New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3220891NA (NA)11 (0.080) 8/154 NT NA noncoding (12/31 nt) REP230 (repetitive extragenic palindromic) element; contains 1 REP sequences REP230 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3220898 NA (NA)noncoding (19/31 nt) REP230 (repetitive extragenic palindromic) element; contains 1 REP sequences REP230 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 194 total aligned reads displayed.

GAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCGCACACA  >  NC_000913/3220799‑3220997
                                                                                                   |                                                                                                   
    aGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgc                                                                                                 >  1:1415559‑M2/1‑96 (MQ=255)
    aGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgc                                                                                                 >  2:1598848‑M2/1‑96 (MQ=255)
     gtgtGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgcc                                                                                                >  1:3406189‑M2/1‑95 (MQ=255)
     gtgtGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgcc                                                                                                <  1:468346‑M2/100‑6 (MQ=255)
      tgtgAAGTGGTGATGAAAGCGGGGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgc                                                                                                 >  2:4047182‑M2/1‑94 (MQ=255)
      tgtgAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcacca                                                                                               <  1:2247252‑M2/100‑7 (MQ=255)
        tgAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgccatc                                                                                             <  2:3747472‑M2/100‑9 (MQ=255)
         gAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgccatcc                                                                                            >  1:715409‑M2/1‑91 (MQ=255)
         gAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgccatcc                                                                                            >  1:2568648‑M2/1‑91 (MQ=255)
         gAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgccatcc                                                                                            <  1:1836859‑M2/100‑10 (MQ=255)
           aCTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGtcgccatccga                                                                                          <  2:316283‑M2/100‑12 (MQ=255)
             tGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATc                                                                                        <  1:816518/100‑1 (MQ=255)
              ggTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATc                                                                                        >  1:3523783/1‑99 (MQ=255)
              ggTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCt                                                                                       >  2:530448/1‑100 (MQ=255)
                 gATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCtttt                                                                                    <  2:1405952/100‑1 (MQ=255)
                 gATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCtttt                                                                                    >  1:2657365/1‑100 (MQ=255)
                 gATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCtttt                                                                                    >  2:716477/1‑100 (MQ=255)
                  aTCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGCCGTCGCCATCCGATCttttt                                                                                   >  2:1046883/1‑100 (MQ=255)
                    cAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTtat                                                                                 <  1:3395554/100‑1 (MQ=255)
                     aaaGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTGAGTGTCGAAGAAGCGTAATGTCAAATCGGATGGCGATACGACGTCGCCAACCGATCtttttc                                                                                  >  1:1673249/1‑97 (MQ=255)
                     aaaGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTtata                                                                                >  1:23707/1‑100 (MQ=255)
                       aGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATacg                                                                              <  1:680264/100‑1 (MQ=255)
                        gcggcgCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGA‑‑CGTCGtatcgccatccgatttgatattacgc                                                                           >  1:2784855‑M2/1‑74 (MQ=255)
                          ggcgCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATacgacg                                                                           <  1:3667454/100‑1 (MQ=255)
                           gcgcGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGAcgc                                                                          <  1:4010916/100‑1 (MQ=255)
                            cgcgTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGAcgcg                                                                         <  1:482942/100‑1 (MQ=255)
                              cgTAAGGCGCTGGGGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCTGTCCGATCTTTTTATACGACGCGTa                                                                       <  2:927046/100‑1 (MQ=255)
                              cgTAAGGCGCTGGCGGCCAGGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTa                                                                       <  2:3648464/100‑1 (MQ=255)
                                tAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGATGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACg                                                                     <  1:2931560/100‑1 (MQ=255)
                                tAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACg                                                                     <  2:2128595/100‑1 (MQ=255)
                                  aGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGcc                                                                   <  2:449171/100‑1 (MQ=255)
