BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4639245	155 (1.010)	10 (0.070)	7/166	NT	6.2%	coding (1068/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4639256	157 (1.100)	10 (0.070)	7/166	NT	6.2%	coding (1079/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 190 total aligned reads displayed.

TGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGATGTG  >  NC_000913/4639157‑4639355

   tggtggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTGTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGggc                                                                                                  <  1:2852875‑M2/100‑4 (MQ=255)

     gtggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGggcga                                                                                                <  2:85758‑M2/100‑6 (MQ=255)

      tggGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGggcgat                                                                                               <  2:2921574‑M2/100‑7 (MQ=255)

        gggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATaa                                                                                             <  2:2387587/100‑1 (MQ=255)

         ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAAt                                                                                            >  2:919585/1‑100 (MQ=255)

         ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAAt                                                                                            <  2:1085091/100‑1 (MQ=255)

         ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAAt                                                                                            >  2:583148/1‑100 (MQ=255)

         ggCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAAt                                                                                            >  2:770260/1‑100 (MQ=255)

          gCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATg                                                                                           <  2:3114942/100‑1 (MQ=255)

          gCTGTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATg                                                                                           <  1:1165787/100‑1 (MQ=255)

             ttCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAAc                                                                                        <  2:2387919/100‑1 (MQ=255)

              tCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACg                                                                                       <  2:440972/100‑1 (MQ=255)

                 ttGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGta                                                                                    <  1:3111995/100‑1 (MQ=255)

                 ttGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGta                                                                                    <  1:1195508/100‑1 (MQ=255)

                  tGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtat                                                                                   <  1:1607842/100‑1 (MQ=255)

                   ggTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtatt                                                                                  >  1:4049545/1‑100 (MQ=255)

                     tGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtattta                                                                                >  2:3448623/1‑100 (MQ=255)

                     tGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGtattta                                                                                >  2:3243328/1‑100 (MQ=255)

                         gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATATTCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                            <  1:2322687/100‑1 (MQ=255)

                         gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                            <  1:1109339/100‑1 (MQ=255)

                         gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                            >  2:2217098/1‑100 (MQ=255)

                         gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                            >  2:2446835/1‑100 (MQ=255)

                         gTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTg                                                                            >  2:1653206/1‑100 (MQ=255)

                          ttttATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGc                                                                           >  1:770878/1‑100 (MQ=255)

                           tttATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCa                                                                          <  2:3853345/100‑1 (MQ=255)

                             tATTTGCTCTTGCTGGCGCTTTCTGAGCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                        <  1:953544/100‑1 (MQ=255)

                             tATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAg                                                                        <  1:832507/100‑1 (MQ=255)

                                 tGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGc                                                                       >  1:3509316/1‑97 (MQ=255)

                                 tGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGt                                                                    >  1:1973230/1‑100 (MQ=255)

                                    tctTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTAtt                                                                 <  1:2194673/100‑1 (MQ=255)

                                     ctTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTg                                                                <  2:2277594/100‑1 (MQ=255)

                                     ctTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTg                                                                >  2:557254/1‑100 (MQ=255)

                                      ttGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGa                                                               >  1:1524570/1‑100 (MQ=255)

                                       tGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGaa                                                              >  2:1313434/1‑100 (MQ=255)

                                        gCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGGTTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGaaa                                                             <  1:3039795/100‑1 (MQ=255)

                                        gCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGaaa                                                             >  2:201017/1‑100 (MQ=255)

                                         cTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAg                                                            >  1:776270/1‑100 (MQ=255)

                                           ggCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAgg                                                           >  2:2903495/1‑99 (MQ=255)

                                             cgcTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTTCAAGCGGTATTGAAAGGTTg                                                        >  2:1690752/1‑100 (MQ=255)

                                               cTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGt                                                      >  2:2747899/1‑100 (MQ=255)

                                                tttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                                     <  1:453568/100‑1 (MQ=255)

                                                tttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                                     <  1:2259093/100‑1 (MQ=255)

                                                 ttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGc                                                    <  2:1283264/100‑1 (MQ=255)

                                                 ttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGc                                                    <  2:2417595/100‑1 (MQ=255)

                                                 ttCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAAAGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                                     >  1:3546613/1‑99 (MQ=255)

                                                  tCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCa                                                   >  2:1059103/1‑100 (MQ=255)

                                                   cTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                                  >  2:3597919/1‑100 (MQ=255)

                                                   cTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCaa                                                  >  1:2619644/1‑100 (MQ=255)

                                                    tggacgtACCGGTTTTAGTGTGGGATGGATAATCGCCAGTCTGAGTGGGGCGGGAAGGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTg                                                     <  1:3387846/90‑1 (MQ=255)

                                                    tGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTAGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAAc                                                 >  1:2366282/1‑100 (MQ=255)

                                                       aCATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGc                                              >  1:3909172/1‑100 (MQ=255)

