New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 762891NA (NA)7 (0.050) 4/164 NT NA noncoding (130/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 762924 NA (NA)noncoding (163/167 nt) REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences REP68 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 172 total aligned reads displayed.

CTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAC  >  NC_000913/762825‑763023
                                                                                                   |                                                                                                   
cTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGC                                                                                                     <  1:3663082‑M2/100‑1 (MQ=255)
 ttATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGcc                                                                                                    >  2:913986/1‑100 (MQ=255)
 ttATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGcc                                                                                                    <  2:2209481/100‑1 (MQ=255)
     cAGGCCTACGGGACCACCACTGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTa                                                                                                  >  2:2098043/1‑98 (MQ=255)
     cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                                                                <  1:356772/100‑1 (MQ=255)
     cAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACg                                                                                                <  1:1566079/100‑1 (MQ=255)
       ggCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACggg                                                                                              <  1:2349148/100‑1 (MQ=255)
        gCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGt                                                                                             <  2:3698553/100‑1 (MQ=255)
         ccTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTg                                                                                            <  2:3555270/100‑1 (MQ=255)
         ccTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTg                                                                                            >  1:1799055/1‑100 (MQ=255)
           tACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAc                                                                                          >  1:1306142/1‑100 (MQ=255)
            aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                                                         >  1:2954196/1‑100 (MQ=255)
            aCGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGAcc                                                                                         <  2:3403668/100‑1 (MQ=255)
             cGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCg                                                                                        >  1:1425376/1‑100 (MQ=255)
             cGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCg                                                                                        >  1:2636956/1‑100 (MQ=255)
               ggACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGAc                                                                                      <  1:265043/100‑1 (MQ=255)
               ggACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGAc                                                                                      >  1:2367089/1‑100 (MQ=255)
                  ccaccaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAt                                                                                   >  1:1878916/1‑100 (MQ=255)
                    accaATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGGTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGc                                                                                 >  2:597588/1‑100 (MQ=255)
                         tGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGa                                                                            <  2:1750605/100‑1 (MQ=255)
                            aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                                                         >  1:380743/1‑100 (MQ=255)
                            aGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGc                                                                         <  1:3886295/100‑1 (MQ=255)
                             ggccGGATAAGGCCCAAGAGCCGCATCCGAAACGCGATGCCTCATGTGACGTTTAACGTGTCTTCTCAGCCCTCAGGGCGACCGACAATGCCCGAAGGCg                                                                        >  2:3512501/4‑100 (MQ=255)
                                ccgATAATGCGCAAGCGACGCATCGGATTAGCGATGCCTGATGTGACGGTTAACGTGTCGAAGCAGGCCTCCGGGTGACCGACAATGCCCGGAAGc                                                                         <  2:2017864/94‑1 (MQ=255)
                                 ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATAc                                                                    >  2:1871041/1‑100 (MQ=255)
                                 ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATAc                                                                    <  1:2674896/100‑1 (MQ=255)
                                 ggATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATAc                                                                    >  1:3765255/1‑100 (MQ=255)
                                  gATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGagatcggaag                                                                   >  1:1821703/1‑91 (MQ=255)
                                   aTAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGa                                                                  >  1:2199071/1‑100 (MQ=255)
                                      aGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGGGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAat                                                               <  1:1350844/100‑1 (MQ=255)
                                       ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                                                              >  2:166903/1‑100 (MQ=255)
                                       ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                                                              >  2:1588787/1‑100 (MQ=255)
                                       ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                                                              >  1:739620/1‑100 (MQ=255)
                                       ggCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                                                              >  1:1574209/1‑100 (MQ=255)
                                       gacgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAata                                                              >  1:959562/3‑100 (MQ=255)
                                         cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATAtt                                                            >  1:207083/1‑100 (MQ=255)
                                         cgcAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACAGACAATGCCCGGAAGCGATACGAAATAtt                                                            >  1:1046360/1‑100 (MQ=255)
                                           gacgcgcCGCATCCGAAAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGCCCTACAGCTGACCGACAATGCCCGGAAGCGATACGACATAtt                                                            >  2:1959342/4‑98 (MQ=255)
                                            aaGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCgg                                                         >  2:1338619/1‑100 (MQ=255)
                                               cgccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCt                                                      >  1:1695968/1‑100 (MQ=255)
                                                gccgcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTa                                                     <  2:218945/100‑1 (MQ=255)
                                                   gcATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACgg                                                  <  2:1000018/100‑1 (MQ=255)
                                                    cATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACgg                                                  >  2:2405487/1‑99 (MQ=255)
                                                      tCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTCCGGtt                                                >  2:2598089/1‑99 (MQ=255)
                                                      tCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGttt                                               <  2:3033419/100‑1 (MQ=255)
                                                         gACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaa                                            >  2:588137/1‑100 (MQ=255)
                                                         gACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaa                                            <  1:3468212/100‑1 (MQ=255)
                                                          aCAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtagg                                           <  1:658409‑M2/100‑59 (MQ=255)
                                                          aCAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTaaaa                                           <  1:2651958/100‑1 (MQ=255)
                                                           cAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGCCAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAg                                          <  1:2404430/100‑1 (MQ=255)
