| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1040547 = | NA (NA) | 19 (0.140) | 9/158 | NT | NA | noncoding (5/36 nt) | REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 1040579 = | NA (NA) | intergenic (+42/‑38) | cbdX/appA | putative cytochrome bd‑II oxidase subunit/phosphoanhydride phosphorylase | |||||
Only 100 of 169 total aligned reads displayed.
TGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCT > NC_000913/1040448‑1040646 | atgcagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattg > 2:1014374‑M1/100‑100 (MQ=255) tgcagattgcgggggtaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGc < 1:2143444‑M1/2‑1 (MQ=255) gcagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGcc < 1:3762156‑M1/3‑1 (MQ=255) gcagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGcc < 1:4006112‑M1/3‑1 (MQ=255) gcagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGcc > 1:3197909‑M1/98‑100 (MQ=255) gcagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGcc > 1:2258648‑M1/98‑100 (MQ=255) gTATTTACTTTGCTCCGCCGGCATTTTGTTGATGTGTTCGCTCTCCCCCCTTGTGTGGGTATGGCTGGACCTGCGTCTGAAATGTTAACGAACGTAGAcc < 2:3120501/100‑1 (MQ=255) cagattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCt < 2:3825944‑M1/4‑1 (MQ=255) gattgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGa < 1:2625935‑M1/6‑1 (MQ=255) tgcggggttaacggactcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATgc > 1:4110203‑M1/92‑100 (MQ=255) tgcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATgc > 2:3071575‑M1/92‑100 (MQ=255) gcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgaccttattgattGCCTGATgcg < 2:1644434‑M1/10‑1 (MQ=255) gcggggttaacggaatcagaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATgcg < 1:2917171‑M1/10‑1 (MQ=255) ggTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGgcgc > 1:3389386/1‑100 (MQ=255) ttaacggaatcagaagagataaaaatgggattaaggtcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATgc > 1:751951‑M1/85‑93 (MQ=255) tcgtcgGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCAtt < 1:2336092/100‑1 (MQ=255) tcgtcgGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCAtt < 1:2416890/100‑1 (MQ=255) gCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATC < 2:2280957‑M2/100‑1 (MQ=255) cATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCG < 1:2974469‑M2/100‑1 (MQ=255) aTTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGC < 1:721886‑M2/100‑1 (MQ=255) ttttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCA < 1:366263‑M2/100‑1 (MQ=255) ttttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCA > 1:2496489‑M2/1‑100 (MQ=255) tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCAT > 1:1682992‑M2/1‑100 (MQ=255) tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCAT > 1:210135‑M2/1‑100 (MQ=255) tttGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCAT > 2:3664448‑M2/1‑100 (MQ=255) tctgttgatGTGTTCGCTCTCCTCCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCAT > 1:559031‑M2/3‑100 (MQ=255) gaagagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAgcatcgcatc > 2:3431072‑M1/73‑100 (MQ=255) tgttgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCA < 2:3738226‑M2/100‑1 (MQ=255) gttgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAG > 1:2032104‑M2/1‑100 (MQ=255) agagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAg > 1:644054‑M1/71‑100 (MQ=255) agagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAg > 2:330240‑M1/71‑100 (MQ=255) ttgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGG < 2:2597443‑M2/100‑1 (MQ=255) ttgATGTGTTCGCTCTCCACCCTTGTGTTGGTATGACTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGG > 1:3481659‑M2/1‑100 (MQ=255) gagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCagt > 1:1436793‑M1/70‑99 (MQ=255) gagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAgg > 1:2689180‑M1/70‑100 (MQ=255) gagataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAgg > 1:2528028‑M1/70‑100 (MQ=255) taaTGTGTTCGCTCCCCACCCGTGTCATGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGGACGGAGGCCTGATGCGGCGGATTAGCATCGCATCAGGc > 2:3904550/3‑100 (MQ=255) agataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGc > 2:3762128‑M1/69‑100 (MQ=255) gataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGca > 2:800832‑M1/68‑100 (MQ=255) gataaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGca > 2:3857044‑M1/68‑100 (MQ=255) tgtgTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGCACGTAGGCCTGCTGCGGCGCATTAGCATCGCATCAGGcaat > 2:2968405/1‑100 (MQ=255) taaaaatgggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGcaat > 1:830435‑M1/66‑100 (MQ=255) tgtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatca > 2:4034610/1‑100 (MQ=255) tgtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatca > 2:1994579/1‑100 (MQ=255) gtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatcaa > 1:2184811/1‑100 (MQ=255) tCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaata > 1:826945/1‑100 (MQ=255) gggattaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataat > 2:1299190‑M1/59‑100 (MQ=255) gCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataat > 1:1997298/1‑100 (MQ=255) ctctCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATg > 2:1378945/1‑100 (MQ=255) attaagatcgctttcatcgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATcaataan > 2:4010344‑M1/56‑96 (MQ=255) ccACCCTTGTGTTGGTATGACTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAg > 2:410313/1‑100 (MQ=255) cACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGa < 1:2434743/100‑1 (MQ=255) cccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGata > 1:4130641/1‑100 (MQ=255) ttGTGTTGATATGGCTGGACCCGCGGCTAAAAAGTTAACGAACGTACGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGa < 2:3962496/100‑1 (MQ=255) tgtTGGTATGGCTGAACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGAGGCGGCGCATTAGCATCGCAGCAGGCAATCAATAATGTCAGATATGaaaa > 2:2424168/1‑100 (MQ=255) gtTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAg < 2:3389360/100‑1 (MQ=255) gtTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAg > 1:3146704/1‑100 (MQ=255) gtTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAg > 2:2044516/1‑100 (MQ=255) ttGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGc > 1:1619529/1‑100 (MQ=255) ggTATGGCTGGACCCGCGTCTGAAAAGTTAACGATCGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCgg < 2:2198083/100‑1 (MQ=255) gTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGa < 1:3945274/100‑1 (MQ=255) cgatatgtttccgcttttcatatctgacattattgattGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaa > 1:3723432‑M1/39‑100 (MQ=255) aTGGCTTGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaa < 1:2424183/99‑1 (MQ=255) aTGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaaa < 2:1160239/100‑1 (MQ=255) aTGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGaaa > 1:3890592/1‑100 (MQ=255) ggCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACa < 1:1014112/100‑1 (MQ=255) gCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACat > 1:1758569/1‑100 (MQ=255) tctcccGCGTCTGAAAAGTTAACGAACGTCGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATTAATAATGTCAGATATGAAAAGCGGAAACATATc < 2:2504294/97‑1 (MQ=255) cccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATTGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATGTCGAt > 2:1971460/1‑100 (MQ=255) ccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATg < 1:3010629/100‑1 (MQ=255) tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGa > 1:477467/1‑100 (MQ=255) tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGa > 1:3372334/1‑100 (MQ=255) tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGa > 1:477524/1‑100 (MQ=255) taaaaGTTAACTAACGTATGCCTGATGCTGCGCATTAACATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGa < 1:3545392/89‑1 (MQ=255) aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc < 1:2863834/100‑1 (MQ=255) aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc > 1:2519065/1‑100 (MQ=255) aaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCt < 1:2344974/100‑1 (MQ=255) aGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTa > 2:1762324/1‑100 (MQ=255) gTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa > 2:2356647/1‑100 (MQ=255) gTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa > 1:2116816/1‑100 (MQ=255) gTTAACGAACGTAGGCCTGATGCGGCCCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACAAATCGATGAAAGCGa > 2:1894112/1‑94 (MQ=255) gTTAACGAACGTAGACCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa > 1:1361924/1‑100 (MQ=255) tAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATc > 1:1502834/1‑100 (MQ=255) tAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATc < 2:71969/100‑1 (MQ=255) aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATcc > 1:1287264/1‑100 (MQ=255) aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATcc > 2:12936/1‑100 (MQ=255) acgaacgTAGGCCTGATGCGGCGCATTAGAATCGCATCAGGCAATGTATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATccc < 2:2846149/100‑1 (MQ=255) cgaacgTAGGCTTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCa > 2:2018877/1‑100 (MQ=255) cgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCa > 1:1118919/1‑100 (MQ=255) cgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCa > 2:3463803/1‑100 (MQ=255) cgaacgTAGGCATGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTTAGATATGAAAAGCGGCAACATATAGATGAAAGCGATCTTAAtac > 2:876769/1‑96 (MQ=255) acgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCAttt < 2:747428/100‑1 (MQ=255) cgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATACCGATGAAAGCGATCTTAATCCCAtttt < 2:46867/100‑1 (MQ=255) tAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTa < 2:1755511/100‑1 (MQ=255) tAGGCCTGATGCGGCGCATTAGCATCGAATCAGGCAATCAATAATGTCAGATATGAAAAGAGGAAACATATCGCTGAAAGCGATCTTAATACCATTTTTa > 2:1918480/1‑100 (MQ=255) ggCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtc > 1:3711939/1‑100 (MQ=255) ggCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtc < 1:3253481/100‑1 (MQ=255) ggCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtc < 1:3088917/100‑1 (MQ=255) gCCTGATGCGGCGCATTAGCATCGCATCAGGCctacgttcgttaacttttcagacgcgggtccagccataccaacacaagggtggagagcgaacacatca < 1:2741675‑M2/100‑69 (MQ=255) GCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtct < 2:21325‑M1/100‑1 (MQ=255) | TGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCT > NC_000913/1040448‑1040646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |