New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4639245155 (1.010)10 (0.070) 7/166 NT 6.2% coding (1068/1353 nt) creD inner membrane protein
?NC_000913 = 4639256 157 (1.100)coding (1079/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 199 total aligned reads displayed.

AATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGAT  >  NC_000913/4639146‑4639344
                                                                                                   |                                                                                                   
aaTGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCC                                                                                                     <  2:920090‑M1/100‑1 (MQ=255)
     aaTATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCt                                                                                                >  1:3025660/1‑100 (MQ=255)
     aaTATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCt                                                                                                <  2:3894007/100‑1 (MQ=255)
      atatTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTg                                                                                               <  2:2653632/100‑1 (MQ=255)
      atatTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTg                                                                                               >  1:1309326/1‑100 (MQ=255)
       tatTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATTGATAATCGCCAGTCTGa                                                                                              >  1:3657183/1‑100 (MQ=255)
        atTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGAt                                                                                             <  2:645667/100‑1 (MQ=255)
        atTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGAt                                                                                             >  2:443750/1‑100 (MQ=255)
          ttGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTg                                                                                           >  1:47543/1‑100 (MQ=255)
           tGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTgg                                                                                          <  2:158181/100‑1 (MQ=255)
              tggtggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGggc                                                                                       >  2:1382046‑M2/1‑97 (MQ=255)
                 tggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgat                                                                                    <  2:1984841‑M1/100‑18 (MQ=255)
                    ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattat                                                                                 <  1:501413‑M1/100‑21 (MQ=255)
                    ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAAt                                                                                 >  2:770260/1‑100 (MQ=255)
                     gCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattatc                                                                                <  2:1830145‑M1/100‑22 (MQ=255)
                     gCTGTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATg                                                                                <  1:1165787/100‑1 (MQ=255)
                      cTTTCATTGGTGATGTTTTATTTGTTCTTGTTGGTGCTGTCCGAACATACCGGTTTTGCTGTGGAATGCATAATTGTCAGTCTGATTGGCGGGATa                                                                                   <  1:1574430/96‑1 (MQ=255)
                      cTTTCATAGGTAATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGa                                                                               >  1:2244926/1‑100 (MQ=255)
                       tttCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattatcca                                                                              <  2:691607‑M1/100‑24 (MQ=255)
                        ttCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattatccat                                                                             <  1:2097088‑M1/100‑25 (MQ=255)
                        ttCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAAc                                                                             <  2:2387919/100‑1 (MQ=255)
                        ttCATTGGTGATGTTTTATTTGCTCGTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattatccat                                                                             <  1:2103116‑M1/100‑25 (MQ=255)
                         tCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACg                                                                            <  1:2169610/100‑1 (MQ=255)
                         tCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACg                                                                            <  2:3232252/100‑1 (MQ=255)
                          cATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCccaatcagactggcgattatccatgc                                                                           <  1:1787084‑M1/100‑27 (MQ=255)
                          cATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACgg                                                                           >  2:2233955/1‑100 (MQ=255)
                            ttGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGta                                                                         <  1:1195508/100‑1 (MQ=255)
                            ttGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGta                                                                         <  1:3111995/100‑1 (MQ=255)
                              ggTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtatt                                                                       >  1:4049545/1‑100 (MQ=255)
                               gcgATGTTTTACTTGCTCTTGCTGGCGCTTGCTGTCCTCACCTGTGTTACCGTGGCATGGATACTCGCCTGTCTGATCGGCGCGATAATTAACGGtatt                                                                       <  1:2736438/97‑1 (MQ=255)
                                tGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtattta                                                                     >  2:3448623/1‑100 (MQ=255)
                                    gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                 <  1:1109339/100‑1 (MQ=255)
                                    gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                 >  2:2446835/1‑100 (MQ=255)
                                     ttttATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGc                                                                >  1:770878/1‑100 (MQ=255)
                                      tttATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCa                                                               >  2:2059693/1‑100 (MQ=255)
                                        tATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                             >  1:3529307/1‑100 (MQ=255)
                                        tATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                             <  2:2084309/100‑1 (MQ=255)
                                            tGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGt                                                         >  1:3815277/1‑100 (MQ=255)
                                               tctTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTAtt                                                      <  1:3924666/100‑1 (MQ=255)
                                                ctTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTg                                                     <  2:2965058/100‑1 (MQ=255)
                                                ctTGCTGGCGCTTTCCGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTTGGGCGAGAATGAACGGTATTTATTTGCAAGCGGTAtt                                                      <  2:578097/99‑1 (MQ=255)
                                                  tGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGaa                                                   >  2:1313434/1‑100 (MQ=255)
                                                    cTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                 >  1:776270/1‑100 (MQ=255)
                                                    cTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCCGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                 >  2:1115017/1‑100 (MQ=255)
                                                     tGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGACCGGTATTTATTTGCAAGCGGTATTGAAAgg                                                <  1:1516853/100‑1 (MQ=255)
                                                     tGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAgg                                                <  1:3455522/100‑1 (MQ=255)
                                                      ggCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAgg                                                >  2:2903495/1‑99 (MQ=255)
                                                        cgcTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTTCAAGCGGTATTGAAAGGTTg                                             >  2:1690752/1‑100 (MQ=255)
                                                          cTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGt                                           >  2:2747899/1‑100 (MQ=255)