                                  aGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGcc                                                                   <  1:885449/100‑1 (MQ=255)
                                  aGGCGCTGGCGGCCATGCGAGTAAGTGGCGAAGAAGCGTAATATCAAATCGGATGGCGCTACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGcc                                                                   <  2:3935505/100‑1 (MQ=255)
                                   ggCGCTGGCGGCCATGCGAGTAAGTGTCGAAGCAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCAGCCGATCTTTTTATACGACGCGTACGccc                                                                  >  1:1433238/1‑100 (MQ=255)
                                   ggCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGccc                                                                  >  2:3247653/1‑100 (MQ=255)
                                   ggCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGccc                                                                  >  1:1060834/1‑100 (MQ=255)
                                   gacgcTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGccc                                                                  >  1:2827211/3‑100 (MQ=255)
                                    gcgcTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCg                                                                 >  1:3614644/1‑100 (MQ=255)
                                     cgcTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGA‑‑CGTCGtatcgccatccgatttgatattacgcttcttcgacactt                                                              >  1:1442159‑M2/1‑61 (MQ=255)
                                      gcTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCa                                                               <  1:199087/100‑1 (MQ=255)
                                        tGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAgg                                                             <  1:308124/100‑1 (MQ=255)
                                        tGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAgg                                                             <  2:587790/100‑1 (MQ=255)
                                        tGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAgg                                                             >  1:4151063/1‑100 (MQ=255)
                                         ggcggcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGc                                                            <  1:2619054/100‑1 (MQ=255)
                                          gcggcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGca                                                           <  2:3702743/100‑1 (MQ=255)
                                          gcggcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGca                                                           <  1:3785572/100‑1 (MQ=255)
                                           cggcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGcat                                                          <  1:3170213/100‑1 (MQ=255)
                                            ngcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGcatc                                                         >  2:1270272/2‑100 (MQ=255)
                                            ggcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGcatc                                                         <  2:3921419/100‑1 (MQ=255)
                                             gcCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGcatca                                                        >  1:3767388/1‑100 (MQ=255)
                                               cATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCatcatc                                                      <  2:3614617/100‑1 (MQ=255)
                                                aTGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATcc                                                     <  1:2998512/100‑1 (MQ=255)
                                                 tGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGTCACGTACGCCCGCAGGCATCATCCg                                                    <  2:2609985/100‑1 (MQ=255)
                                                 tGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCg                                                    <  1:2175914/100‑1 (MQ=255)
                                                 tGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGA‑‑CGTCGtatcgccatccgatttgatattacgcttcttcgacacttactcgcatggcc                                                  <  1:450976‑M2/100‑52 (MQ=255)
                                                   cGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCt                                                  <  1:3024164/100‑1 (MQ=255)
                                                    gAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTc                                                 <  1:3937758/100‑1 (MQ=255)
                                                        aaGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGc                                             >  1:2053186/1‑100 (MQ=255)
                                                         aGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCg                                            <  1:1128857/100‑1 (MQ=255)
                                                          gtgtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGt                                           >  1:328043/1‑100 (MQ=255)
                                                          gtgtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGt                                           <  2:687928/100‑1 (MQ=255)
                                                           tgtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGtt                                          >  1:1504070/1‑100 (MQ=255)
                                                            gtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCTCGCAGGCATCATCCGCTCCGGCGTTa                                         <  2:3770589/100‑1 (MQ=255)
                                                            gtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTa                                         <  2:2417892/100‑1 (MQ=255)
                                                            gtCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTa                                         >  2:2753315/1‑100 (MQ=255)
                                                             tCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTaa                                        <  2:1131553/100‑1 (MQ=255)
                                                              cGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAAc                                       >  2:2096725/1‑100 (MQ=255)
