New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4639660127 (0.840)4 (0.030) 3/168 NT 3.2% coding (647/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
?NC_000913 = 4639689 126 (0.890)coding (618/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
Rejected: Frequency below cutoff threshold.

Only 100 of 174 total aligned reads displayed.

TTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCA  >  NC_000913/4639590‑4639788
                                                                                                   |                                                                                                   
ttAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATAcgg                                                                                                     <  1:526291/100‑1 (MQ=255)
  aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcg                                                                                                   <  1:4094277‑M2/100‑3 (MQ=255)
  aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcg                                                                                                   <  1:3931949‑M2/100‑3 (MQ=255)
  aaTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGc                                                                                                    <  2:2498509‑M2/99‑2 (MQ=255)
   ntcTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcgg                                                                                                  <  1:2137842‑M2/99‑4 (MQ=255)
   aTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTTAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcgg                                                                                                  >  2:859218‑M2/1‑97 (MQ=255)
   aTCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGcgg                                                                                                  <  2:3181888‑M2/100‑4 (MQ=255)
      ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                                               >  1:3114881/1‑100 (MQ=255)
      ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                                               >  1:1488046/1‑100 (MQ=255)
      ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                                               >  1:3540876/1‑100 (MQ=255)
      ttCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGACGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATc                                                                                               >  2:1458639/1‑100 (MQ=255)
       tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                                              <  2:2356672/100‑1 (MQ=255)
       tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                                              <  1:2216381/100‑1 (MQ=255)
       tCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCg                                                                                              <  1:1544844/100‑1 (MQ=255)
        ccAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGt                                                                                             >  1:2882443/1‑100 (MQ=255)
        acAGATCACCGCAGAAGCGATAAACTTAACCGTGAATGGAGGCGATGAATTCCGGAGGAACCGGCGCAAGATAGAAAGGTTTACGAATAAGGCGGAtgg                                                                                              >  2:1321286/2‑97 (MQ=255)
         cataTCACCGCTTAATCTATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                                                            <  1:767251/97‑1 (MQ=255)
         cAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                                                            <  2:2134148/100‑1 (MQ=255)
         cAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                                                            >  1:3648105/1‑100 (MQ=255)
          aGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTc                                                                                            <  2:2149300/99‑1 (MQ=255)
          aGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCa                                                                                           >  1:1375808/1‑100 (MQ=255)
          aGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCa                                                                                           >  1:279128/1‑100 (MQ=255)
            aTCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACg                                                                                         <  2:3531843/100‑1 (MQ=255)
                 cGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTAc                                                                                    <  2:3486250/100‑1 (MQ=255)
                  gCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACa                                                                                   >  1:2626202/1‑100 (MQ=255)
                     gAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTa                                                                                >  2:1943871/1‑100 (MQ=255)
                      aaGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTAc                                                                               <  1:3877087/100‑1 (MQ=255)
                         cGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGt                                                                            >  2:3064312/1‑100 (MQ=255)
                          gATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTc                                                                           >  2:4164217/1‑100 (MQ=255)
                               ncTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTAAGGTCGTGCg                                                                      >  2:1681992/2‑100 (MQ=255)
                                cTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCgg                                                                     <  2:3067307/100‑1 (MQ=255)
                                 ttCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGt                                                                    >  2:974768/1‑100 (MQ=255)
                                 ttCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGt                                                                    >  1:2922788/1‑100 (MQ=255)
                                  tCACCGTGAATGGTGGTGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGtt                                                                   <  2:2434761/100‑1 (MQ=255)
                                  tCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGtt                                                                   <  1:898244/100‑1 (MQ=255)
                                    aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                                                 <  1:948132/100‑1 (MQ=255)
                                    aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                                                 >  2:1022449/1‑100 (MQ=255)
                                    aCCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTc                                                                 <  2:1528874/100‑1 (MQ=255)
                                     ccGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCa                                                                >  2:3458674/1‑100 (MQ=255)
                                      cGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTGGTGCGGTTTCAg                                                               <  1:2745106/100‑1 (MQ=255)
                                          aaTGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCa                                                           >  2:822280/1‑100 (MQ=255)
                                            tggtggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACg                                                         <  1:1059747/100‑1 (MQ=255)
                                               tggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGcc                                                      <  2:1839208/100‑1 (MQ=255)
                                                ggCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCg                                                     >  2:1099901/1‑100 (MQ=255)
                                                 gCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCgg                                                    >  1:2605232/1‑100 (MQ=255)
                                                     tgatTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAt                                                >  2:1720236/1‑100 (MQ=255)
                                                       atTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAttt                                              <  1:2619553/100‑1 (MQ=255)
                                                        tttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCAtttt                                             >  2:2934117/1‑100 (MQ=255)
                                                         ttCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttc                                            >  2:693373/1‑100 (MQ=255)
                                                          tccggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttct                                           <  1:1943881/100‑1 (MQ=255)
