BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3555795 =	NA (NA)	10 (0.070)	7/162	NT	NA	intergenic (+5/+38)	malT/rtcA	mal regulon transcriptional activator/RNA 3'‑terminal phosphate cyclase
*	?	NC_000913	3555821 =	NA (NA)	10 (0.070)	7/162	NT	NA	intergenic (+31/+12)	malT/rtcA	mal regulon transcriptional activator/RNA 3'‑terminal phosphate cyclase

Only 100 of 193 total aligned reads displayed.

TCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGA  >  NC_000913/3555696‑3555894

 ccGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTa                                                                                                     >  2:1467635/1‑99 (MQ=255)

  cGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTCGc                                                                                                   >  1:3354512/1‑100 (MQ=255)

  cGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGc                                                                                                   <  1:2231563/100‑1 (MQ=255)

  cGCAATCTGTATCAGAAACTCGGCGTGGCCAATCGCCAGGATGCGGAACAACACGCCCAGCAATTGCTGAAGATGATGCGGTACGGCGTGTAAGTTTAGc                                                                                                   <  1:2668463/100‑1 (MQ=255)

    gaaTCTGTATCGGAGACTCGGCGGGGCCCAGCGTCAGCATGCGGTACAACACGCCCAGCAATTGCTGAATAGGATGGGGTACGGCGTGTAAGTGTAGCCg                                                                                                 >  1:1262682/2‑100 (MQ=255)

    cAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCg                                                                                                 <  1:4125400/100‑1 (MQ=255)

    cAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCg                                                                                                 >  1:695166/1‑100 (MQ=255)

    agatcgcggtggtggagcgtttcttgccggtgcggtttagtttgatagaaacagatggcgtaacgcgggtgagcattgaatgatgcagagatgtaAg                                                                                                    >  1:1526061‑M1/96‑97 (MQ=255)

         tGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATaa                                                                                            <  2:747003/100‑1 (MQ=255)

          ttATCAGAAACTCGGCGAGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAc                                                                                           >  1:4225144/2‑100 (MQ=255)

          gTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAc                                                                                           <  1:3772355/100‑1 (MQ=255)

           tATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcg                                                                                          <  2:2722704/100‑1 (MQ=255)

            aTCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgc                                                                                         >  2:3121494/1‑100 (MQ=255)

            aTCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgc                                                                                         <  2:1564319/100‑1 (MQ=255)

            aTCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgc                                                                                         >  1:2198638/1‑100 (MQ=255)

             tCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgcg                                                                                        >  2:1088275/1‑100 (MQ=255)

             tCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAAcgcg                                                                                        >  1:2074713/1‑100 (MQ=255)

              cAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACgcgc                                                                                       >  1:1644180/1‑100 (MQ=255)

               ataaaCTCGGCGTTGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGcc                                                                                      >  2:2901005/3‑100 (MQ=255)

               aGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGcc                                                                                      <  2:331535/100‑1 (MQ=255)

                gAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCa                                                                                     <  2:1865806/100‑1 (MQ=255)

                 aaaCTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAg                                                                                    >  1:101108/1‑100 (MQ=255)

                 aaaCTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAg                                                                                    <  2:2073683/100‑1 (MQ=255)

                    cTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATc                                                                                 >  2:3031515/1‑100 (MQ=255)

                      cGGCGTGTCCCATCGCCAGGATGCGGTACAACACTCCCAGCAATTTCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCg                                                                               <  1:3060787/100‑1 (MQ=255)

                       ggCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGCGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCgg                                                                              <  1:3833770/100‑1 (MQ=255)

                        ttcttgccggtgcggtttagtttgatagaaacagatggcgtaacgcgggtgagcattgaatgatgcagagatgtaAGCCGGATAACGCGCCAGATCCGGc                                                                             >  1:1388084‑M1/76‑100 (MQ=255)

                        gCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGc                                                                             <  2:1791825/100‑1 (MQ=255)

                         tctagccggtgcggtttagtttgagagaaacagatggcgtaacgcgggtgagcattgaaggatgcaaagataccAGCCGGATAACGCGCCAGATCCGGCt                                                                            >  1:273657‑M1/75‑100 (MQ=255)

                          gTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCtt                                                                           >  2:277982/1‑100 (MQ=255)

                          gTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCt                                                                            <  1:854126/99‑1 (MQ=255)

                          cttgccggtgcggtttagtttgatagaaacagatggcgtaacgcgggtgagcattgaatgatgcagagatgtaAGCCGGATAACGCGCCAGATCCGGCtt                                                                           >  2:1616502‑M1/74‑100 (MQ=255)

                            ggCCCCTCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAATATGTTGGGGTACGGCGTGTAAGTGTAGCCGGATAACGCGCCAGATCCGGCtt                                                                           <  1:1896121/98‑1 (MQ=255)

                            ggCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATCACACGCCAGATCCGGCTTAc                                                                         >  1:3377676/1‑100 (MQ=255)

                            ggCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTAc                                                                         >  2:2318127/1‑100 (MQ=255)

                            ggCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTAc                                                                         <  1:2211683/100‑1 (MQ=255)

                            ggCCCATCGCCAGGATGCGGTACAACACGCCCAGCAAAGGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCAGGATAACGCGCCAGATCCGGCTTAc                                                                         >  1:3551/1‑100 (MQ=255)

                             gccggtgcggtttagtttgatagaaacagatggcgtaacgcgggtgagcattgaatgatgcagagatgtaTGCCGGATAACGCGCCAGATCCGGCTTACa                                                                        >  2:1976157‑M1/71‑100 (MQ=255)

                               cggggcggtttagtttgatagaaacagatggcgtaacgcgggtgagcagtgaatgatgcagggatgtaAGCCGGATAACGCGCCAGTTCCGGCTTACAtc                                                                      >  1:3592891‑M1/69‑100 (MQ=255)

                               ccATGGCGAGGATGCGGTACAACACGCCCAGCAATTGCTGGAGATGCTGGGGGACGTCGTGTGAGTTTAGCGGGATAACGCGCCAGGTCCg                                                                               >  1:3626584/1‑91 (MQ=255)

                                 aTCGCCAGGATGCGGTAAAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCAGGATAAAGCGCCAGATCCGGCTGACAtctc                                                                    >  1:1145269/1‑100 (MQ=255)

                                   cGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTg                                                                  <  2:2108946/100‑1 (MQ=255)

                                    gCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTg                                                                  <  1:367413/99‑1 (MQ=255)

                                    gCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGc                                                                 >  2:1528604/1‑100 (MQ=255)

                                    gCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGc                                                                 >  1:227707/1‑100 (MQ=255)

                                     ccAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGca                                                                >  1:3113409/1‑100 (MQ=255)

                                      gtttagtttgatagaaacagatggcgtaacgcgggtgagcattgaatgatgcagagatgtaAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGcat                                                               >  2:1104769‑M1/62‑100 (MQ=255)

                                       aGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGcatc                                                              <  2:2569237/100‑1 (MQ=255)

                                          aTGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCAtt                                                           <  1:1528600/100‑1 (MQ=255)

                                           tGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTc                                                          <  1:2508781/100‑1 (MQ=255)

                                           tGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTc                                                          <  2:2432269/100‑1 (MQ=255)

                                           tGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTc                                                          <  1:1694030/100‑1 (MQ=255)

                                             cGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTc                                                          >  1:49570/1‑98 (MQ=255)

                                               gTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATg                                                      <  2:1014678/100‑1 (MQ=255)

                                                tACAACACGCCCAGCAATTGCTGAATATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGc                                                     <  2:3007836/100‑1 (MQ=255)

                                                 acaacaCGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCt                                                    >  2:125961/1‑100 (MQ=255)

                                                  taacaCGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTc                                                   <  1:2121264/99‑1 (MQ=255)

                                                   aacaCGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCa                                                  >  1:640270/1‑100 (MQ=255)

                                                        gCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCcgc                                             <  1:1325028/100‑1 (MQ=255)

                                                           cAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGtt                                          >  2:552357/1‑100 (MQ=255)

                                                            aGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTa                                         <  2:1373611/100‑1 (MQ=255)

                                                             gCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTAc                                        >  1:2018238/1‑100 (MQ=255)

