New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2393130NA (NA)6 (0.050) 6/164 NT NA intergenic (‑89/+75) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 = 2393162 NA (NA)noncoding (32/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 161 total aligned reads displayed.

TAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393033‑2393229
                                                                                                 |                                                                                                   
tagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgt                                                                                                   <  1:1527227‑M1/100‑3 (MQ=255)
 agtaACATGGCGAGCTTTATTCCGTGTAAAAGTCCCATCAGGACCGGATTTTCAACGAATTCTAACGACAGAAAATTCTCTTCGGACTGGAGGTAATGTc                                                                                                  >  1:1168654/1‑100 (MQ=255)
  gtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcg                                                                                                 <  1:2304318‑M1/100‑5 (MQ=255)
    aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               <  2:1065772‑M1/100‑7 (MQ=255)
    aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               <  1:1533874‑M1/100‑7 (MQ=255)
    aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtacga                                                                                               >  1:867076‑M1/1‑94 (MQ=255)
    aaCATGGCGATCTTTATTCCTTGTAAAAGGCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               <  2:2430584‑M1/100‑7 (MQ=255)
     aCATGGTGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggat                                                                                              <  2:925675‑M1/100‑8 (MQ=255)
       aTGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGc                                                                                            >  2:1318453/1‑100 (MQ=255)
       aTGGCGATCTTTATGCCTTGTAAAAGTCCCGTCAGGACCGGATTGTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGc                                                                                            <  1:205680/100‑1 (MQ=255)
        tGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCa                                                                                           <  1:890136/100‑1 (MQ=255)
         ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          >  1:910734/1‑100 (MQ=255)
         ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          >  2:2696314/1‑100 (MQ=255)
         ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          >  1:1037083/1‑100 (MQ=255)
          gagATGTTTAGTCTGTGTTAAAGTCCGGCCCGGACCGGATTTGGAAGGACGTCTCACTACAAAAAATGGTCTTCGGACTGGGGGTAGTGTCGGAt                                                                                              <  1:3051929/93‑1 (MQ=255)
          gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                                         >  2:1784191/1‑100 (MQ=255)
          gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                                         >  2:457295/1‑100 (MQ=255)
           cGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcg                                                                                        <  2:2704700/100‑1 (MQ=255)
           cGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcg                                                                                        >  1:1637956/1‑100 (MQ=255)
                 ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                                  <  2:3032350/100‑1 (MQ=255)
                    ttCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGTATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcgg                                                                               <  1:1849003/100‑1 (MQ=255)
                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              >  2:1553147/1‑100 (MQ=255)
                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:710375/100‑1 (MQ=255)
                     tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              >  2:2549254/1‑100 (MQ=255)
                      ccTTGTAAAAGTCCCGGCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                             <  2:3353918/100‑1 (MQ=255)
                       cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGCAGGCGGCtt                                                                            >  2:2318855/1‑100 (MQ=255)
                       cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                                                            >  2:2136132/1‑100 (MQ=255)
                        ttGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTA                                                                           >  2:226123‑M2/1‑100 (MQ=255)
                        ttGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTA                                                                           >  1:1789438‑M2/1‑100 (MQ=255)
                          gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATC                                                                         <  2:2370915‑M2/100‑1 (MQ=255)
                          gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATC                                                                         >  2:2790825‑M2/1‑100 (MQ=255)
                           tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCC                                                                        >  2:2001577‑M2/1‑100 (MQ=255)
                            aaaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCG                                                                       >  2:1883102‑M2/1‑100 (MQ=255)
                              aaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgac                                                                     <  1:302370‑M1/100‑33 (MQ=255)
                              aaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAC                                                                     >  1:2094828‑M2/1‑100 (MQ=255)
                               aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                    <  2:3159470/100‑1 (MQ=255)
                                gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAccn                                                                   <  1:770503/100‑2 (MQ=255)
                                 tCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTa                                                                  <  2:910737/100‑1 (MQ=255)
                                    cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCTGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                               >  2:3391804/1‑100 (MQ=255)
                                     gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgacactaccc                                                              <  2:2656670‑M1/100‑40 (MQ=255)
                                     gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgacactacc                                                               <  1:2004829‑M1/99‑39 (MQ=255)
                                       cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                            <  1:3283541/100‑1 (MQ=255)
                                       cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                            >  1:1438378/1‑100 (MQ=255)
                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:2886503/100‑1 (MQ=255)
                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  1:1590771/100‑1 (MQ=255)
                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:1346582/100‑1 (MQ=255)
                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:1629227/100‑1 (MQ=255)
                                         ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  1:1588719/100‑1 (MQ=255)
                                           aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                                        <  2:1668230/100‑1 (MQ=255)
                                            ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                       >  1:31983/1‑100 (MQ=255)
                                            ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                                       >  1:1749659/1‑100 (MQ=255)
                                             cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  2:2583175/100‑1 (MQ=255)
