New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2133431NA (NA)13 (0.090) 8/164 NT NA intergenic (‑34/+59) wcaA/wzc putative glycosyl transferase/colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase
?NC_000913 = 2133461 NA (NA)noncoding (30/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 239 total aligned reads displayed.

CCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAT  >  NC_000913/2133332‑2133530
                                                                                                   |                                                                                                   
ccgaagcttcAGCTGTTGGGGGGTCCAGGCCGGCATATGGAATGAGAGCAGAGCATCATTTTTAATGGGTTGTTCTCCCGGATTATGAGCTGGTttgctt                                                                                                     >  1:2104375/10‑100 (MQ=255)
   aaTCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgcc                                                                                                  >  2:2524314‑M1/1‑97 (MQ=255)
    aTCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccg                                                                                                 <  2:3772971‑M1/100‑5 (MQ=255)
     tCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccgg                                                                                                >  2:3728179‑M1/1‑95 (MQ=255)
     tCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccgg                                                                                                <  1:1980787‑M1/100‑6 (MQ=255)
      cGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccgga                                                                                               >  1:2764455‑M1/1‑94 (MQ=255)
      cGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccgga                                                                                               >  1:255096‑M1/1‑94 (MQ=255)
       gccaacaactggcggttccaGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggat                                                                                              >  2:2708529‑M1/10‑93 (MQ=255)
       gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggat                                                                                              >  2:943457‑M1/1‑93 (MQ=255)
       gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggat                                                                                              >  2:319274‑M1/1‑93 (MQ=255)
        ccAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATg                                                                                             <  2:271767/100‑1 (MQ=255)
         cAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgc                                                                                            >  1:2533829/1‑100 (MQ=255)
             tgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggcg                                                                                        <  2:552758/100‑1 (MQ=255)
             tgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggcg                                                                                        <  2:437333/100‑1 (MQ=255)
              gttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGt                                                                                       >  2:1144980/1‑100 (MQ=255)
              gttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTATTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcgg                                                                                          >  1:2373407/1‑97 (MQ=255)
               ttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTg                                                                                      <  1:1807495/100‑1 (MQ=255)
                tgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGa                                                                                     >  1:1763282/1‑100 (MQ=255)
                 ggCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGGTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttca                                                                                    <  2:254941‑M1/100‑18 (MQ=255)
                  gCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTCTGAGCTGGTTTGCTTGGCGGATGCGGCGTGAAc                                                                                   >  1:2095599/1‑100 (MQ=255)
                  gCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAAc                                                                                   <  2:2111232/100‑1 (MQ=255)
                     gTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATTAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGcc                                                                                >  1:2501033/1‑100 (MQ=255)
                      ttCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCt                                                                               <  1:3595870/100‑1 (MQ=255)
                         cAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCtt                                                                              <  2:3972975/98‑1 (MQ=255)
                         cAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTAT                                                                            <  2:1979041‑M2/100‑1 (MQ=255)
                           ngtCGGCATATAGATGTAGAGCAGCTGATTGTTTTTCATAGGTTGTTTTCCCGGCTTATGATCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATC                                                                           <  1:627707‑M2/98‑1 (MQ=255)
                           ggTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATC                                                                           <  2:3614824‑M2/99‑1 (MQ=255)
                              cGGTATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGC                                                                       >  1:490‑M2/1‑100 (MQ=255)
                              cGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttcacgccgcatccggc                                                                       <  2:3906380‑M1/100‑31 (MQ=255)
                              cGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                       >  2:3555342‑M2/1‑100 (MQ=255)
                              cGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                       >  2:3868581‑M2/1‑100 (MQ=255)
                               ggCATATAGATTGAGTTCAGCGGATTGTTGTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttcacgccgcatccggca                                                                      <  1:1125164‑M1/100‑32 (MQ=255)
                               ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttcacgccgcatccggca                                                                      <  1:1125165‑M1/100‑32 (MQ=255)
                               ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                      <  2:2919091/100‑1 (MQ=255)
                               ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                       <  1:3872540‑M2/99‑1 (MQ=255)
                               ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGC                                                                       <  2:2213397‑M2/99‑1 (MQ=255)
                                ggctatagatTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGCaa                                                                     >  2:526970‑M2/4‑98 (MQ=255)
                                gcctataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     >  1:697937/4‑100 (MQ=255)
                                 cATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttcacgccgcatccggcaag                                                                    <  2:2133056‑M1/100‑34 (MQ=255)
                                 cATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGCaag                                                                    >  2:2743006‑M2/1‑97 (MQ=255)
                                  atatAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTgccggataaggcgttcacgccgcatccggcaagc                                                                   <  2:1978798‑M1/100‑35 (MQ=255)
                                  atatAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGCaagc                                                                   >  1:2969697‑M2/1‑96 (MQ=255)
                                   tataGATTGAGATCAGCGGATTGGGTTTCATAGGTTGTTCTCCCGGCGTATGAGTTGGTTTGTTTTCCGGATGCGGCGTGAACGCTTTATTTGGCCt                                                                     >  1:847025/1‑97 (MQ=37)
                                    ataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTCCg                                                                  >  1:4188336/1‑99 (MQ=255)
                                     taGATTGATATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                   <  1:3807780/97‑1 (MQ=255)
                                      aGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgggg                                                               >  2:1495073/1‑100 (MQ=255)
                                        aTTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCg                                                             >  2:2036061/1‑100 (MQ=255)
                                        aTTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCg                                                             >  1:217725/1‑100 (MQ=255)
                                             gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCg                                                        <  1:1195706/100‑1 (MQ=255)