                                                              cAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACg                                       <  1:3099316/100‑1 (MQ=255)

                                                               naTTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGc                                      >  2:871819/2‑100 (MQ=255)

                                                               aaTTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGc                                      <  2:2263804/100‑1 (MQ=255)

                                                                aTTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGcc                                     <  1:1669739/100‑1 (MQ=255)

                                                                 ttGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCa                                    <  1:1024996/100‑1 (MQ=255)

                                                                 ttGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCa                                    <  2:3796609/100‑1 (MQ=255)

                                                                 ttGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCa                                    <  2:704458/100‑1 (MQ=255)

                                                                   gCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATc                                  >  1:3299395/1‑100 (MQ=255)

                                                                    cTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCt                                 >  2:2963468/1‑100 (MQ=255)

                                                                       aaGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGtt                              <  2:1885600/100‑1 (MQ=255)

                                                                         gatgatGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGtttn                            <  1:3720865/100‑2 (MQ=255)

                                                                         gatgatGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTc                            <  1:972906/100‑1 (MQ=255)

                                                                         gatgatGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTc                            <  1:3327633/100‑1 (MQ=255)

                                                                         gatgatGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTc                            <  2:640272/100‑1 (MQ=255)

                                                                          atgatgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCt                           >  2:2415051/1‑100 (MQ=255)

                                                                          atgatgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCt                           <  2:1221036/100‑1 (MQ=255)

                                                                           tgatgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCATATCCCGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTa                          <  1:4021797/100‑1 (MQ=255)

                                                                           tgatgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTa                          <  2:4150880/100‑1 (MQ=255)

                                                                           tgatgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTa                          <  1:182133/100‑1 (MQ=255)

                                                                             atgGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATc                        >  2:2545491/1‑100 (MQ=255)

                                                                               ggggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGCTCCGGCTTCCATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCCGTctctcccca                      >  1:1078857/1‑95 (MQ=255)

                                                                               ggggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATAATTCAATGCTAACCCGCGTTAAGCCATCTGTTTCTATCaa                      >  2:871120/1‑100 (MQ=255)

                                                                                gggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCaaa                     >  1:3484941/1‑100 (MQ=255)

                                                                                 ggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAAc                    >  1:952165/1‑100 (MQ=255)

                                                                                 ggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAAc                    <  2:3065299/100‑1 (MQ=255)

                                                                                 ggTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAAc                    <  2:3966370/100‑1 (MQ=255)

                                                                                   tACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTa                  <  1:1498216/100‑1 (MQ=255)

                                                                                   tACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCACACCCGCGTTACGCCATCTGTTTCTATCAAACTa                  <  1:2671117/100‑1 (MQ=255)

                                                                                    aCGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACt                   >  1:2194040/1‑98 (MQ=255)

                                                                                          tgtAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACAGCa           >  1:1278191/1‑100 (MQ=255)

                                                                                           gtAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCACTCCTCACCCGCTTTACGCTCTCTGTTTCTATCAAACTCAACCGCAc          >  1:1761591/1‑100 (MQ=255)

                                                                                           gtAAGTTTAGACGGATAACGCGAGAGATCCGACTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCCCACTAACCCg             >  1:2392794/1‑97 (MQ=255)

                                                                                            tAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCATCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCAcc         >  2:3224077/1‑100 (MQ=255)

                                                                                              aGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCgg       <  1:3011458/100‑1 (MQ=255)

                                                                                               tgtaAGCCGGATCTGGCGCGTTATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGc      <  1:32363‑M1/96‑1 (MQ=255)

                                                                                               gTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGc      >  1:14181/1‑100 (MQ=255)

                                                                                                tttAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTCACGCCATCTGTTTCGATCAAACTAAACCGCACCGGc      >  1:2883909/1‑99 (MQ=255)

                                                                                                   AGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGa  <  2:1472479‑M1/100‑1 (MQ=255)

TCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAAGTTTAGCCGGATAACGCGCCAGATCCGGCTTACATCTCTGCATCATTCAATGCTCACCCGCGTTACGCCATCTGTTTCTATCAAACTAAACCGCACCGGCAAGA  >  NC_000913/3555696‑3555894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.