                                                             aGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGAt                                        <  1:855544/100‑1 (MQ=255)
                                                               cGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctga                                      <  1:1556454‑M2/100‑64 (MQ=255)
                                                                gATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgat                                     <  2:125882‑M2/100‑65 (MQ=255)
                                                                gATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc                                     <  1:102699/100‑1 (MQ=255)
                                                                  tGCCTGATGTGACGTTTAACGTGTCTTAGCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAAc                                     <  2:1400079/98‑1 (MQ=255)
                                                                    ccTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGAtt                                 <  2:2605163/100‑1 (MQ=255)
                                                                        aTGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTg                             <  2:3583147/100‑1 (MQ=255)
                                                                         tgtgACGTTTAACGTGTCGTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTg                             <  2:3107802/99‑1 (MQ=255)
                                                                          ntgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGaa                           >  2:417549/2‑100 (MQ=255)
                                                                           tgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAg                          >  2:850467/1‑100 (MQ=255)
                                                                           tgACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAg                          >  1:256878/1‑100 (MQ=255)
                                                                            gACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAgg                         >  1:138542/1‑100 (MQ=255)
                                                                            gACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAgg                         >  2:2967994/1‑100 (MQ=255)
                                                                             aCGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAAGGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGa                        <  2:3765227/100‑1 (MQ=255)
                                                                              cggttAACGCGTCATACCTGGCCTGCGGGTGACGGACAATGCCCGCAAGCGATACGAAATATTCGGTCTACGGTCTGAAAGCTCTCGCTTACTgcccga                        >  2:766587/4‑94 (MQ=255)
                                                                              cGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGAt                       >  1:1309579/1‑100 (MQ=255)
                                                                              cGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGAt                       <  1:450951/100‑1 (MQ=255)
                                                                              cGTTTAACGTGTCATAACATGCCTACGCGTGACGGACAATGTCCGGAAGCGATACGAAAGAGTCGGTCTACGGGTTAAAAGATAGCGAGTACTGAAGGa                        >  2:128179/1‑99 (MQ=255)
                                                                                tttAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATgg                     <  2:1833727/100‑1 (MQ=255)
                                                                                tttAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATgg                     <  1:4130630/100‑1 (MQ=255)
                                                                                tttAACGTGTATTATCAGGTCTACGGGTGATCGACAATGCCAGGAATCTATACGAAATATTCGGTCTATGGTTTAAAAGATAACGATTACTGAAGGATgg                     <  2:1432039/100‑1 (MQ=255)
                                                                                   aaCGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACa                  >  1:553960/1‑100 (MQ=255)
                                                                                     cGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGa                <  2:1380786/100‑1 (MQ=255)
                                                                                       tgtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAac              <  1:2356915/100‑1 (MQ=255)
                                                                                       tgtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAac              <  2:2013106/100‑1 (MQ=255)
                                                                                       tgtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAac              <  2:3418261/100‑1 (MQ=255)
                                                                                        ntCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAaca             >  1:2025753/2‑100 (MQ=255)
                                                                                        gtCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAaca             <  2:2287761/100‑1 (MQ=255)
                                                                                          cTTATCAGGCCTACGGGTGACCGACAATGCCCTGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGATAGAAcaca           <  2:3013589/100‑1 (MQ=255)
                                                                                          cTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATAATCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAAcaca           <  1:3070116/100‑1 (MQ=255)
                                                                                            tATCAGGCCTACGGGTGACCGATAAGGCCAGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAac              <  2:2051077/95‑1 (MQ=255)
                                                                                            tATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATg         <  1:1718196/100‑1 (MQ=255)
                                                                                             aTCAGGCatcgcttgtcggatgcggcgcttgcgccttatcggacctaccggggggggcccgtaggcctgataagacgcgtcagcgtcgcatcaggct           <  2:415344‑M2/97‑91 (MQ=255)
                                                                                             aTCAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttca        <  1:3571811‑M2/100‑94 (MQ=255)
                                                                                             aTCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGa        >  2:3788001/1‑100 (MQ=255)
                                                                                              tCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGaa       <  2:1209910/100‑1 (MQ=255)
                                                                                               cAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat      >  1:2554156‑M2/1‑5 (MQ=255)
                                                                                               cAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat      <  2:104271‑M2/100‑96 (MQ=255)
                                                                                               cAGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaat      >  2:550646‑M2/1‑5 (MQ=255)
                                                                                               cAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAAc      >  1:2602266/1‑100 (MQ=255)
                                                                                                aGGCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt     >  1:2967169‑M2/1‑4 (MQ=255)
                                                                                                aGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATg         <  2:330155/96‑1 (MQ=255)
                                                                                                aGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACt     <  1:3694807/100‑1 (MQ=255)
                                                                                                 ggCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattg    <  2:2818738‑M2/100‑98 (MQ=255)
                                                                                                 ggCatcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcggcgcatcgggcttca        >  2:1718186‑M2/1‑3 (MQ=255)
                                                                                                 ggCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACtt    >  1:4155869/1‑100 (MQ=255)
                                                                                                  gCctcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattg    >  2:679579‑M2/1‑2 (MQ=255)
                                                                                                   ccTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAc  >  1:1032673/1‑100 (MQ=255)
                                                                                                   catcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattgcc  >  1:1414487‑M2/1‑1 (MQ=255)
                                                                                                   catcgcttgtcggatgcggcgcttgcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgtcagcgtcgcatcaggcttcaattgcc  >  1:707914‑M2/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTTATCAGGCCTACGGGACCACCAATGTAGGTCGGATAAGGCGCAAGCGCCGCATCCGACAAGCGATGCCTGATGTGACGTTTAACGTGTCTTATCAGGCCTACGGGTGACCGACAATGCCCGGAAGCGATACGAAATATTCGGTCTACGGTTTAAAAGATAACGATTACTGAAGGATGGACAGAACACATGAACTTAC  >  NC_000913/762825‑763023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.