New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4639660127 (0.840)4 (0.030) 3/168 NT 3.2% coding (647/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
?NC_000913 = 4639689 126 (0.890)coding (618/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
Rejected: Frequency below cutoff threshold.

Only 100 of 175 total aligned reads displayed.

CCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAG  >  NC_000913/4639562‑4639759
                                                                                                  |                                                                                                   
ccGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGAGAACCTTCACCGTGAATGGTGGCGATGATTtccggcgtatccgg                                                                                                    >  1:2911477/1‑100 (MQ=255)
      tttttGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGa                                                                                              <  1:1250101/100‑1 (MQ=255)
          tGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCg                                                                                          <  1:3799057/100‑1 (MQ=255)
           gACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGa                                                                                         >  2:2247275/1‑100 (MQ=255)
           gACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGa                                                                                         <  2:1650242/100‑1 (MQ=255)
            aCGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGaa                                                                                        <  1:1589119/100‑1 (MQ=255)
             cGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGaaa                                                                                       >  1:3294623/1‑100 (MQ=255)
                 ggtAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGtt                                                                                   <  2:1984400/100‑1 (MQ=255)
                   tAAAGCCGATTAATCTTCCAGATCACCACAGAAGCAATAACCTACACCGTGAATGCTGGCGCTGATTTCAGGCGTATCCGGCGTAGATTGGAAATGGTTa                                                                                 >  2:551992/1‑100 (MQ=255)
                    aaaGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTAc                                                                                <  1:247896/100‑1 (MQ=255)
                     aaGCCGATTAATCTTCCAGATCACCGGAGAAGCGATAACCTTCACCGTGAATTGTGGCGATGATTGCCGGCGTATCCGGCGTAGATTCGAAATGTTTACg                                                                               <  1:782624/100‑1 (MQ=255)
                     aaGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACg                                                                               <  1:3081873/100‑1 (MQ=255)
                     aaGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACg                                                                               <  1:410777/100‑1 (MQ=255)
                       gCCGATTAATCGTCCAGATCACCGCAGAAGCTATAACCTTCACCGTGTATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGaa                                                                             <  2:2814934/100‑1 (MQ=255)
                        ccGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAAt                                                                            >  1:4070026/1‑100 (MQ=255)
                        ccGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAAt                                                                            <  1:3515805/100‑1 (MQ=255)
                              aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcg                                                                      <  2:1086661‑M2/100‑3 (MQ=255)
                              aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcg                                                                      <  1:3931949‑M2/100‑3 (MQ=255)
                              aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcg                                                                      <  1:1070843‑M2/100‑3 (MQ=255)
                              aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGc                                                                       <  2:2498509‑M2/99‑2 (MQ=255)
                               ntcTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcgg                                                                     <  1:2137842‑M2/99‑4 (MQ=255)
                                 cTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGccgtattcgtaaacatttcgaatctacgccggat                                                                   <  1:187142‑M1/100‑35 (MQ=255)
                                 cTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcggat                                                                   <  1:2622519‑M2/100‑6 (MQ=255)
                                 cTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcgga                                                                    <  2:1683860‑M2/99‑5 (MQ=255)
                                  ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                  >  1:3540876/1‑100 (MQ=255)
                                  ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                  >  1:1488046/1‑100 (MQ=255)
                                  ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                  >  1:3114881/1‑100 (MQ=255)
                                   tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                 <  1:2216381/100‑1 (MQ=255)
                                   tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                 <  2:3841414/100‑1 (MQ=255)
                                   tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                 <  2:2356672/100‑1 (MQ=255)
                                    ccAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGt                                                                >  1:2882443/1‑100 (MQ=255)
                                    acAGATCACCGCAGAAGCGATAAACTTAACCGTGAATGGAGGCGATGAATTCCGGAGGAACCGGCGCAAGATAGAAAGGTTTACGAATAAGGCGGAtgg                                                                 >  2:1321286/2‑97 (MQ=255)
                                     cataTCACCGCTTAATCTATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                               <  1:767251/97‑1 (MQ=255)
                                     cAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                               <  2:2134148/100‑1 (MQ=255)
                                      aGATCACCGCAGAAGCGATCACCCTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCa                                                              <  1:3209611/100‑1 (MQ=255)
                                      aGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                               <  2:2149300/99‑1 (MQ=255)
                                      aGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCa                                                              <  1:3829489/100‑1 (MQ=255)
                                        aTCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACg                                                            <  2:3531843/100‑1 (MQ=255)
                                           aCCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCt                                                         <  1:2989167/100‑1 (MQ=255)
                                           aCCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCt                                                         <  2:947554/100‑1 (MQ=255)
                                            ccGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTa                                                        >  2:3013421/1‑100 (MQ=255)
                                             cGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTAc                                                       <  1:1194031/100‑1 (MQ=255)
                                             cGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTAc                                                       <  2:3486250/100‑1 (MQ=255)
                                              gCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACa                                                      >  1:2626202/1‑100 (MQ=255)
                                               cAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAg                                                     <  1:157188/100‑1 (MQ=255)
                                                aGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGt                                                    <  1:1968977/100‑1 (MQ=255)
                                                 gAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTa                                                   >  2:1943871/1‑100 (MQ=255)
                                                  aaGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTAc                                                  <  1:1709936/100‑1 (MQ=255)
                                                    gCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACgg                                                >  1:2868381/1‑100 (MQ=255)
                                                       aTAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCg                                             <  2:2441300/100‑1 (MQ=255)
