New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3962704 =NA (NA)6 (0.050) 6/166 NT NA noncoding (5/36 nt) REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3962736 = NA (NA)intergenic (+38/+9) rep/gpp DNA helicase and single‑stranded DNA‑dependent ATPase/guanosine pentaphosphatase/exopolyphosphatase

Only 100 of 225 total aligned reads displayed.

CGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAA  >  NC_000913/3962606‑3962803
                                                                                                  |                                                                                                    
ggctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGc                                                                                                     <  2:2912514‑M1/2‑1 (MQ=255)
ggctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGc                                                                                                     <  1:285703‑M1/2‑1 (MQ=255)
 gctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGcc                                                                                                    <  1:1049482‑M1/3‑1 (MQ=255)
 gcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGcc                                                                                                    >  1:1225411/1‑100 (MQ=255)
 gcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGcc                                                                                                    >  1:1390479/1‑100 (MQ=255)
  cAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCg                                                                                                   >  2:764359/1‑100 (MQ=255)
  cAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCg                                                                                                   >  2:273754/1‑100 (MQ=255)
   taacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggcagtgcattaatgagtaagtGcc                                                                                                    <  1:1652291‑M1/3‑1 (MQ=255)
   taacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCg                                                                                                   <  1:706283‑M1/4‑1 (MQ=255)
    aacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGa                                                                                                 <  2:81987‑M1/6‑1 (MQ=255)
    aaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGa                                                                                                 >  1:625323/1‑100 (MQ=255)
     acccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCgg                                                                                                  <  1:1012405‑M1/5‑1 (MQ=255)
      gTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaa                                                                                               <  2:1160943/100‑1 (MQ=255)
       tGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaaa                                                                                              <  1:884185/100‑1 (MQ=255)
       tGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaaa                                                                                              <  2:468557/100‑1 (MQ=255)
          tCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGAt                                                                                           >  1:2165049/1‑100 (MQ=255)
           cAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATg                                                                                          >  1:2200691/1‑100 (MQ=255)
            agcgaagaagaaCGGATGCAGAAAGGGCAAAGCAATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATg                                                                                          <  1:1477834/93‑1 (MQ=255)
             gcgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCg                                                                                        <  1:2151804/100‑1 (MQ=255)
             gcgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCg                                                                                        >  2:1013146/1‑100 (MQ=255)
               gcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTc                                                                                      <  2:2796676/100‑1 (MQ=255)
               gcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTc                                                                                      <  1:969872/100‑1 (MQ=255)
                 cGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAg                                                                                    >  1:1832150/1‑100 (MQ=255)
                  gaagaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgc                                                                                   >  1:2926146/1‑100 (MQ=255)
                    agaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcat                                                                                 >  2:2068360/1‑100 (MQ=255)
                      aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcg                                                                               <  1:3062122/100‑1 (MQ=255)
                      aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcg                                                                               <  2:562792/100‑1 (MQ=255)
                       aCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgc                                                                              >  1:2729879/1‑100 (MQ=255)
                        cGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgca                                                                             <  2:864305/100‑1 (MQ=255)
                        cGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgca                                                                             >  2:426585/1‑100 (MQ=255)
                        cGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgca                                                                             <  2:2152538/100‑1 (MQ=255)
                           aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATcc                                                                          >  1:2110463/1‑100 (MQ=255)
                              ttattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                       >  2:1929280‑M1/69‑100 (MQ=255)
                              cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                       >  2:2654574/1‑100 (MQ=255)
                              cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                       >  2:326725/1‑100 (MQ=255)
                              cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                       >  1:2336074/1‑100 (MQ=255)
                                    cgcaggaaagtcagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAACAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                 >  1:2227787‑M1/63‑100 (MQ=255)
                                     ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                 >  2:2205367/1‑99 (MQ=255)
                                     ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                 >  1:1268489/1‑99 (MQ=255)
                                       cAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                              >  2:2250176/1‑100 (MQ=255)
                                         aaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCa                                                              <  1:2082906/98‑1 (MQ=255)
                                          aGCCATCTGGCGAAGCTGAAAGCGATGATGGCGGAAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTa                                                           <  1:1414681/100‑1 (MQ=255)
                                           gCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTaa                                                          <  2:695445/100‑1 (MQ=255)
                                             cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                         <  1:1608794/99‑1 (MQ=255)
                                             cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                        <  1:2453910/100‑1 (MQ=255)
                                             cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                        <  2:1319795/100‑1 (MQ=255)
                                              aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                       >  2:1804333/1‑100 (MQ=255)
                                                cTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                       <  2:1381108/98‑1 (MQ=255)
                                                 tGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCaga                                                    >  2:2369733/1‑98 (MQ=255)
                                                  ggCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACtt                                                   >  2:1118128/1‑100 (MQ=255)
