New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2304590109 (0.880)20 (0.180) 9/164 NT 16.6% noncoding (174/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 2304721 NA (NA)noncoding (305/655 nt) REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 181 total aligned reads displayed.

GTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAA  >  NC_000913/2304491‑2304689
                                                                                                   |                                                                                                   
gTCTTATCAGGCCTACACCGCTCTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGAT                                                                                                     >  1:1962172‑M1/1‑100 (MQ=255)
  cTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGc                                                                                                   <  2:2029940/100‑1 (MQ=255)
  cTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGc                                                                                                   <  2:286670/100‑1 (MQ=255)
   ttATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCg                                                                                                  >  2:1174874/1‑100 (MQ=255)
    tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACGTCCATCGCCCGAGGCGGGTGCGTGATGCg                                                                                                  >  1:2387526/1‑99 (MQ=17)
    tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATccga                                                                                                 >  1:546335‑M1/1‑96 (MQ=255)
    tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCg                                                                                                  >  2:3279967/1‑99 (MQ=255)
    tATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGa                                                                                                 >  2:427864/1‑100 (MQ=255)
     aTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                >  1:3232853/1‑100 (MQ=255)
     aTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                >  2:185073/1‑100 (MQ=255)
     aTCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGAc                                                                                                >  2:828846/1‑100 (MQ=255)
       cAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGc                                                                                              >  2:2972312/1‑100 (MQ=255)
       cAGGCCTACACCGCTGTGAAATGCCGCACCCCGGAGGTCAGACAAGGCGGTCACGCCGCGTCCGACACCCAACGGCCGAGGCGGTAGTCTGATGCGAc                                                                                                >  1:1862159/1‑98 (MQ=17)
        aGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCt                                                                                             >  2:3389223/1‑100 (MQ=255)
        aGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCt                                                                                             >  2:447916/1‑100 (MQ=255)
           ccTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgc                                                                                          >  1:3244002/1‑100 (MQ=255)
            cTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGATAAGGCGGTTACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                                                                         <  2:1334540/100‑1 (MQ=255)
            cTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                           <  1:3284232/98‑1 (MQ=40)
            cTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGgcg                                                                                         <  1:1516434/100‑1 (MQ=40)
            cTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACACCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTgg                                                                                           <  2:411403/98‑1 (MQ=255)
              acacCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGGCGCTGgcg                                                                                         >  1:1334535/1‑98 (MQ=255)
               cacCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACACCCAACGCCCTAGCCGAGTGCCTGATGCGACGCTGgcg                                                                                         >  1:2351446/1‑97 (MQ=11)
                acCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     >  2:2503675/1‑100 (MQ=35)
                acCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     <  2:3108833/100‑1 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcg                                                                                    <  2:2418337‑M1/100‑18 (MQ=255)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  1:2027921/1‑100 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  2:1682063/1‑100 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    <  2:146177/100‑1 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    <  2:2994230/100‑1 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  1:91261/1‑100 (MQ=35)
                 ccGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCt                                                                                    >  2:1048548/1‑100 (MQ=35)
                   gccgtgaagTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgca                                                                                  <  2:1363257‑M1/97‑20 (MQ=255)
                   gCTGGGAGGTGCGGCACCCCGTAGGTCGGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTc                                                                                     <  1:256398/97‑1 (MQ=255)
                    cTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCT‑‑acgcgccagcgtcgcatcagg                                                                                 <  2:1286768‑M1/99‑22 (MQ=255)
                        gAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcagg                                                                             <  1:185073‑M1/100‑25 (MQ=255)
                         aaGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggc                                                                            <  2:1947339‑M1/100‑26 (MQ=255)
                          aGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggca                                                                           <  2:946459‑M1/100‑27 (MQ=255)
                           gTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaa                                                                          <  2:3201753‑M1/100‑28 (MQ=255)
                             gCGGTACCCCGTAGGTCATACAAGGCGATCACGCCGCATCAGACATCCAACGCCCGAGCCGGTTGCCTGATaagtcgcgccagcgtcgcatcaggcaac                                                                         <  1:2493446‑M1/99‑29 (MQ=255)
                             gCGGCACCCCGGAGGTCAGACAAGTCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaacc                                                                        <  1:3108598‑M1/100‑30 (MQ=255)
                               tccacCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccgg                                                                      <  2:2647816‑M1/98‑32 (MQ=255)
                                          ggttggagaaggcggttaCGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATaagacgcgccagcgtcgcatcaggcaaccggctcggacgttg                                                           <  1:2359408‑M1/92‑43 (MQ=255)
                                             cAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCt                                                        >  2:318181/1‑100 (MQ=11)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      >  2:233732/1‑100 (MQ=32)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      >  1:2936008/1‑100 (MQ=32)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      <  2:1643726/100‑1 (MQ=32)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      <  1:1648106/100‑1 (MQ=32)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      >  2:576123/1‑100 (MQ=32)
                                               gACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTcc                                                      >  2:620814/1‑100 (MQ=32)
                                                 cAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCCGATCAGGCCTACATCGCTGTGCAGGGcaccac                                                    >  2:2199235/1‑100 (MQ=11)
                                                   aGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCAccc                                                  <  1:2115362/100‑1 (MQ=38)
                                                      cGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGctccgctccg                                                >  1:2886206/1‑99 (MQ=12)
