New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4102697 =NA (NA)10 (0.070) 9/168 NT NA noncoding (2/26 nt) REP300 (repetitive extragenic palindromic) element; contains 1 REP sequences REP300 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4102721 = NA (NA)noncoding (26/26 nt) REP300 (repetitive extragenic palindromic) element; contains 1 REP sequences REP300 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 213 total aligned reads displayed.

AATTCTTACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTCTAATGG  >  NC_000913/4102598‑4102795
                                                                                                   |                                                                                                  
gttccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccagtcaggaactcaatagcaaac                                                                                                    <  2:4174001‑M1/1‑1 (MQ=255)
gttccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcccggtaagtatccaggcaggaactcaatagcaaac                                                                                                    <  2:1014032‑M1/1‑1 (MQ=255)
   ccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagtaaaCCgg                                                                                                 >  2:849925‑M1/97‑100 (MQ=255)
   ccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCgg                                                                                                 >  2:714248‑M1/97‑100 (MQ=255)
   ccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCgg                                                                                                 <  2:2495172‑M1/4‑1 (MQ=255)
   ccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCgg                                                                                                 <  1:1496594‑M1/4‑1 (MQ=255)
   ccctctccacgagaaatttccccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCgg                                                                                                 <  2:323022‑M1/4‑1 (MQ=255)
    cTTACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGa                                                                                                >  1:1787541/1‑100 (MQ=255)
     ttACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGAt                                                                                               <  1:1157414/100‑1 (MQ=255)
     ttACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGAt                                                                                               >  1:1550406/1‑100 (MQ=255)
     ttACCTCTATCTGGGCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGGGAAATAAAGCTGCTTCCTTAATCCGGACAGCCGGa                                                                                                >  2:3973348/1‑99 (MQ=255)
       aCCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGa                                                                                             <  2:2910374/100‑1 (MQ=255)
        ccTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGaa                                                                                            >  1:3830870/1‑100 (MQ=255)
         ctctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGaan                                                                                           <  1:3208830/100‑2 (MQ=255)
         ctctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAAc                                                                                           <  1:1289572/100‑1 (MQ=255)
          tctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACt                                                                                          <  2:1079538/100‑1 (MQ=255)
          tctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACt                                                                                          >  1:3111256/1‑100 (MQ=255)
           ctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACt                                                                                          <  2:3959069/99‑1 (MQ=255)
           ctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTa                                                                                         >  1:2679085/1‑100 (MQ=255)
           ctATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTa                                                                                         <  1:2879580/100‑1 (MQ=255)
             aTCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAAc                                                                                       <  1:3648268/100‑1 (MQ=255)
             aTCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAAc                                                                                       >  2:1645794/1‑100 (MQ=255)
             aTCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAAc                                                                                       <  1:2949869/100‑1 (MQ=255)
                tGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGCAATAAACCTGATTCCTTAATCCCCACAGCCGGATGAACTAAc                                                                                       >  2:3357674/1‑97 (MQ=255)
                tGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGtt                                                                                    >  2:1873905/1‑100 (MQ=255)
                  gTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCg                                                                                  >  1:1336006/1‑100 (MQ=255)
                    cACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTc                                                                                >  2:3428554/1‑100 (MQ=255)
                    cACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTc                                                                                >  2:2883432/1‑100 (MQ=255)
                      cGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCg                                                                              >  1:1658784/1‑100 (MQ=255)
                      cGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCg                                                                              >  2:1310068/1‑100 (MQ=255)
                      cGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCg                                                                              >  1:3360881/1‑100 (MQ=255)
                       cccattagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCGGATGAACTAACGTTCGTCCgg                                                                             >  2:1351552‑M1/77‑100 (MQ=255)
