New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 72190NA (NA)8 (0.070) 7/164 NT NA noncoding (55/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 72220 NA (NA)noncoding (85/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 159 total aligned reads displayed.

AGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGCG  >  NC_000913/72121‑72319
                                                                                                   |                                                                                                   
 gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                                                                    >  2:2502713/1‑100 (MQ=255)
 gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACACCGCATCCGACa                                                                                                    >  2:122470/1‑100 (MQ=255)
  tCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAg                                                                                                   <  2:2708984/100‑1 (MQ=255)
    ttGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTg                                                                                                 <  1:1766510/100‑1 (MQ=255)
     tgtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTAACAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGc                                                                                                >  1:1815028/1‑100 (MQ=255)
      gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                                                                               >  1:3006769/1‑100 (MQ=255)
           ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACt                                                                                           <  1:7278/99‑1 (MQ=255)
           ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                                                                          <  2:2158257/100‑1 (MQ=255)
              tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAACCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                                                                       <  1:512188/100‑1 (MQ=255)
              tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTTCATACTAAcc                                                                                       <  1:2385707/100‑1 (MQ=255)
               gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATCCTAAccc                                                                                      >  1:16786/1‑100 (MQ=255)
               gCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAccc                                                                                      <  2:3088415/100‑1 (MQ=255)
                ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                                                     <  2:2115880/100‑1 (MQ=255)
                ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                                                     <  2:1750916/100‑1 (MQ=255)
                ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                                                     >  1:1653353/1‑100 (MQ=255)
                ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                                                                     <  2:933053/100‑1 (MQ=255)
                 cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                                                    >  2:167992/1‑100 (MQ=255)
                 cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                                                    >  1:630209/1‑100 (MQ=255)
                 cTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                                                    <  2:1174217/100‑1 (MQ=255)
                  tGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                                                                    >  2:11451/1‑99 (MQ=255)
                        gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTCCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATccc                                                                              <  2:3350006/99‑1 (MQ=255)
                        gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                                                                             <  1:501274/100‑1 (MQ=255)
                         aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                                                                            <  1:3305855/100‑1 (MQ=255)
                         aCGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCa                                                                            <  2:2273460/100‑1 (MQ=255)
                          cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                                                                           >  2:1486392/1‑100 (MQ=255)
                          cGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCaa                                                                           >  1:1266456/1‑100 (MQ=255)
                           gCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAAt                                                                          <  2:2340069/100‑1 (MQ=255)
                                 cgcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGcc                                                                    <  1:3047571/100‑1 (MQ=255)
                                  gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg                                                                   >  2:641855/1‑100 (MQ=255)
                                  gcgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCg                                                                   >  2:2784662/1‑100 (MQ=255)
                                      cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                                               <  1:2680035/100‑1 (MQ=255)
                                      cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                                               <  2:2833769/100‑1 (MQ=255)
                                      cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc                                                               <  2:3228223/100‑1 (MQ=255)
                                        tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc                                                             >  2:1574047/1‑100 (MQ=255)
                                        tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc                                                             >  2:867791/1‑100 (MQ=255)
                                         aTCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACt                                                            >  2:2201720/1‑100 (MQ=255)
                                           cAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCg                                                          >  1:1071900/1‑100 (MQ=255)
                                             ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                                                        <  2:1391139/100‑1 (MQ=255)
                                             ggCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc                                                        <  1:1727861/100‑1 (MQ=255)
                                               ccTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt                                                      >  2:1897765/1‑100 (MQ=255)
                                                ntACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa                                                     >  1:1685121/2‑100 (MQ=255)
                                                cTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa                                                     >  1:290353/1‑100 (MQ=255)
                                                 tACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTAc                                                    >  2:2416364/1‑100 (MQ=255)
                                                  aCAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTAcc                                                   <  1:168784/100‑1 (MQ=255)
                                                   cAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACCCGCCCTAcc                                                   >  1:2139506/1‑99 (MQ=255)
                                                     aaaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGc                                                 >  1:1434699/1‑99 (MQ=255)
                                                      aaCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTc                                               <  2:2378951/100‑1 (MQ=255)
                                                       aCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                                              <  2:2832553/100‑1 (MQ=255)
                                                       aCGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                                              <  2:1437259/100‑1 (MQ=255)
                                                        cGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTACCCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTca                                              <  1:678232/99‑1 (MQ=255)
