New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627892126 (0.820)9 (0.060) 7/164 NT 6.9% coding (578/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627903 128 (0.900)coding (589/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 236 total aligned reads displayed.

GCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGT  >  NC_000913/4627793‑4627991
                                                                                                   |                                                                                                   
gCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGA                                                                                                     >  1:3552956‑M1/1‑100 (MQ=255)
gCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGA                                                                                                     >  2:1844053‑M1/1‑100 (MQ=255)
gCATCAAAAAGTTTATGGCTGAAAAAGGGACCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGA                                                                                                     <  1:2160458‑M1/100‑1 (MQ=255)
   tCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGAc                                                                                                  <  2:2408912/100‑1 (MQ=255)
    cAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACg                                                                                                 >  1:2432143/1‑100 (MQ=255)
     aaaacGTTTATGGCCGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCCCAGTATATGGCACATCTGGGGATCGAGAc                                                                                                  >  1:2968056/1‑98 (MQ=255)
     aaaaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGTTCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACgg                                                                                                <  2:1791800/100‑1 (MQ=255)
     aaaaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACCTCTGGCGATCGAGACg                                                                                                 >  2:1625025/1‑99 (MQ=255)
     aaaaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACgg                                                                                                <  2:3439113/100‑1 (MQ=255)
       aaaGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTg                                                                                              <  1:1376653/100‑1 (MQ=255)
          gTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTg                                                                                           >  2:844937/1‑100 (MQ=255)
            ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                         <  1:521676‑M2/100‑2 (MQ=255)
             tATGGCTGAAAAAGGGATCCAGCCGGATCTGTTCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                        >  2:3493005‑M2/1‑98 (MQ=255)
             tATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                        >  1:857357‑M2/1‑98 (MQ=255)
             tATGGCTGAAAAAGGGATCCAGCCGAATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                        >  1:385313‑M2/1‑98 (MQ=255)
               tGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                      <  1:181770‑M2/100‑5 (MQ=255)
                ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGGAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     <  2:3521801‑M2/100‑6 (MQ=255)
                ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                     <  2:677554‑M2/100‑6 (MQ=255)
                 gCTGAAAAGGGGATCCAGCCGGACCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                    <  2:3447392‑M2/100‑7 (MQ=255)
                 gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                    <  2:2020549‑M2/100‑7 (MQ=255)
                 gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                    <  1:2724342‑M2/100‑7 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATTGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                   <  2:2004071‑M2/100‑8 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatcc                                                                                   <  1:3224221‑M1/100‑19 (MQ=255)
                  cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                   >  1:3776002‑M2/1‑93 (MQ=255)
                   tGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccc                                                                                  <  1:366501‑M1/100‑20 (MQ=255)
                   tGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccc                                                                                  <  2:3649860‑M1/100‑20 (MQ=255)
                   tGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCg                                                                                  <  2:40639/100‑1 (MQ=255)
                     aaaaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatcccca                                                                                <  1:1764837‑M1/100‑22 (MQ=255)
                      aaaaGGGATCGAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccag                                                                               <  1:967239‑M1/100‑23 (MQ=255)
                      aaaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccag                                                                               <  2:769641‑M1/100‑23 (MQ=255)
                      aaaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGaaa                                                                               <  1:2842567/100‑1 (MQ=255)
                       aaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAAc                                                                              <  2:3793220/100‑1 (MQ=255)
                        aaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccagat                                                                             <  2:1251503‑M1/100‑25 (MQ=255)
                        aaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACg                                                                             <  1:1424073/100‑1 (MQ=255)
                         aGGGATCCAGCCGGATCTGTTCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGt                                                                            <  2:1734710/100‑1 (MQ=255)
                               ccAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCttt                                                                      <  2:3153431/100‑1 (MQ=255)
                                 aGCCGAATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTa                                                                     <  1:3474488/99‑1 (MQ=255)
                                  gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGAGGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                   >  1:2064992/1‑100 (MQ=255)
                                    cGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAg                                                                 >  2:3107422/1‑100 (MQ=255)
                                      gatctgttctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTa                                                               <  2:1684715/100‑1 (MQ=255)
                                       atctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTAt                                                              <  1:1555245/100‑1 (MQ=255)
                                        tctgttctTCCCCTCGGAAGAAGCCGGTGCTCCACAGTATATGGAACATCTGGGGATCGAccagcaccgtctcgatccccagatgttccatatactgtgg                                                             <  1:1543333‑M1/100‑41 (MQ=255)
                                           gatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGc                                                          >  2:1928421/1‑100 (MQ=255)
                                               tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGACCATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCACCGGTg                                                      >  1:773363/1‑100 (MQ=255)
                                               tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTg                                                      >  2:657577/1‑100 (MQ=255)
                                                   ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                  >  2:4166730/1‑100 (MQ=255)
                                                    cTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAg                                                 >  1:3436939/1‑100 (MQ=255)
                                                       ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                              <  1:3682490/100‑1 (MQ=255)
                                                       ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                              <  2:4202976/100‑1 (MQ=255)