                                                            cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                         <  1:1006027/100‑1 (MQ=255)
                                                            cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                         <  1:2454036/100‑1 (MQ=255)
                                                            cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                         <  1:414953/100‑1 (MQ=255)
                                                            cggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTttcttc                                         <  1:2848299/100‑1 (MQ=255)
                                                             ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca                                        >  1:2441802/1‑100 (MQ=255)
                                                             ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca                                        <  1:2227183/100‑1 (MQ=255)
                                                             ggcgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTca                                        <  1:1296164/100‑1 (MQ=255)
                                                              gcgtatccggcgtaGATTCGAAATGTTTACGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctg                                       <  1:1176852‑M2/100‑63 (MQ=255)
                                                               cgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                      <  2:3482104/100‑1 (MQ=255)
                                                               cgtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                      <  1:751093/100‑1 (MQ=255)
                                                                gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTTTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                      <  2:192296/99‑1 (MQ=255)
                                                                gtatccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagca                                     <  1:814018/100‑1 (MQ=255)
                                                                 tattcttcgtaGATTCTAAATGTTTATGAATATGTCTGATCGTCACGTCTACATTATGGTCGTGCGGTTTCAGCTCTCTGCCGGTCATTTTTTTtagcag                                    <  2:1706871/93‑1 (MQ=255)
                                                                  atccggcgtaGATTCGAAATGTTTACGAATACGGcggatacgccggaaatcatcgccaccattcacggtgaaggttatcgcttctgcggtgatctggaag                                   <  1:187142‑M2/100‑67 (MQ=255)
                                                                  atccggcataGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTcagc                                      <  2:2746146/97‑1 (MQ=255)
                                                                   tccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGTCCGGTCATTTTCTTCAGCAGtt                                  >  2:1375748/1‑100 (MQ=255)
                                                                    ccggcgtaGATTCGAAATGTTTATGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                 >  2:263766/1‑100 (MQ=255)
                                                                    ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                 <  1:1183644/100‑1 (MQ=255)
                                                                    ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                 <  1:3827292/100‑1 (MQ=255)
                                                                    ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTc                                 >  1:3242529/1‑100 (MQ=255)
                                                                    ccggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGCTCATTTTCTTCAGCAGTTc                                 >  2:3810431/1‑100 (MQ=255)
                                                                     cggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCa                                >  2:4066033/1‑100 (MQ=255)
                                                                      ggcgtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAg                               >  2:601321/1‑100 (MQ=255)
                                                                         gtaGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCAc                            >  2:2304640/1‑100 (MQ=255)
                                                                           aGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACgg                          >  2:2393721/1‑100 (MQ=255)
                                                                           aGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACgg                          >  2:3835180/1‑100 (MQ=255)
                                                                            gATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACggg                         <  1:3347214/100‑1 (MQ=255)
                                                                             aTTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGa                        >  1:4163954/1‑100 (MQ=255)
                                                                              ttCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGAc                       <  1:2719621/100‑1 (MQ=255)
                                                                              ttCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGAc                       >  1:179885/1‑100 (MQ=255)
                                                                                  aaaTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGaa                   >  1:4074800/1‑100 (MQ=255)
                                                                                   aaTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAt                  <  1:2879762/100‑1 (MQ=255)
                                                                                   aaTGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAAt                  <  1:930593/100‑1 (MQ=255)
                                                                                       tttACGAATACGGCGGATCGTCACGTCTACAGTATGGTCGTGCGGTTTCAGCTCACGGCCGGACATTTTCTTCCGCCGTTCAGCACGGGACTGAAtttt               >  2:462492/1‑99 (MQ=255)
                                                                                       tttACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTg              <  1:3061655/100‑1 (MQ=255)
                                                                                       tttACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTg              <  2:3546839/100‑1 (MQ=255)
                                                                                          aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCt           <  2:1567922/100‑1 (MQ=255)
                                                                                          aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCt           >  1:3062453/1‑100 (MQ=255)
                                                                                          aCGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCt           >  2:796033/1‑100 (MQ=255)
                                                                                           cGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTg          >  1:1656824/1‑100 (MQ=255)
                                                                                           cGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTg          <  1:3539425/100‑1 (MQ=255)
                                                                                             aaTACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTggg        <  1:1086664/100‑1 (MQ=255)
                                                                                               tACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGtt      <  1:49837/100‑1 (MQ=255)
                                                                                                aCGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGttt     >  2:1694712/1‑100 (MQ=255)
                                                                                                  ggcggATCGTCAGGTCTACAGTATGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTc   <  1:1601353/100‑1 (MQ=255)
                                                                                                  ggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTc   <  2:1880848/100‑1 (MQ=255)
                                                                                                  ggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTc   >  2:1790021/1‑100 (MQ=255)
                                                                                                  ggcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTc   <  2:3031938/100‑1 (MQ=255)
                                                                                                   gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTca  <  2:1511015/100‑1 (MQ=255)
                                                                                                   gcggATCGTCACGTCTACAGTACGGTCGTGCGGTTGCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTAAGCACGGGACTGAATTTTGCCTggg        <  2:4104045/94‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTAATCTTCCAGATCACCGCAGAAGCGATAACCTTCACCGTGAATGGTGGCGATGATTTCCGGCGTATCCGGCGTAGATTCGAAATGTTTACGAATACGGCGGATCGTCACGTCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCA  >  NC_000913/4639590‑4639788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.