                                                  ggCGAACCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATACTCAACGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAGTGCACtt                                                   >  1:356654/1‑100 (MQ=38)
                                                    cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                 <  2:3103684/100‑1 (MQ=255)
                                                    cGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTcc                                                 >  2:1632491/1‑100 (MQ=255)
                                                      aaTCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAg                                               <  2:546845/100‑1 (MQ=255)
                                                       aTCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGc                                              <  2:2315490/100‑1 (MQ=255)
                                                        tCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCACCGCATCCGGCACTTACTCATTAATGCACTTCCAGCg                                             <  2:2386002/100‑1 (MQ=255)
                                                          tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                           >  1:2370847/1‑100 (MQ=255)
                                                          tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                           >  2:2190709/1‑100 (MQ=255)
                                                          tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                           >  1:1785980/1‑100 (MQ=255)
                                                           gAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGcc                                          <  2:1346094/100‑1 (MQ=255)
                                                           gAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGcc                                          >  2:2892111/1‑100 (MQ=255)
                                                           gAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGcc                                          <  2:3148950/100‑1 (MQ=255)
                                                            aaaGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCa                                         <  1:538755/100‑1 (MQ=255)
                                                              aGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                           >  2:669388/1‑96 (MQ=255)
                                                                cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCAGTTCCAGCGGCCAGTgg                                     <  1:442462/100‑1 (MQ=255)
                                                                  atgatgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGAc                                   <  2:1422475/100‑1 (MQ=255)
                                                                     atgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATa                                <  2:1959585/100‑1 (MQ=255)
                                                                       ggcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGc                              <  2:1085197/100‑1 (MQ=255)
                                                                        gcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGct                             >  1:2774747/1‑100 (MQ=255)
                                                                        gcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGct                             >  2:2721121/1‑100 (MQ=255)
                                                                        gcggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGCACATAGct                             >  1:2794482/1‑100 (MQ=255)
                                                                         cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctc                            >  2:2622032/1‑100 (MQ=255)
                                                                         cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctc                            <  2:893993/100‑1 (MQ=255)
                                                                         cggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctc                            <  1:2423839/100‑1 (MQ=255)
                                                                          ggcAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGctct                           <  1:1532024/100‑1 (MQ=255)
                                                                             aaaaCGAGTGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGcc                       <  2:2999554/100‑1 (MQ=255)
                                                                             aaaaCGAGGGAAATCCTCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGCACATAGCTCTGcc                       >  1:1106190/1‑100 (MQ=255)
                                                                                aCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                    <  1:3251429/100‑1 (MQ=255)
                                                                                aCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACt                    >  1:943348/1‑100 (MQ=255)
                                                                                 cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTg                   >  1:402323/1‑100 (MQ=255)
                                                                                 cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTg                   <  2:2984358/100‑1 (MQ=255)
                                                                                   aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                 >  2:3184745/1‑100 (MQ=255)
                                                                                   aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                 >  1:1361597/1‑100 (MQ=255)
                                                                                   aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGCAGAGCTATGTCCACTGGc                 <  2:1874580/100‑1 (MQ=37)
                                                                                    gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                 <  2:1845155/99‑1 (MQ=255)
                                                                                    gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCt                >  2:160021/1‑100 (MQ=255)
                                                                                    gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCt                >  1:2686232/1‑100 (MQ=255)
                                                                                    gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCt                >  1:2577924/1‑100 (MQ=255)
                                                                                     ggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCtt               <  2:384597/100‑1 (MQ=255)
                                                                                      gAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCttt              >  2:2007838/1‑100 (MQ=255)
                                                                                          taatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTg          <  2:1230469/100‑1 (MQ=255)
                                                                                          taatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTg          >  1:2364351/1‑100 (MQ=255)
                                                                                           aatCAAGGCCGGAAAAGATGCGTTAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGa         <  1:490595/100‑1 (MQ=255)
                                                                                           aatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGa         >  2:401916/1‑100 (MQ=255)
                                                                                            atCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg        <  1:2490552/100‑1 (MQ=255)
                                                                                             tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:1785991/100‑1 (MQ=255)
                                                                                             tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  1:2696017/100‑1 (MQ=255)
                                                                                             tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCAGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:154125/100‑1 (MQ=255)
                                                                                                 ggCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaataa  >  2:1486421/1‑100 (MQ=255)
                                                                                                 ggCCAGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCGAGTGGACATAGCTCTGCCACTGGCTTTCCTGAg        <  1:2582422/95‑1 (MQ=255)
                                                                                                  |                                                                                                    
CGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAA  >  NC_000913/3962606‑3962803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.