                                             cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      >  2:1799044/1‑100 (MQ=255)
                                             cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  2:1827658/100‑1 (MQ=255)
                                              ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                     >  2:308913/1‑100 (MQ=255)
                                              ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                     >  1:198748/1‑100 (MQ=255)
                                                 ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                  >  2:954182/1‑100 (MQ=255)
                                                 ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                  >  1:2352604/1‑100 (MQ=255)
                                                   ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                                <  1:2666066/100‑1 (MQ=255)
                                                    tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                                               <  1:2626570/100‑1 (MQ=255)
                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              <  2:1613942/100‑1 (MQ=255)
                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              >  1:1141818/1‑100 (MQ=255)
                                                     cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              <  2:675250/100‑1 (MQ=255)
                                                      aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                             >  1:644895/1‑100 (MQ=255)
                                                          aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                         <  2:1523349/100‑1 (MQ=255)
                                                          aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                         <  2:569787/100‑1 (MQ=255)
                                                          aaTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATc                                         <  2:2063022/100‑1 (MQ=255)
                                                            ttCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                                       <  2:3055836/100‑1 (MQ=255)
                                                              ctcACGACAGAACATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  2:775551/100‑1 (MQ=255)
                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     >  1:3245374/1‑100 (MQ=255)
                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  1:769620/100‑1 (MQ=255)
                                                              ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     >  2:337272/1‑100 (MQ=255)
                                                                  cGACAGAAAATGCTCTTCGGACTTGGGGTAGTGTCCGGTGCACCGCGAAGGCGGCTTATCCGACCTCCTTTCTTATAGGCCCAGGGGCAATCCcac                                     <  1:70046/96‑1 (MQ=255)
                                                                      aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                             <  1:430371/100‑1 (MQ=255)
                                                                       gAAAATTCTCTTCGGACTGGCGGTAGTGTCGGATGCACCGCCAACGCGGCTTGTCCGACCTCCATTCTTATACGCCCAGGGGCCATCCCACCATCCTTaa                            >  1:1871224/1‑100 (MQ=255)
                                                                        aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  1:3312372/100‑1 (MQ=255)
                                                                         aaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACt                          >  2:554316/1‑100 (MQ=255)
                                                                             tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc                      <  2:2334311/100‑1 (MQ=255)
                                                                               tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                    >  1:423697/1‑100 (MQ=255)
                                                                                 ttCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAg                  <  1:3205585/100‑1 (MQ=255)
                                                                                  tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAGCTCAACGCAGt                 <  1:2600916/100‑1 (MQ=255)
                                                                                  tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                 <  1:2475514/100‑1 (MQ=255)
                                                                                  tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                 <  1:1205632/100‑1 (MQ=255)
                                                                                  tCGGACTGGGGGTAGTGTCGGACGCACCGCGCAGGCGCCTGATGCGACCTACGTTCATATATGCCGAGGGGCAATACCACAATCCTTGACTCAACGCa                   >  1:248303/1‑98 (MQ=255)
                                                                                   cGGACTGGGGGTAGTGTCGGATGCACTGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTa                <  2:1077935/100‑1 (MQ=255)
                                                                                     gACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAcc              >  2:2030525/1‑100 (MQ=255)
                                                                                      aCTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCa             <  2:284944/100‑1 (MQ=255)
                                                                                       cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt            <  1:1445916/100‑1 (MQ=255)
                                                                                         gggggTAGTGTCGGATGCCCCGCGAACGCGGCTTATCCGACCTACGTTCTTATATGCCCAGAGGCAATCCCACAAACCTTAACTCAGCGCAGTACCATc           <  1:1308183/99‑1 (MQ=38)
                                                                                         gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          >  1:1363831/1‑100 (MQ=255)
                                                                                           gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgac        <  2:2656670‑M2/100‑62 (MQ=255)
                                                                                            ggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgac        <  1:2004829‑M2/99‑62 (MQ=255)
                                                                                               aGTGTCGGATGCCCCGCGAAGGCGGCTCATCCGACCTACGTTCTTCTATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCACTACCATCaa         >  1:2103071/1‑95 (MQ=255)
                                                                                               aGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgacggga    <  1:3320374‑M2/100‑66 (MQ=255)
                                                                                               aGTGTCGGATCCACCGCGAAGGCGGCTTATCCGCCCTACGTTCTTATATGCCCAGGCGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg    <  1:66364/100‑1 (MQ=255)
                                                                                                gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaactttctgtcgtgagaattcgttgaaaatccggtcctgacgggac   <  1:2175192‑M2/100‑67 (MQ=255)
                                                                                                gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc   <  1:1553140/100‑1 (MQ=255)
                                                                                                gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc   >  1:1193080/1‑100 (MQ=255)
                                                                                                 tgtCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgacgggact  <  2:1377585‑M2/100‑68 (MQ=255)
                                                                                                 tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc  <  2:2873491/100‑1 (MQ=255)
                                                                                                 |                                                                                                   
TAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393033‑2393229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.