                                                        cATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAAc                                                 <  2:2230273/96‑1 (MQ=255)

                                                        cATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCa                                             <  1:2177281/100‑1 (MQ=255)

                                                         aTACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAt                                            >  2:1784345/1‑100 (MQ=255)

                                                          tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                           >  1:598881/1‑100 (MQ=255)

                                                          tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtg                                           >  1:942741/1‑100 (MQ=255)

                                                          tACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAt                                            <  1:1080180/99‑1 (MQ=255)

                                                           aCCGGTTTTACCGTGGCATGGATAATCGCCAGTCCGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgt                                          <  2:4045115/100‑1 (MQ=255)

                                                            ccGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgtt                                         >  1:1000096/1‑100 (MQ=255)

                                                             cGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgttg                                        >  2:1496980/1‑100 (MQ=255)

                                                              ggTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgttgt                                       <  2:302936/100‑1 (MQ=255)

                                                              ggTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCAtgttgt                                       >  1:3982644/1‑100 (MQ=255)

                                                                ttttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGttt                                     >  1:149776/1‑100 (MQ=255)

                                                                ttttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGttt                                     <  1:4123655/100‑1 (MQ=255)

                                                                 tttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTa                                    <  1:1432270/100‑1 (MQ=255)

                                                                 tttACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGATATCTATTTGCAAGCGGAATTGAAAGGCTGGTGCAACAGCATGTTGTTTa                                    >  1:1694425/1‑100 (MQ=255)

                                                                   tACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAcc                                  >  2:2070154/1‑100 (MQ=255)

                                                                     ccGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTAccn                                 <  1:2395857/99‑2 (MQ=255)

                                                                       gTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcg                              <  1:36897/100‑1 (MQ=255)

                                                                       gTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTcg                              >  1:3675573/1‑100 (MQ=255)

                                                                          gCATGGATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatg                           <  1:1787084‑M2/100‑75 (MQ=255)

                                                                            aTGGATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcacgagcaaataaaacatcaccaatgaa                         <  1:2103116‑M2/100‑77 (MQ=255)

                                                                            aTGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtg                         <  2:2361709/100‑1 (MQ=255)

                                                                             tGGATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaa                        <  2:691607‑M2/100‑78 (MQ=255)

                                                                              ggATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaag                       <  1:4184754‑M2/100‑79 (MQ=255)

                                                                               gATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagc                      <  2:1830145‑M2/100‑80 (MQ=255)

                                                                               gATAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagc                      <  1:3582402‑M2/100‑80 (MQ=255)

                                                                               gATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttg                      <  2:1720721/100‑1 (MQ=255)

                                                                               gATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgttg                      >  2:1845089/1‑100 (MQ=255)

                                                                               gATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCtgtt                       <  2:1913573/99‑1 (MQ=255)

                                                                                aTAATCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagcc                     <  1:501413‑M2/100‑81 (MQ=255)

                                                                                   aTCGCCAGTCTGATTGGggcgattatccatgccacggtaaaaccggtatgttcagaaagcgccagcaagagcaaataaaacatcaccaatgaaagcccca                  <  2:1984841‑M2/100‑84 (MQ=255)

                                                                                   aTCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGc                  >  2:216470/1‑100 (MQ=255)

                                                                                   aTCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGc                  >  2:2143031/1‑100 (MQ=255)

                                                                                     cGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTg                <  2:1455984/100‑1 (MQ=255)

                                                                                      gCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg               >  2:3421062/1‑100 (MQ=255)

                                                                                      gCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg               <  2:3659339/100‑1 (MQ=255)

                                                                                      gCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTgg               >  1:3761468/1‑100 (MQ=255)

                                                                                       ccAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGa              >  2:2781798/1‑100 (MQ=255)

                                                                                        cAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGAt             <  2:532374/100‑1 (MQ=255)

                                                                                          gTCTGATTGGTGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATgg           <  1:4158594/100‑1 (MQ=255)

                                                                                          gTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATgg           >  2:3715389/1‑100 (MQ=255)

                                                                                          gTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATgg           <  1:343745/100‑1 (MQ=255)

                                                                                            cTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGgtg         <  2:2707112/100‑1 (MQ=255)

                                                                                              gATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGtgtg       <  1:1790298/100‑1 (MQ=255)

                                                                                              gATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGCTTACCCTCGCGCTGTTGTTGCTGGATGGtgtg       <  2:4054590/100‑1 (MQ=255)

                                                                                               aTTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGa      >  2:3924345/1‑100 (MQ=255)

                                                                                                 tGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGAtg    <  1:529634/100‑1 (MQ=255)

                                                                                                   gggCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGAtgtg  <  2:296927/100‑1 (MQ=255)

                                                                                                   gggCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGAtgtg  >  1:2660314/1‑100 (MQ=255)

TGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGATGTG  >  NC_000913/4639157‑4639355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.