                                                       aTAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCg                                             <  2:4134339/100‑1 (MQ=255)
                                                       aTAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCg                                             <  1:54364/100‑1 (MQ=255)
                                                            cTTCACCGTGAATTGTGGCGATGATTTCCGGCGTATCCGGCGGAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCgg                                        >  1:2821786/1‑100 (MQ=255)
                                                            cTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTCCAGTCGTGCgg                                        >  2:326458/1‑100 (MQ=255)
                                                            cTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCgg                                        <  2:3067307/100‑1 (MQ=255)
                                                            cTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCg                                         <  2:1411082/99‑1 (MQ=255)
                                                             ttCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGt                                       >  2:974768/1‑100 (MQ=255)
                                                              tCACCGTGAATGGTGGTGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGtt                                      <  2:2434761/100‑1 (MQ=255)
                                                                aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                    <  1:948132/100‑1 (MQ=255)
                                                                aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                    >  2:1022449/1‑100 (MQ=255)
                                                                aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                    <  2:1528874/100‑1 (MQ=255)
                                                                 ccGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCa                                   >  1:4128972/1‑100 (MQ=255)
                                                                 ccGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCa                                   >  2:3458674/1‑100 (MQ=255)
                                                                  cGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTGGTGCGGTTTCAg                                  <  1:2745106/100‑1 (MQ=255)
                                                                  cGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAg                                  <  2:846194/100‑1 (MQ=255)
                                                                      aaTGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCa                              >  2:822280/1‑100 (MQ=255)
                                                                        tggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACg                            <  1:1059747/100‑1 (MQ=255)
                                                                           tggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                         <  2:1839208/100‑1 (MQ=255)
                                                                           tggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                         <  1:1307654/100‑1 (MQ=255)
                                                                                 tgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAt                   >  2:1720236/1‑100 (MQ=255)
                                                                                   atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                 <  1:2619553/100‑1 (MQ=255)
                                                                                    tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                >  2:3602912/1‑100 (MQ=255)
                                                                                    tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                >  2:2934117/1‑100 (MQ=255)
                                                                                      tccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttct              <  1:1943881/100‑1 (MQ=255)
                                                                                        cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc            <  1:1006027/100‑1 (MQ=255)
                                                                                        cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc            <  1:2454036/100‑1 (MQ=255)
                                                                                         ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca           >  1:2441802/1‑100 (MQ=255)
                                                                                          gcgtatccggcgtaGATTCGAAATGTTTACGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctg          <  1:1176852‑M2/100‑63 (MQ=255)
                                                                                           cgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc         <  2:3482104/100‑1 (MQ=255)
                                                                                            gtatccggcgtaGATTCGAAATGTTTTCGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctgga        <  1:2529912‑M2/100‑65 (MQ=255)
                                                                                            gtatccggcgtaGATTCGAAATGTTTACGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctgga        <  1:809749‑M2/100‑65 (MQ=255)
                                                                                            gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagca        <  1:814018/100‑1 (MQ=255)
                                                                                             tatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagcag       <  1:525447/100‑1 (MQ=255)
                                                                                             tatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagcag       <  2:543206/100‑1 (MQ=255)
                                                                                              atccggcgtaGATTCGAAATGTTTACGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaag      <  1:187142‑M2/100‑67 (MQ=255)
                                                                                              atccggcataGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc         <  2:2746146/97‑1 (MQ=255)
                                                                                               tccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGTCCGGTCATTTTCTTCAGCAGtt     >  2:1375748/1‑100 (MQ=255)
                                                                                               tCCGccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaag      <  2:1683860‑M1/99‑96 (MQ=255)
                                                                                                ccggcgtaGATTCGAAATGTTTATGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc    >  2:263766/1‑100 (MQ=255)
                                                                                                ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGCTCATTTTCTTCAGCAGTTc    >  2:3810431/1‑100 (MQ=255)
                                                                                                ccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagat    <  2:3181888‑M1/100‑98 (MQ=255)
                                                                                                ccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagat    >  1:1604098‑M1/1‑3 (MQ=255)
                                                                                                ccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagan    <  1:2137842‑M1/100‑98 (MQ=255)
                                                                                                ccgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattaacggtgaaggttatcgcttctgcggtgatctggaagat    >  2:859218‑M1/1‑3 (MQ=255)
                                                                                                 cggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCa   >  2:4066033/1‑100 (MQ=255)
                                                                                                 cggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGGTTCAGCTCACGGCCGGTCATGTTCTTCAGAAGtt     >  2:2030755/1‑98 (MQ=255)
                                                                                                 cgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagatt   <  1:3931949‑M1/100‑99 (MQ=255)
                                                                                                 cgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagatt   <  2:2343886‑M1/100‑99 (MQ=255)
                                                                                                 cgccgtattcgtaaacatttcgaatctacgccggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaagatt   <  1:4094277‑M1/100‑99 (MQ=255)
                                                                                                  ggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAg  >  2:601321/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
CCGTTTTTTTTGACGGTGGTAAAGCCGATTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAG  >  NC_000913/4639562‑4639759

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.