                                                       ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                              <  2:1428482/100‑1 (MQ=255)
                                                           gaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgcg                                          <  2:462962/100‑1 (MQ=255)
                                                             agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                        >  1:1116812/1‑100 (MQ=255)
                                                             agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                        >  2:385770/1‑100 (MQ=255)
                                                             agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                        <  1:1679870/100‑1 (MQ=255)
                                                               ccGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaaaa                                      >  2:1869781/1‑100 (MQ=255)
                                                                cGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAc                                     >  1:493989/1‑100 (MQ=255)
                                                                 gATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                    >  1:1482838/1‑100 (MQ=255)
                                                                   tGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCg                                  >  2:2716934/1‑100 (MQ=255)
                                                                    gcgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAccc                                   <  1:2559994/98‑1 (MQ=255)
                                                                    gcgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGt                                 <  1:1011752/100‑1 (MQ=255)
                                                                      cgatctgTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTc                               <  1:3278987/94‑1 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              <  2:1268920/100‑1 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              >  2:2131316/1‑100 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTGTATGAGAAACAGCGGTGCGCAGATCCGCGAAAACCAGTTcc                              >  1:1256395/1‑100 (MQ=255)
                                                                       ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTAGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                              >  1:2324578/1‑100 (MQ=255)
                                                                        cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                             >  2:2427535/1‑100 (MQ=255)
                                                                        cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                             >  1:3081336/1‑100 (MQ=255)
                                                                          caGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACTTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCt                           >  1:3971836/1‑100 (MQ=255)
                                                                            gTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcagatcg                         >  2:3278999/1‑94 (MQ=255)
                                                                             tataTGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACt                        >  2:2203127/1‑100 (MQ=255)
                                                                                atGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTggg                     <  2:3569464/100‑1 (MQ=255)
                                                                                  gtaaCATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGaa                   <  2:3182093/98‑1 (MQ=255)
                                                                                  ggAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGaa                   >  2:288374/1‑100 (MQ=255)
                                                                                  ggAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGaa                   >  2:1422024/1‑100 (MQ=255)
                                                                                        tCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATAtt             <  2:3724392/100‑1 (MQ=255)
                                                                                          tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc           <  1:835266/100‑1 (MQ=255)
                                                                                           ggggATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttc          <  1:1327737‑M2/100‑81 (MQ=255)
                                                                                           ggggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCt          >  2:2948675/1‑100 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcctcggcttcttccgaggtgtagatcagatgcggcgggatcccttttt           >  1:427446‑M1/1‑7 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        >  1:1583097‑M1/1‑7 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        >  2:3643237‑M1/1‑7 (MQ=255)
                                                                                             ggATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcag        >  2:647010‑M1/1‑7 (MQ=255)
                                                                                             ggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAc        >  2:529287/1‑100 (MQ=255)
                                                                                              gATCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagc       <  1:3299413‑M1/100‑95 (MQ=255)
                                                                                               aTCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      <  2:3287014‑M1/100‑96 (MQ=255)
                                                                                               aTCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      >  2:768253‑M1/1‑5 (MQ=255)
                                                                                               aTCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      <  1:2149469‑M1/100‑96 (MQ=255)
                                                                                               aTCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCg      >  1:1037394/1‑100 (MQ=255)
                                                                                                tCGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagcc      <  1:2951863‑M1/99‑96 (MQ=255)
                                                                                                 cGAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccat    >  1:19515‑M1/1‑3 (MQ=255)
                                                                                                  gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg   >  2:918186/1‑100 (MQ=255)
                                                                                                  gAccagctccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccat    <  2:777276‑M1/99‑98 (MQ=255)
                                                                                                  gAccagcaccgtctcgatccccagatgttccatatactttggcgcatcggcttcttcctaggtgtagatcagatccggctggatccctttttcagc       <  1:1814264‑M1/96‑95 (MQ=255)
                                                                                                  gAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccata   <  2:1066410‑M1/100‑99 (MQ=255)
                                                                                                  gAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccata   >  1:19321‑M1/1‑2 (MQ=255)
                                                                                                  gAccagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagaacagatccggctggatccctttttcagccata   >  2:3492779‑M1/1‑2 (MQ=255)
                                                                                                   agaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGt  >  2:2450164/1‑100 (MQ=255)
                                                                                                   accagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccataa  >  2:3552969‑M1/1‑1 (MQ=255)
                                                                                                   accagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccataa  >  2:1557063‑M1/1‑1 (MQ=255)
                                                                                                   accagcaccgtctcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttcagccataa  >  2:124965‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGT  >  NC_000913/4627793‑4627991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.