                                                          cACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTcaaca                                           <  1:855534/100‑1 (MQ=255)
                                                            cTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCaacaac                                         >  2:1931432/1‑100 (MQ=255)
                                                            cTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCaacaac                                         <  2:532612/100‑1 (MQ=255)
                                                            cTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCaacaac                                         >  1:1904665/1‑100 (MQ=255)
                                                              aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc                                       >  2:1266489/1‑100 (MQ=255)
                                                              aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc                                       >  1:2586518/1‑100 (MQ=255)
                                                              aCCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTc                                       >  1:1491094/1‑100 (MQ=255)
                                                               cccGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCa                                      >  2:2770310/1‑100 (MQ=255)
                                                               cccGTAGGTCGGATAAGGCGTTCACGCCACATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCa                                      >  1:2649066/1‑100 (MQ=255)
                                                                 cGTAGGTCGGATGAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCAtt                                    >  1:2710922/1‑100 (MQ=255)
                                                                   tAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTgg                                  >  2:902624/1‑100 (MQ=255)
                                                                    ctgTCGGATGCGGCGTGAACGCCTTATCCGACAGTGCACACAAACCCGAAATCCCCAATCGAGCCGAAGCACTCGCCTCACCACTCAACAACACAttag                                  >  1:1362303/3‑97 (MQ=12)
                                                                    aGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGt                                 >  1:79269/1‑100 (MQ=255)
                                                                    aGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGt                                 <  2:1996145/100‑1 (MQ=255)
                                                                      gTCGGATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagact                               <  2:1647535‑M2/100‑71 (MQ=255)
                                                                      gTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCa                               >  1:1896983/1‑100 (MQ=255)
                                                                      gTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCa                               >  1:2484109/1‑100 (MQ=255)
                                                                       tCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTgagatc                              >  2:145307/1‑95 (MQ=255)
                                                                        cGGATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactat                             <  2:33248‑M2/100‑73 (MQ=255)
                                                                        cGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATa                             <  1:1478245/100‑1 (MQ=255)
                                                                         ggATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATAc                            >  2:2681623/1‑100 (MQ=255)
                                                                          gATAAGGCGTTCACGCCGCATCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatct                           <  1:2477603‑M2/100‑75 (MQ=255)
                                                                           aTAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATAccc                          <  1:1312100/100‑1 (MQ=255)
                                                                             aaGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTACTCCCCGGTAGTGCCGAAGCAGTCGCCTTACAGCTCAACAACTCATTGGTCATACCCTg                        >  1:379621/1‑100 (MQ=255)
                                                                              aGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGc                       >  1:3036674/1‑100 (MQ=255)
                                                                                gCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCa                     <  2:2994651/100‑1 (MQ=255)
                                                                                 cGTTCCCGCCGCATCCGACAGTGCATACTAACCCGTAATCCACAATAGTGCCGAATCACTACCCTTACCGAGCAACAACTCACTGTGCATACCCTg                        >  1:2881590/1‑96 (MQ=255)
                                                                                 cGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAg                    <  2:433807/100‑1 (MQ=255)
                                                                                  gTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAgg                   <  2:2917507/100‑1 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                 <  1:429462/100‑1 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                 >  1:1557557/1‑100 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                 >  2:2852214/1‑100 (MQ=255)
                                                                                    tCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCg                 >  2:2931014/1‑100 (MQ=255)
                                                                                      aCGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAATTCATTGGTCATACCCTGCCAGGCGAt               <  2:2065086/100‑1 (MQ=255)
                                                                                       cgccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCTCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATg              <  1:1041800/100‑1 (MQ=255)
                                                                                        gccgcATCCGAGAGTGCATACTAACCCGTAATCCCCAATAGTTCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATgc             <  2:3352463/100‑1 (MQ=255)
                                                                                         ccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATgcg            <  1:1020797/100‑1 (MQ=255)
                                                                                         ccgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATgc             >  1:1018708/1‑99 (MQ=255)
                                                                                          cgcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATgcgc           >  1:1400371/1‑100 (MQ=255)
                                                                                           gcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGcc          <  1:2751771/100‑1 (MQ=255)
                                                                                           gcATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGcc          <  2:2367961/100‑1 (MQ=255)
                                                                                              tCCGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccacttta       >  2:1448002‑M2/1‑6 (MQ=255)
                                                                                                cGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacg     >  2:1310576‑M2/1‑4 (MQ=255)
                                                                                                cGACctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacg     >  1:3228195‑M2/1‑4 (MQ=255)
                                                                                                cGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCg     >  2:1052751/1‑100 (MQ=255)
                                                                                                cGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCg     >  1:3254192/1‑100 (MQ=255)
                                                                                                  aCctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacgca   >  1:2038912‑M2/1‑2 (MQ=255)
                                                                                                   cctacgggtagtgcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcaacccgcacaagactatctcctaaaccccaaccactttacgcaa  <  2:3242983‑M2/100‑100 (MQ=255)
                                                                                                   cAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGCg  >  2:2183613/1‑100 (MQ=255)
                                                                                                   cAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGCg  <  2:2029856/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTACCGCTCAACAACTCATTGGTCATACCCTGCCAGGCGATGCGCCCGTCGGCG  >  NC_000913/72121‑72319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.