                                                               gaagaaGCGTACTATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTCTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACa                                      <  2:294792/100‑1 (MQ=255)
                                                               gaagaaGCGTAATATCAAATCGGATGGCGATACGACGtcgccatccgatttgatattacgcttcttcgacacttactcgcatggccgccagcgccttccg                                      <  1:964795‑M2/100‑64 (MQ=255)
                                                               gaagaaGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACa                                      <  1:1486286/100‑1 (MQ=255)
                                                                    agCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACg                                 <  2:3567641/100‑1 (MQ=255)
                                                                       gTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCtt                              <  2:1179467/100‑1 (MQ=255)
                                                                         aaTATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTATGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTc                            <  1:2772495/100‑1 (MQ=255)
                                                                          atatCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCa                           <  1:1112809/100‑1 (MQ=255)
                                                                           tatCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCAc                          <  2:2968453/100‑1 (MQ=255)
                                                                           tatCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCAc                          <  1:3592841/100‑1 (MQ=255)
                                                                           tatCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCAc                          <  1:185426/100‑1 (MQ=255)
                                                                           tatCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCAc                          <  2:3489725/100‑1 (MQ=255)
                                                                              cAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCTGCGTTAACAGCACGCTTTCACTg                        >  2:3975318/1‑99 (MQ=255)
                                                                              cAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGc                       <  1:3492693/100‑1 (MQ=255)
                                                                                  tCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTc                   <  2:1116602/100‑1 (MQ=255)
                                                                                   cGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCa                  >  2:3098518/1‑100 (MQ=255)
                                                                                    ggATGGCGATACGACGtcgccatccgatttgatattacgcttcttcgacacttactcgcatggctgccagcgccttacgcgccgctttgatcacgggttc                 <  1:1649577‑M2/100‑85 (MQ=255)
                                                                                    ggATGGCGATACGACGtcgccatccgatttgatattacgcttcttcgacacttactcgcatggccgccagcgccttacgcgccgctttgatcaccagttc                 <  2:1376979‑M2/100‑85 (MQ=255)
                                                                                    ggATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAGCAGCACGCTTTCACTGCCGTCAt                 >  2:3801003/1‑100 (MQ=255)
                                                                                    ggATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCAt                 >  1:4120920/1‑100 (MQ=255)
                                                                                     gATGGCGATACGACGtcgccatccgatttgatattacgcttcttcgacacttactcgcatggccgccagcgccttacgcgccgctttgatcaccagttca                <  2:1739504‑M2/100‑86 (MQ=255)
                                                                                      aTGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCg               <  1:1133059/100‑1 (MQ=255)
                                                                                        ggCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGt             >  1:1209754/1‑100 (MQ=255)
                                                                                         gcgggacgacgTCGCCAGCCGATGGTTTTATACGACGCGTACGCCCGCAGGCTTCATCCGCTCCGGCGTGAACAGCACGCTTTCACTGCCGTCATCGGtt            >  2:189131/6‑100 (MQ=255)
                                                                                           gATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGttt           <  2:818415/99‑1 (MQ=255)
                                                                                           gATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTc          <  1:246420/100‑1 (MQ=255)
                                                                                             tACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCg        <  1:705716/100‑1 (MQ=255)
                                                                                             tACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCg        <  1:2756453/100‑1 (MQ=255)
                                                                                             tACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCg        <  2:1808661/100‑1 (MQ=255)
                                                                                               cgacgTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAATAGCACGCTTTCACTGCCGTCATCGGTTTCCGca      <  2:2506146/100‑1 (MQ=255)
                                                                                               cgacgTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTcc         >  2:2875548/1‑97 (MQ=255)
                                                                                                gacgTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTGAACAGCACGCTTTCACTGCCGTCATCGGTTTCCGcac     <  2:3360252/100‑1 (MQ=255)
                                                                                                  cgTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGACGTCATCGGTTTCCGcacac   <  2:2539332/100‑1 (MQ=255)
                                                                                                   gTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCGcacaca  <  2:2696654/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAATATCAAATCGGATGGCGATACGACGTCGCCATCCGATCTTTTTATACGACGCGTACGCCCGCAGGCATCATCCGCTCCGGCGTTAACAGCACGCTTTCACTGCCGTCATCGGTTTCCGCACACA  >  NC_000913/3220799‑3220997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.