                                                           tttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                          <  2:1457575/100‑1 (MQ=255)
                                                            ttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGc                                         <  2:2417595/100‑1 (MQ=255)
                                                            ttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGc                                         <  1:2473562/100‑1 (MQ=255)
                                                              cTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                       >  2:221866/1‑100 (MQ=255)
                                                              cTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                       >  2:3597919/1‑100 (MQ=255)
                                                               tggacgtACCGGTTTTAGTGTGGGATGGATAATCGCCAGTCTGAGTGGGGCGGGAAGGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                          <  1:3387846/90‑1 (MQ=255)
                                                               tGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAAc                                      <  1:896568/100‑1 (MQ=255)
                                                                gAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACa                                     >  2:91578/1‑100 (MQ=255)
                                                                gAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACa                                     <  1:1630791/100‑1 (MQ=255)
                                                                gAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACa                                     >  2:2010071/1‑100 (MQ=255)
                                                                    aTACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAt                                 >  2:1784345/1‑100 (MQ=255)
                                                                     tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAGCAGCAtg                                >  1:2289672/1‑100 (MQ=255)
                                                                     tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                <  2:3980023/100‑1 (MQ=255)
                                                                     tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                >  1:943113/1‑100 (MQ=255)
                                                                     tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                >  1:598881/1‑100 (MQ=255)
                                                                     tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAt                                 <  1:1080180/99‑1 (MQ=255)
                                                                      aCCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgt                               >  1:1863564/1‑100 (MQ=255)
                                                                      aCCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgt                               >  1:2188547/1‑100 (MQ=255)
                                                                       ccGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgtt                              >  1:1000096/1‑100 (MQ=255)
                                                                         ggTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgttgt                            <  2:302936/100‑1 (MQ=255)
                                                                           ttttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGttt                          <  2:3739553/100‑1 (MQ=255)
                                                                            tttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACCGCATGTTGTTTa                         <  1:3567174/100‑1 (MQ=255)
                                                                              tACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTa                         >  1:4126596/1‑98 (MQ=255)
                                                                              tACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAcc                       >  2:2149435/1‑100 (MQ=255)
                                                                              tACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAcc                       <  2:1042020/100‑1 (MQ=255)
                                                                                ccGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCt                     >  1:238297/1‑100 (MQ=255)
                                                                                ccGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCt                     >  2:42043/1‑100 (MQ=255)
                                                                                  gTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcg                   <  1:36897/100‑1 (MQ=255)
                                                                                   tGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgc                  <  2:1837114/100‑1 (MQ=255)
                                                                                    ggCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcgc                  >  1:2922883/1‑99 (MQ=255)
                                                                                     gCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCgcgc                >  2:1850379/1‑100 (MQ=255)
                                                                                     gCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCgcgc                <  1:148215/100‑1 (MQ=255)
                                                                                      cATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCt               >  1:557121/1‑100 (MQ=255)
                                                                                      cATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCt               >  2:1084746/1‑100 (MQ=255)
                                                                                       ttccgatctCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg              <  2:2358167/92‑1 (MQ=255)
                                                                                       aTGGATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtaggttcagaaagcgccagcaagagcaaataaaacatcaccaatgaa              <  1:4064241‑M2/100‑77 (MQ=255)
                                                                                         ggATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaag            <  1:4184754‑M2/100‑79 (MQ=255)
                                                                                          gATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagc           <  1:3582402‑M2/100‑80 (MQ=255)
                                                                                          gATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttg           <  2:1720721/100‑1 (MQ=255)
                                                                                          gATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttg           <  1:1699242/100‑1 (MQ=255)
                                                                                           aTAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttgt          <  1:399423/100‑1 (MQ=255)
                                                                                           aTAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttgt          >  2:2167931/1‑100 (MQ=255)
                                                                                            tAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTgttgtt         <  2:2386435/100‑1 (MQ=255)
                                                                                              aTCGCCccaatcagactggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagcccca       <  2:2921574‑M1/100‑95 (MQ=255)
                                                                                               tCGCCccaatcagactggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagccccac      <  2:85758‑M1/100‑96 (MQ=255)
                                                                                                cGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgagatcggaa     >  1:2358161/1‑91 (MQ=255)
                                                                                                 gCCccaatcagactggcgattatccatgccacggtaaaaccggtatgttcacaaagcgccagcaagagcaaataaaacatcaccaatgaaagccccacca    <  1:2852875‑M1/100‑98 (MQ=255)
                                                                                                 gCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg    <  2:3659339/100‑1 (MQ=255)
                                                                                                 gCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg    >  2:3421062/1‑100 (MQ=255)
                                                                                                  ccAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGa   >  2:2781798/1‑100 (MQ=255)
                                                                                                   cAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGAt  <  2:532374/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGAT  >  NC_000913/4639146‑4639344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.