                >  1:938787/1‑100 (MQ=255)
                                                                      tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc                               >  2:867791/1‑100 (MQ=255)
                                                                      tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc                               >  2:1574047/1‑100 (MQ=255)
                                                                       aTCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACt                              >  2:2201720/1‑100 (MQ=255)
                                                                           ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGTCGAAGCACTCggc                          <  2:2282807/100‑3 (MQ=255)
                                                                           ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                          >  2:921278/1‑100 (MQ=255)
                                                                           ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                          <  1:1727861/100‑1 (MQ=255)
                                                                           ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                          <  2:1391139/100‑1 (MQ=255)
                                                                           ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                          >  2:1471580/1‑100 (MQ=255)
                                                                             ccTACAAAACGCACTACCCGTAGGTCGGCTAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                        >  1:3019674/1‑100 (MQ=255)
                                                                             ccTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                        >  2:1897765/1‑100 (MQ=255)
                                                                              ntACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa                       >  1:1685121/2‑100 (MQ=255)
                                                                              cTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                        >  1:2773950/1‑99 (MQ=255)
                                                                              cTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa                       >  1:290353/1‑100 (MQ=255)
                                                                                aCAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTAcc                     <  1:168784/100‑1 (MQ=255)
                                                                                 cAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACCCGCCCTAcc                     >  1:2139506/1‑99 (MQ=255)
                                                                                   aaaCGCACTACCCTTAGGTCGGATACGGCTTTCACTCCGAATCCTACAGTGCATCCTAACCCGTAATCCCTAATAGTTCCGAAGCACTCGCCTTACCg                    <  1:2670444/98‑1 (MQ=255)
                                                                                   aaaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCt                  >  2:1422542/1‑100 (MQ=255)
                                                                                    aaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTc                 <  2:2378951/100‑1 (MQ=255)
                                                                                    aaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTc                 >  2:2835378/1‑100 (MQ=255)
                                                                                     aCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                <  2:1437259/100‑1 (MQ=255)
                                                                                     aCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                <  2:2832553/100‑1 (MQ=255)
                                                                                      cGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTACCCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                <  1:678232/99‑1 (MQ=255)
                                                                                        cACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTcaaca             <  1:855534/100‑1 (MQ=255)
                                                                                          cTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCaacaac           >  1:1904665/1‑100 (MQ=255)
                                                                                          cTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCaacaac           >  2:1931432/1‑100 (MQ=255)
                                                                                            aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc         >  1:2586518/1‑100 (MQ=255)
                                                                                            aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc         >  1:1491094/1‑100 (MQ=255)
                                                                                            aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc         >  2:1266489/1‑100 (MQ=255)
                                                                                             cccGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCa        >  2:2770310/1‑100 (MQ=255)
                                                                                               cGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCAtt      >  1:526729/1‑100 (MQ=255)
                                                                                                 tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTgg    >  2:902624/1‑100 (MQ=255)
                                                                                                  aGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGt   <  2:1996145/100‑1 (MQ=255)
                                                                                                   ggtcggataaggcgttcacgccgcatccgacctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagac  >  2:2031860‑M1/1‑1 (MQ=255)
                                                                                                   ggTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTc  <  1:1762220/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTC  >  NC_000913/72091‑72289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.