New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 277706NA (NA)9 (0.080) 6/164 NT NA noncoding (32/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 277737 NA (NA)noncoding (63/67 nt) REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences REP22 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 197 total aligned reads displayed.

GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836
                                                                                                   |                                                                                                   
gcgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGC                                                                                                     >  2:2001546‑M2/1‑100 (MQ=255)
 cgAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGcc                                                                                                    <  1:756119/100‑1 (MQ=255)
    ngCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTAc                                                                                                 >  1:7/2‑100 (MQ=255)
    aGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTAc                                                                                                 >  2:658286/1‑100 (MQ=255)
       tGAGGGTTTATCGGGTCTACATCGTTAATTGTTTGCATGAAAAGCGCGTCGCATCAGGACATGCCGTATTGCGCCACAAGCGCTTTATCTTGCCCACaaa                                                                                              >  1:1028946/1‑100 (MQ=255)
        gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                                             <  2:811192/100‑1 (MQ=255)
        gAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACaaaa                                                                                             >  1:1027279/1‑100 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  1:1086779/100‑1 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            <  2:3197970/100‑1 (MQ=255)
         aGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAc                                                                                            >  1:972816/1‑100 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           <  1:2975572/100‑1 (MQ=255)
          gggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAAcc                                                                                           >  2:67918/1‑100 (MQ=255)
           ggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                                                          <  1:1330521/100‑1 (MQ=255)
           ggTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACca                                                                                          <  1:865579/100‑1 (MQ=255)
            gTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACcac                                                                                         >  2:1404198/1‑100 (MQ=255)
                ttccgatCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaaaa                                                                                     <  1:1841278/94‑1 (MQ=255)
                aTCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACaaaa                                                                                     >  2:2035529/1‑100 (MQ=255)
                 tCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAAc                                                                                    <  2:2721553/100‑1 (MQ=255)
                  cGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACg                                                                                   <  2:2124063/100‑1 (MQ=255)
                   gggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACCAGCGCCTTATCCGGCCTACACAACCACAAAAca                                                                                   >  1:3121049/1‑98 (MQ=255)
                    ggTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGtt                                                                                 <  1:2127492/100‑1 (MQ=255)
                     gTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTa                                                                                >  2:3293143/1‑100 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                                             >  1:2300270/1‑100 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGc                                                                             >  2:887161/1‑100 (MQ=255)
                        tACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGATATg                                                                              >  1:3312992/1‑99 (MQ=255)
                         aCATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCGACAAAACCACAAAACGTTATGcc                                                                            >  1:1969701/1‑100 (MQ=255)
                          cATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCg                                                                           <  1:2867444/100‑1 (MQ=255)
                           aTCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGc                                                                          >  1:302632/1‑100 (MQ=255)
                             cGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCAt                                                                        <  1:928424/100‑1 (MQ=255)
                              gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                                                       <  2:105340/100‑1 (MQ=255)
                              gTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATc                                                                       >  1:3285334/1‑100 (MQ=255)
                                 cATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGc                                                                    <  1:1636165/100‑1 (MQ=255)
                                  aTTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGcc                                                                   <  1:333824/100‑1 (MQ=255)
                                         gCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGcaca                                                             >  1:1178169/1‑99 (MQ=255)
                                          ccTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaa                                                           <  2:1853062/100‑1 (MQ=255)
                                           cTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaac                                                          <  2:3181512/100‑1 (MQ=255)
                                            tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                                                         >  2:1528364/1‑100 (MQ=255)
                                            tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                                                         >  2:505695/1‑100 (MQ=255)
                                            tGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGaacaaaca                                                         <  2:87669/100‑1 (MQ=255)
                                              aTAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATg                                                       <  2:43409/100‑1 (MQ=255)
                                               tacgcgcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGc                                                      >  1:3014933/4‑100 (MQ=255)
                                               tAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACGACAAAGCGTTATGCTGCATCCGCCAGAACAAACATGc                                                      >  1:2288221/1‑100 (MQ=255)
                                                 agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                                                    >  2:994670/1‑100 (MQ=255)
                                                 agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                                                    <  2:547814/100‑1 (MQ=255)
                                                 agcgcagcgcATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCg                                                    >  1:2495450/1‑100 (MQ=255)
                                                    gcagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTAc                                                 <  1:3223434/100‑1 (MQ=255)
                                                     cagcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACg                                                <  1:1528357/100‑1 (MQ=255)
                                                      agcgcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgg                                               >  1:709222/1‑100 (MQ=255)
