New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526041	NA (NA)	7 (0.050)	4/170	NT	100%	coding (2781/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526069	0 (0.000)					coding (2809/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACG  >  NC_000913/525967‑526140                                                                           |                                                                                                    gCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGC                                                                            <  2:2826705‑M2/100‑1 (MQ=255) gCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGC                                                                            >  2:3373234‑M2/1‑100 (MQ=255)  cACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCC                                                                           >  2:659417‑M2/1‑100 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACTGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                          >  1:1394856‑M2/1‑100 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                          >  2:1269726‑M2/1‑100 (MQ=255)   aCCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCG                                                                          >  2:3800307‑M2/1‑100 (MQ=255)    ccAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGG                                                                         >  2:1398197‑M2/1‑100 (MQ=255)                                                                       tGCACCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggctgtccagg      <  1:1940074‑M2/100‑68 (MQ=255)                                                                          aCCCGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccaggtct   <  2:3544118‑M2/100‑71 (MQ=255)                                                                           cccGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccaggtctg  <  1:3179246‑M2/100‑72 (MQ=255)                                                                           cccGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccaggtctg  <  2:3173350‑M2/100‑72 (MQ=255)                                                                           cccGGACAGTACACTCACAGTGTGGCCGGgtgcagctccgggtccggcagccggttgcccgccgggtccgtggcatacgggatgcggatgtccaggt     <  1:1370892‑M2/97‑69 (MQ=255)                                                                           |                                                                                                    GCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACG  >  NC_000913/525967‑526140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.