                         aaaGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGtt                                                                           >  1:2148209/1‑100 (MQ=255)
                          aaGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGttt                                                                          <  1:912113/100‑1 (MQ=255)
                          aaGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGttt                                                                          >  1:1720843/1‑100 (MQ=255)
                           aGTCAAAGCCAGAGCTGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTg                                                                         <  1:4115251/100‑1 (MQ=255)
                            tagaccatatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaaaCCGGATGAACTAACGTTCGTCCGGTTTGc                                                                        >  1:4008147‑M1/72‑100 (MQ=255)
                            gTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTg                                                                         >  2:408259/1‑99 (MQ=255)
                            gTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGc                                                                        >  2:3151582/1‑100 (MQ=255)
                              cAAAGCCAGTGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCCGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCt                                                                       <  2:2729387/99‑1 (MQ=255)
                              cAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTa                                                                      <  2:3826652/100‑1 (MQ=255)
                              cAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTa                                                                      >  2:1836425/1‑100 (MQ=255)
                               aaaGCCAGCGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAGTCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTAt                                                                     <  2:145797/100‑1 (MQ=255)
                                naGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCCCAGCCGGATGAACTAACGTTCGTCCGGTTTGCTAtt                                                                    >  1:2221374/2‑100 (MQ=255)
                                 catatttattttatgtcaggcgtgctgttttcgcggtaagtatccaggcaggaactcaatagcaagCCGGATGAACTAACGTTCGTCCGGTTTGCTATTg                                                                   >  1:63477‑M1/67‑100 (MQ=255)
                                 aGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTg                                                                   <  1:4034704/100‑1 (MQ=255)
                                  gCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGa                                                                  >  1:76937/1‑100 (MQ=255)
                                  gCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGa                                                                  <  2:4027018/100‑1 (MQ=255)
                                  gCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCGTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTg                                                                   <  2:1391210/99‑1 (MQ=255)
                                   ccAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAg                                                                 <  1:377381/100‑1 (MQ=255)
                                   ccAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGCTCGTCCGGTTTGCTATTGAg                                                                 <  2:2544456/100‑1 (MQ=255)
                                    cagagcagagAAAATCGAAAGTTTAGGTACGGTGAAATAAACCTGCTTCCTTACTCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAg                                                                 <  2:543376/99‑1 (MQ=255)
                                         cagcGAACATCGAAATTTTAGGGACGATGAAATAAAGCTGCTTCCTTAATCCCCAGAGCCGGATGAACTAACGTTCGTCCGGTTTTCTATTGAGTTcctg                                                           <  2:1165613/100‑1 (MQ=255)
                                           gcGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCTGGCTGAACTCACGTTCGTCCGGTTTGCTATTGAGTTcctgcc                                                         >  2:2926674/1‑100 (MQ=255)
                                           gcGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcc                                                         <  1:248148/100‑1 (MQ=255)
                                           gcGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcc                                                         <  2:351176/100‑1 (MQ=255)
                                            cGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcct                                                        >  2:80665/1‑100 (MQ=255)
                                            cGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcct                                                        <  1:2612383/100‑1 (MQ=255)
                                             gAAAATTGAAATTTTAGTTACGTTTAAATAATCATGCTTCCGTAATCCCCACATCCGGATGAACTAACGTTCTTCCCGTTTGCTATTGAGtgc                                                              <  2:461716/93‑3 (MQ=255)
                                             gAAAATCGAACTTTTAGGTACGGTGAAATAAGCCTGCTTCCTTAATTCCCACAGCGGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcctg                                                       <  2:1564383/100‑1 (MQ=255)
                                             gAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTcctgcctg                                                       <  1:2499737/100‑1 (MQ=255)
                                               aaaTCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCGTTAATCCCCACAGCCGGATTAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGa                                                     <  2:2272827/100‑1 (MQ=255)
                                               aaaTCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGa                                                     <  1:1837764/100‑1 (MQ=255)
                                                aaTCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGAt                                                    <  1:3040619/100‑1 (MQ=255)
                                                aaTCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGAt                                                    >  2:2463508/1‑100 (MQ=255)
                                                  tCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATTCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATAc                                                  <  2:801874/100‑1 (MQ=255)
                                                  tCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATAc                                                  <  1:2845933/100‑1 (MQ=255)
                                                   cGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACt                                                 >  2:3273744/1‑100 (MQ=255)
                                                    gAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACtt                                                >  1:3713462/1‑100 (MQ=255)
                                                       aTTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTAcc                                             >  1:2064222/1‑100 (MQ=255)
                                                       aTTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTAcc                                             >  1:3133839/1‑100 (MQ=255)
                                                       aTTTTAGCTACGGTGAAATAAACCTGCTTCCTTAATCCCCTCAGCCGGATGAACTAACGTTCGTCCGGTGTGCTATTGAGTTCCTGCCTGGATACtt                                                <  2:3091062/97‑1 (MQ=255)
                                                        ttttAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACcg                                            <  1:1169815/100‑1 (MQ=255)
                                                         tttAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACcgc                                           <  1:3926896/100‑1 (MQ=255)
                                                         tttAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACcgc                                           <  1:3743944/100‑1 (MQ=255)
                                                           tAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTGACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGa                                         <  1:945378/100‑1 (MQ=255)
                                                             ggTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGaaa                                       <  1:1071190/100‑1 (MQ=255)
                                                             ggTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGaaa                                       <  1:2773508/100‑1 (MQ=255)
                                                             ggTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGaaa                                       <  1:9796/100‑1 (MQ=255)
                                                              gTACGGTGAAATAAACCTGCTTCCTTACTCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTCTTGAGTTCCTGCCTGGATACTTACCGCGaaaa                                      >  2:2900983/1‑100 (MQ=255)
                                                                 cGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAg                                   <  2:2328496/100‑1 (MQ=255)
                                                                  ggTGAAATAACCCTGCTTCCTTAATCCTCACAGCCGGATCAACTAACGTTCGTCCGGCTTGCTATTGAGTTCCTGCCCGGATACTTACCGCGAAAACAg                                   <  2:2049596/99‑1 (MQ=255)
                                                                  ggTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGc                                  >  1:1126970/1‑100 (MQ=255)
                                                                     gAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACg                               >  1:526981/1‑100 (MQ=255)
                                                                          aaaCCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGa                          >  1:2754442/1‑100 (MQ=255)
                                                                                 cTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACataaaa                   >  1:3489125/1‑100 (MQ=255)
                                                                                   tCCTTAATCCCCACAGCCGGATGAACTCACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTCCCGCGAAAACAGCACGCCTGACataaaata                 >  2:3702980/1‑100 (MQ=255)
                                                                                     cTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACataaaataaa               <  1:2958891/100‑1 (MQ=255)
                                                                                     cTTAACCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACataaaataaa               <  2:1037537/100‑1 (MQ=255)
                                                                                      ttAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACataaaaaaaa               >  2:3554901/1‑99 (MQ=255)
                                                                                        aaTCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAatat            >  2:4050237/1‑100 (MQ=255)
                                                                                        aaTCCCCACAGCCGGATGAACTAACGTTCGTCCGATTTGCTATTGCGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAaataaata             <  2:1228065/99‑1 (MQ=255)
                                                                                          tCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATgg          <  2:2115133/100‑1 (MQ=255)
                                                                                            cccACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGt         >  1:2495187/1‑99 (MQ=255)
                                                                                            cccACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTc        >  2:3895785/1‑100 (MQ=255)
                                                                                             ccACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTCt       >  1:2585245/1‑100 (MQ=255)
                                                                                             ccACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTCt       >  1:2021494/1‑100 (MQ=255)
                                                                                              cacaGCCGGATGAACTAACGTTCGTTCGGTTTGCTATTGAGTTCCTGCCTGGAGACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGt         <  2:2247840/97‑1 (MQ=255)
                                                                                              cacaGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGACTAGATACTTACCGCGAAAACAGCACGCCAAACAAAAAAAAAATATgg          <  2:2308860/96‑1 (MQ=255)
                                                                                                 aGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTCTAATg   <  2:1498957/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
AATTCTTACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAAACCTGCTTCCTTAATCCCCACAGCCGGATGAACTAACGTTCGTCCGGTTTGCTATTGAGTTCCTGCCTGGATACTTACCGCGAAAACAGCACGCCTGACATAAAATAAATATGGTCTAATGG  >  NC_000913/4102598‑4102795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.