                                                      cGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGt                                               >  2:3308440/1‑100 (MQ=35)
                                                      cGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGt                                               >  1:1700413/1‑100 (MQ=38)
                                                       ggTCACGCCGCATCCGACATCCCACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                                              <  1:654418/100‑1 (MQ=38)
                                                       ggTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                                              <  1:2247151/100‑1 (MQ=38)
                                                       ggTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTa                                              <  1:2152945/100‑1 (MQ=38)
                                                        gTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAg                                             <  2:1083800/100‑1 (MQ=38)
                                                          cACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAgg                                            <  1:2275064/99‑1 (MQ=35)
                                                            cgccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCg                                         <  2:1378824/100‑1 (MQ=33)
                                                             gccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCgg                                        <  1:284549/100‑1 (MQ=33)
                                                              ccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                       >  2:627126/1‑100 (MQ=33)
                                                              ccgcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                       <  2:172303/100‑1 (MQ=32)
                                                                gcATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATa                                     <  1:2912745/100‑1 (MQ=33)
                                                                 cgtgcgccATTCAGCGCTCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAgg                                            <  2:1392489/85‑1 (MQ=11)
                                                                  aTCCGGCATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGAt                                      <  1:653440/97‑1 (MQ=12)
                                                                  aTCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAg                                   >  2:1115744/1‑100 (MQ=33)
                                                                  aTCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAg                                   <  2:674906/100‑1 (MQ=33)
                                                                     cGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCg                                >  2:238474/1‑100 (MQ=33)
                                                                       aCATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGt                              <  1:1934863/100‑1 (MQ=14)
                                                                        cATCCACCGCCCGACCCGGTTGCCAGCTGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCgg                               <  1:1029601/98‑1 (MQ=11)
                                                                        cATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGtt                             <  2:1015170/100‑1 (MQ=32)
                                                                         aTCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTa                            >  2:189443/1‑100 (MQ=33)
                                                                          tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc                           <  1:879054/100‑1 (MQ=33)
                                                                          tCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc                           >  1:386246/1‑100 (MQ=33)
                                                                          nccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAc                           >  2:1617734/2‑100 (MQ=18)
                                                                           ccAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTAcg                          >  1:3380084/1‑100 (MQ=17)
                                                                            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGCCGGATAAGGCGGTTAcgc                         <  2:2951271/100‑1 (MQ=17)
                                                                            cAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGAGCAGTGCTCCACCCCGTAGGTCGGAAAAGGCGGtt                             >  1:1709772/1‑96 (MQ=255)
                                                                             aaCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgcc                        >  1:1391481/1‑100 (MQ=32)
                                                                              aCGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccg                       <  2:2700439/100‑1 (MQ=33)
                                                                               cGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTAcgccgc                      <  2:2475972/100‑1 (MQ=32)
                                                                                 cccGAGCCGGTTGCCTGATGCGACACCGGCGCGTCATATCAGGCCTACACCGCCGTGAAGTGCTCCACCCCCTAGGCCGGATAAGGCGGTTAcgccgc                      >  1:1444682/1‑98 (MQ=11)
                                                                                       gtctgcggctgataagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtgg               <  1:3091075‑M1/91‑87 (MQ=255)
                                                                                       ggggaagcctgataagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtgga              <  1:976396‑M1/94‑88 (MQ=255)
                                                                                        gggtgtgctgataagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggag             <  1:831428‑M1/93‑89 (MQ=255)
                                                                                             gCCTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcactt        <  1:3367652‑M1/100‑94 (MQ=255)
                                                                                             gCCTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcactt        >  1:1080958‑M1/1‑7 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttc       >  2:299686‑M1/1‑6 (MQ=255)
                                                                                              ccTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttc       <  2:2220932‑M1/100‑95 (MQ=255)
                                                                                               cTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttca      >  2:1040249‑M1/1‑5 (MQ=255)
                                                                                               cTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagc            <  1:2688352‑M1/94‑90 (MQ=255)
                                                                                               cTGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggag             <  1:3278332‑M1/93‑89 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcac     >  2:3385478‑M1/1‑4 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcac     <  1:1189622‑M1/100‑97 (MQ=255)
                                                                                                tGATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccaacctacggggtggagcacttcac     <  1:1371329‑M1/100‑97 (MQ=255)
                                                                                                 gATaagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcaca    >  2:625346‑M1/1‑3 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgccctacggggtggagcacttcacag   >  1:589236‑M1/1‑1 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcacagc  <  1:1568262‑M1/100‑100 (MQ=255)
                                                                                                   taagacgcgccagcgtcgcatcaggcaaccggcttgggcgttagatgtcggatgcggcgtaaccgccttatccgacctacggggtggagcacttcac     <  2:776656‑M1/97‑97 (MQ=255)
                                                                                                   |                                                                                                   
GTCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTCAGACAAGGCGGTCACGCCGCATCCGACATCCAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAA  >  NC_000913/2304491‑2304689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.