New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627892126 (0.820)9 (0.060) 7/164 NT 6.9% coding (578/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627903 128 (0.900)coding (589/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 185 total aligned reads displayed.

TTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTTT  >  NC_000913/4627805‑4628002
                                                                                                  |                                                                                                   
ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                                    >  2:124965‑M2/1‑99 (MQ=255)
ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                                    <  1:521676‑M2/100‑2 (MQ=255)
ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                                    >  2:1557063‑M2/1‑99 (MQ=255)
ttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGt                                                                                                    >  2:3552969‑M2/1‑99 (MQ=255)
 tATGGCTGAAAAAGGGATCCAGCCGGATCTGTTCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                                   >  2:3492779‑M2/1‑98 (MQ=255)
 tATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                                   >  1:19321‑M2/1‑98 (MQ=255)
   tGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                                 <  1:181770‑M2/100‑5 (MQ=255)
    ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGGAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                                <  2:3521801‑M2/100‑6 (MQ=255)
    ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                                <  2:677554‑M2/100‑6 (MQ=255)
    ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                                <  1:2149469‑M2/100‑6 (MQ=255)
    ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                                 <  1:2951863‑M2/99‑5 (MQ=255)
     gCTGAAAAGGGGATCCAGCCGGACCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                               <  2:3447392‑M2/100‑7 (MQ=255)
     gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                               <  1:3299413‑M2/100‑7 (MQ=255)
     gCTGAAAAAGGGATCCAGCCGGATCTGATCCACACCTCGGAAGAAGCCGATGCGGCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                               >  1:1756748‑M2/1‑94 (MQ=255)
      cttaaaaaGGTACCCAGACGGACCAGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATcc                                                                                              <  1:152418/97‑1 (MQ=255)
      cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATTGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                              <  2:2004071‑M2/100‑8 (MQ=255)
      cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                              >  2:647010‑M2/1‑93 (MQ=255)
        gAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGa                                                                                            >  2:2205625/1‑100 (MQ=255)
         aaaaaGGGATCCCGCCGCATCTGATCTACACCTCGGAAGAAGCCGAGGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                              >  1:427446‑M2/1‑90 (MQ=255)
          agatcagATCCGGCTGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGaaa                                                                                          >  2:3189805/7‑100 (MQ=255)
          aaaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGaaa                                                                                          >  2:1883655/1‑100 (MQ=255)
           aaaGGGATCCAGCCGGATGTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                              >  1:2847926‑M2/1‑88 (MQ=255)
            aaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACg                                                                                        >  2:2437581/1‑100 (MQ=255)
             aGGGATCCAGCCGGATCTGTTCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGt                                                                                       <  2:1734710/100‑1 (MQ=255)
              gggATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTa                                                                                      <  2:753327/100‑1 (MQ=255)
               ggATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTAc                                                                                     >  2:167612/1‑100 (MQ=255)
                gATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTAcc                                                                                    <  2:2413745/100‑1 (MQ=255)
                 aTCCAGCCGGATATGATCTACACCTCGGAAGAAGCCGATGCGCCACAGGATATGGAAAATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTAcc                                                                                    <  1:1560855/99‑1 (MQ=255)
                  tCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGGGACGGAGCTGGTCTATCGTAAACGTAc                                                                                     >  1:3395568/1‑97 (MQ=255)
                    cAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTa                                                                                <  2:3257775/100‑1 (MQ=255)
                     aGCCGAATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTa                                                                                <  1:3474488/99‑1 (MQ=255)
                      gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGAGGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                              >  1:2064992/1‑100 (MQ=255)
                      gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATTCGAAACGTACCTTTATg                                                                              >  1:913295/1‑100 (MQ=255)
                      gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                              <  2:82774/100‑1 (MQ=255)
                      gCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATg                                                                              <  1:677552/100‑1 (MQ=255)
                        cGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAg                                                                            >  2:3107422/1‑100 (MQ=255)
                          gatctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTa                                                                          <  2:3180105/100‑1 (MQ=255)
                           atctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTAt                                                                         >  1:1546713/1‑100 (MQ=255)
                              tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                                      >  2:2892958/1‑100 (MQ=255)
                              tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                                      >  1:1378454/1‑100 (MQ=255)
                               gatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGc                                                                     <  2:3906218/100‑1 (MQ=255)
                                 tctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCgg                                                                   <  2:564769/100‑1 (MQ=255)
                                   tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGACCATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCACCGGTg                                                                 >  1:773363/1‑100 (MQ=255)
                                   tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTg                                                                 <  2:172296/100‑1 (MQ=255)
                                     cacCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAGCGTACCTTTATGAGTATCAGCGGTgcg                                                               >  2:4087879/1‑100 (MQ=255)
                                       catcggctgaagCGGATGGGCCACAGTATATGGAATATCGGGGGTTCGAGACGGCGCTGGGCGATTCGAAACGTACCTTTATGAGTATTAGCGGTGCGCa                                                             <  1:3942745/92‑1 (MQ=255)
                                           ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                                         <  2:4202976/100‑1 (MQ=255)
                                           ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                                         <  2:1428482/100‑1 (MQ=255)
                                           ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                                         <  2:2116387/100‑1 (MQ=255)
                                           ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                                         <  1:3682490/100‑1 (MQ=255)
                                              agaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgc                                                      >  1:2777519/1‑100 (MQ=255)