                                                       gcgcaTCAGTCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACgga                                              >  1:201121/1‑100 (MQ=255)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaac                                            <  1:2159761‑M2/100‑58 (MQ=255)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaac                                            <  2:2613974‑M2/100‑58 (MQ=255)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg                                            <  1:3387167/100‑1 (MQ=255)
                                                         gcaTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatg                                            >  2:1456745/1‑100 (MQ=255)
                                                          caTCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatgg                                           <  1:1870574/100‑1 (MQ=255)
                                                            tCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACggatggat                                         <  1:1793990/100‑1 (MQ=255)
                                                             cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt                                        <  1:346243/100‑1 (MQ=255)
                                                             cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt                                        <  2:1877466/100‑1 (MQ=255)
                                                             cAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGAtt                                        <  2:1237575/100‑1 (MQ=255)
                                                              tggCATTTCCGGCTGGCGACACAAGCGCCTTAACCGGCATATAGACCGGCGACACGTTATGCCGCATCCGCCAGAACCAACATGCCGTACggatgga                                          <  1:3183042/96‑1 (MQ=255)
                                                               ggCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcag                                      <  1:2534601‑M2/100‑64 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagct                                    <  2:2331379‑M2/100‑66 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    >  2:3069121/1‑100 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCaa                                    <  1:193825/100‑1 (MQ=255)
                                                                 cATTGCCGGATGGCGGCACAAGCGCCTTATCCAGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgatagaccctcagct                                    <  2:2514529‑M2/100‑66 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagctt                                   <  2:2194176‑M2/100‑67 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAg                                   <  1:2427635/100‑1 (MQ=255)
                                                                  aTTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAg                                   <  2:1952242/100‑1 (MQ=255)
                                                                    tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat                                 >  1:1554373/1‑100 (MQ=255)
                                                                    tGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGat                                 <  1:2040004/100‑1 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCAGAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                <  2:154181/100‑1 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  1:554214/1‑100 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  2:1088906/1‑100 (MQ=255)
                                                                     gCCGGATGGCGGCACAAGCGACTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGata                                >  1:2076950/1‑100 (MQ=255)
                                                                      ccGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataa                               >  2:1273587/1‑100 (MQ=255)
                                                                       cGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGataat                              <  2:1688445/100‑1 (MQ=255)
                                                                         gATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATAc                            <  1:1211372/100‑1 (MQ=255)
                                                                            ggcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGc                         >  1:2837892/1‑100 (MQ=255)
                                                                            ggcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGc                         >  1:169771/1‑100 (MQ=255)
                                                                             gcggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCt                        >  2:1769159/1‑100 (MQ=255)
                                                                              cggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTc                       >  2:1603168/1‑100 (MQ=255)
                                                                               ggcACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCg                      >  1:2567522/1‑100 (MQ=255)
                                                                                   caAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGa                  >  2:933002/1‑100 (MQ=255)
                                                                                   caAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGa                  >  2:1419264/1‑100 (MQ=255)
                                                                                    aaGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGAc                 >  2:130299/1‑100 (MQ=255)
                                                                                     aGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACg                >  2:2929051/1‑100 (MQ=255)
                                                                                        gcCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGCTTTCAAGATAATACTGCTCGCCGACGTcc             >  1:1430406/1‑100 (MQ=255)
                                                                                         ccTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCg            >  2:1624575/1‑100 (MQ=255)
                                                                                          cTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCgg           <  2:1103846/100‑1 (MQ=255)
                                                                                             aTCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgca        >  2:96636‑M2/1‑7 (MQ=255)
                                                                                              tCCGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcag       <  2:117944‑M2/100‑95 (MQ=255)
                                                                                              tCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc       >  2:1334230/1‑100 (MQ=255)
                                                                                              tCCGGCCAACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGc       <  1:2679267/100‑1 (MQ=255)
                                                                                               ccGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcagg      <  2:2488346‑M2/100‑96 (MQ=255)
                                                                                               ccGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCa      <  1:1771295/100‑1 (MQ=255)
                                                                                               ccGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCa      <  1:665742/100‑1 (MQ=255)
                                                                                                cGGCaatgcctgatgcgctgcgcttatcaggcctacaatgaacggtgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggc     <  2:2561369‑M2/100‑97 (MQ=255)
                                                                                                cGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAg     >  1:42027/1‑100 (MQ=255)
                                                                                                cGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAg     <  2:239918/100‑1 (MQ=255)
                                                                                                  gCaatgcctgatgcgctgcgcttatcaggcctacaatgaacgatgtagacccgataaaccctcagcttcgcgcttttaacgcggcgatatccgcaggcgt   >  2:388577‑M2/1‑2 (MQ=255)
                                                                                                   ccTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGAcg  <  1:1733295/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGAAGCTGAGGGTTTATCGGGTCTACATCGTTCATTGTAGGCCTGATAAGCGCAGCGCATCAGGCATTGCCGGATGGCGGCACAAGCGCCTTATCCGGCCTACAAAACCACAAAACGTTATGCCGCATCCGCCAGAACAAACATGCCGTACGGATGGATTTCAAGATAATACTGCTCGCCGACGTCCGGTTGCAGACG  >  NC_000913/277638‑277836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.