                                               tCAGCGGATTGTTTTTCATAGGTTGCTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGaa                                                      <  1:4198/100‑1 (MQ=255)
                                                 aGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATg                                                    >  2:1436424/1‑100 (MQ=255)
                                                  gCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGc                                                   <  2:3010333/100‑1 (MQ=255)
                                                    ggATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGCTGCGGCGTGAACGCCTTATCCGGCCTACGGGTCGGTGCGAATGCa                                                  >  1:559216/1‑99 (MQ=255)
                                                     gATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAgg                                                <  2:708647/100‑1 (MQ=255)
                                                       ttGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcg                                              <  1:4063811/100‑1 (MQ=255)
                                                         gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtc                                            >  1:3920392/1‑100 (MQ=255)
                                                          tttttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTCCGGGGCGGTGCGAATGCAGGcgtcg                                           >  1:1637294/1‑100 (MQ=255)
                                                           ttttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGCaagcaaaccagctcataagccgggagaac                                          <  1:563205‑M2/100‑30 (MQ=255)
                                                             ttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTa                                        <  2:2283117/100‑1 (MQ=255)
                                                                  aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGGCGGATGCTGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCTAATGCATGCGTCGTTATTTCg                                   <  1:1244553/100‑1 (MQ=38)
                                                                  aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                   <  2:1120794/100‑1 (MQ=255)
                                                                  aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                   <  2:1943865/100‑1 (MQ=255)
                                                                  aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                   <  1:1536456/100‑1 (MQ=255)
                                                                   ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                  >  2:3387602/1‑100 (MQ=255)
                                                                   ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                  >  2:464226/1‑100 (MQ=255)
                                                                   ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                  >  1:3084620/1‑100 (MQ=255)
                                                                    tccgatctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                 <  2:308275/95‑1 (MQ=255)
                                                                     ttgttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCAt                                >  2:1871079/1‑100 (MQ=255)
                                                                     ccgatctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                 <  2:307995/95‑1 (MQ=255)
                                                                      tgttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATc                               <  2:289632/100‑1 (MQ=255)
                                                                       gttCTCCCGTCTTATGAGCTGGATTGCTTGCCGGATGCCGCGTGAACGCCTTATCCGGCCTACAGGGCGGTCCGAAGGCAGGCGTCGTTAattgcaaccc                              >  1:3025009/1‑93 (MQ=25)
                                                                        ttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCg                             <  2:1671357/100‑1 (MQ=255)
                                                                          ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                           <  1:3659898/100‑1 (MQ=255)
                                                                          ctcCCGGCTTATGAGCAGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATGTAGCATc                               >  1:3398186/1‑96 (MQ=255)
                                                                            cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCGCGCCTACGGGGCGGTGCGAACGCAGGCGGCGGTCTTTCGCCTCCGACt                          >  1:4002141/1‑99 (MQ=37)
                                                                            cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACtt                         >  2:1601796/1‑100 (MQ=255)
                                                                             ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                        <  1:319272/100‑1 (MQ=255)
                                                                             ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                        >  2:1186129/1‑100 (MQ=255)
                                                                              ctgCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtat                       >  2:2900554/3‑100 (MQ=255)
                                                                              cGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtat                       <  1:2719480/100‑1 (MQ=255)
                                                                                    aTGAGCTGGTTTGCTTGCCGGATGCGTCTTGAACGCCTTATCCTGACGACGTGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgt                 <  1:2692619/100‑1 (MQ=255)
                                                                                      gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat               >  1:876841/1‑100 (MQ=255)
                                                                                       aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt              <  1:3556373/100‑1 (MQ=255)
                                                                                        gCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattc             >  1:1878104/1‑100 (MQ=255)
                                                                                           ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGGGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta          >  1:467530/1‑100 (MQ=255)
                                                                                           ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattcg            >  1:1388829/1‑98 (MQ=255)
                                                                                           ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta          >  2:2374360/1‑100 (MQ=255)
                                                                                           ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGAGTCGTTATTTCGCATCCGACTTATattcgtattcgt           >  2:263817/1‑99 (MQ=255)
                                                                                             tttGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAAt        <  1:3081679/100‑1 (MQ=255)
                                                                                              ttgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATa       >  1:3350450/1‑100 (MQ=255)
                                                                                               tgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCaagcaaaccagctcataagccgggagaacaacctatgaaaaacaatccgctgatctcaatctata      <  2:3434707‑M2/100‑66 (MQ=255)
                                                                                               tacttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAg      <  1:9730/98‑1 (MQ=255)
                                                                                                gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc     <  2:4236268/100‑1 (MQ=255)
                                                                                                gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGAAGGCGTCGTTATTTCGCATCCGACTTATATTCTTATTCGTAATAGc     >  1:1703210/1‑100 (MQ=255)
                                                                                                 nttgccggatgcggcgtgaacgccttatccggcaagcaaaccagctcataagccgggagaacaacctatgaaaaacaatccgctgatctcaatctatat     >  1:80058‑M1/2‑3 (MQ=255)
                                                                                                  ttgcCGGATGCGGCGTGAACGCCTTATCCGGCaagcaaaccagctcataagccgggagaacaacctatgaaaaacaatccgctgatctcaatctatatgc   <  2:764699‑M2/100‑69 (MQ=255)
                                                                                                  ttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCa   <  2:180654/100‑1 (MQ=255)
                                                                                                   tgcCGGATGCGGCGTGAACGCCTTATCCGGCaagcaaaccagctcataagccgggagaacaacctatgaaaaacaatccgctgatctcaatctatatgcc  <  1:2017338‑M2/100‑70 (MQ=255)
                                                                                                   tgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAt  >  1:3268479/1‑100 (MQ=255)
                                                                                                   tgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAt  >  1:1135899/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CCGAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAT  >  NC_000913/2133332‑2133530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.