                                              agaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgc                                                      >  1:3105117/1‑100 (MQ=255)
                                               gaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgcg                                                     <  1:2715354/100‑1 (MQ=255)
                                               gaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgcg                                                     <  2:1904952/100‑1 (MQ=255)
                                                aagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGa                                                    <  1:3519545/100‑1 (MQ=255)
                                                 agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                                   <  1:1679870/100‑1 (MQ=255)
                                                 agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                                   >  1:1116812/1‑100 (MQ=255)
                                                 agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                                   >  2:1844797/1‑100 (MQ=255)
                                                     gATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                               >  2:2983918/1‑100 (MQ=255)
                                                       tGCACCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                               <  2:270911/98‑1 (MQ=255)
                                                        gcgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAccc                                              <  1:2559994/98‑1 (MQ=255)
                                                        gcgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGt                                            <  1:1011752/100‑1 (MQ=255)
                                                         cgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGCAACGTCCCTTTATGAGTATCAGCGGTGCCCAGATCCCCGAAAACCCg                                             >  2:3628294/1‑98 (MQ=255)
                                                          gcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTc                                          <  2:3559760/100‑1 (MQ=255)
                                                          cgatctgTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTc                                          <  1:3278987/94‑1 (MQ=255)
                                                           ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                                         <  2:1268920/100‑1 (MQ=255)
                                                           ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                                         <  1:3821088/100‑1 (MQ=255)
                                                           ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                                         <  2:3796870/100‑1 (MQ=255)
                                                           ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                                         >  1:147823/1‑100 (MQ=255)
                                                           ccACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTAGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTcc                                         >  1:2324578/1‑100 (MQ=255)
                                                            cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                                        <  1:102156/100‑1 (MQ=255)
                                                            cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                                        >  1:3081336/1‑100 (MQ=255)
                                                            cacaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCg                                        <  1:1165089/100‑1 (MQ=255)
                                                              caGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACTTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCt                                      >  1:3971837/1‑100 (MQ=255)
                                                                   tatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTgg                                 >  1:3595905/1‑100 (MQ=255)
                                                                    atGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTggg                                >  2:2094427/1‑100 (MQ=255)
                                                                      ggAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGaa                              >  2:1422024/1‑100 (MQ=255)
                                                                        aaCATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAata                            <  2:2180829/100‑1 (MQ=255)
                                                                          cATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAatat                           <  2:3286143/99‑1 (MQ=255)
                                                                          actCTGGGGATCGCGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAatata                          <  2:2767759/98‑1 (MQ=255)
                                                                            tCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATAtt                        <  2:3724392/100‑1 (MQ=255)
                                                                             cTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttt                       <  2:769641‑M2/100‑79 (MQ=255)
                                                                             cTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctcgatccctttt                       <  1:967239‑M2/100‑79 (MQ=255)
                                                                              tGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatcccttttt                      <  1:1764837‑M2/100‑80 (MQ=255)
                                                                              tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc                      <  1:835266/100‑1 (MQ=255)
                                                                              tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc                      <  2:395503/100‑1 (MQ=255)
                                                                               ggggATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttc                     <  1:1327737‑M2/100‑81 (MQ=255)
                                                                                gggATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttttca                    <  2:3649860‑M2/100‑82 (MQ=255)
                                                                                   aTCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCg                 >  1:1412378/1‑100 (MQ=255)
                                                                                    tggagaCGGTGCTGGTCGATCCGAAACGTACCGTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGa                <  1:2505420/98‑1 (MQ=255)
                                                                                      gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg              >  2:918186/1‑100 (MQ=255)
                                                                                       agaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGt             <  2:4168099/100‑1 (MQ=255)
                                                                                       agaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGt             >  2:474914/1‑100 (MQ=255)
                                                                                          cGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGaa          >  2:1744458/1‑100 (MQ=255)
                                                                                           tgTGCTGGTCGATCCGAAACGTAGCTGTATGAGTATCATCGGTGCGTAGAGCCGCGAAAACCCTGTCCGCGACTGGGAATATATTCCTACCGCAGTGAAg         <  1:3598788/99‑1 (MQ=255)
                                                                                           ggTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAg         <  2:4252869/100‑1 (MQ=255)
                                                                                            gTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGc        <  2:1116815/100‑1 (MQ=255)
                                                                                            gTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGc        <  1:1058908/100‑1 (MQ=255)
                                                                                              gCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCg      >  2:3387888/1‑100 (MQ=255)
                                                                                                 ggTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGttt   >  2:2572494/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTTT  >  NC_000913/4627805‑4628002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.