New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2593024NA (NA)11 (0.080) 7/164 NT NA noncoding (47/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2593056 NA (NA)noncoding (79/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 213 total aligned reads displayed.

AAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACG  >  NC_000913/2592957‑2593155
                                                                                                   |                                                                                                   
 agTGAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                    <  2:194571/100‑1 (MQ=255)
 agTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGcc                                                                                                    >  2:3396453/1‑100 (MQ=255)
  gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCa                                                                                                   >  1:3723602/1‑100 (MQ=255)
  gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGC                                                                                                     <  2:4089899‑M2/98‑1 (MQ=255)
    aaGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAgg                                                                                                 <  2:2746037/100‑1 (MQ=255)
     aGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGt                                                                                                <  1:1931073/100‑1 (MQ=255)
      gCTGCGTGCTCAACCGTAGGCCGGATAAGGCTTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAgg                                                                                                 <  1:427581/98‑1 (MQ=255)
      gCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTa                                                                                               >  1:4122708/1‑100 (MQ=255)
      gCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTa                                                                                               >  2:1725805/1‑100 (MQ=255)
       cTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTaa                                                                                              >  1:1628764/1‑100 (MQ=255)
         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                                                            <  2:3308059/100‑1 (MQ=255)
         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATc                                                                                            >  2:1481408/1‑100 (MQ=255)
           gTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTg                                                                                          >  2:325922/1‑100 (MQ=255)
           gTGCTCAACCCTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCACTGGTGCACGATGCCTGACGCGACGCTCACCCGTCTGATCAGGCCAGGTAATcag                                                                                          >  1:718315/1‑98 (MQ=18)
              cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                                                       <  1:3525146/100‑1 (MQ=255)
              cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCt                                                                                       <  1:3125992/100‑1 (MQ=255)
               tCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtt                                                                                      >  2:1698316/1‑100 (MQ=255)
                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                     >  1:1137177/1‑100 (MQ=255)
                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                     <  1:4175745/100‑1 (MQ=255)
                 aaCCGTAGGCCGGATAAGGCGTTAACGCCGCATCAGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCtttt                                                                                    <  1:2243829/100‑1 (MQ=255)
                   ccGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAc                                                                                  >  1:2587056/1‑100 (MQ=255)
                   ccGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTGAc                                                                                  <  2:163552/100‑1 (MQ=255)
                    ccattgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAca                                                                                 >  1:2968520/6‑100 (MQ=25)
                      tAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                                                               <  1:119523/100‑1 (MQ=255)
                       ttgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatca                                                                              >  1:1410771/3‑100 (MQ=37)
                        tgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCCGGCCAGGTAATCTGTCTTTTAcatcat                                                                             >  2:112308/2‑100 (MQ=37)
                        ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTTTTGGCAGGCCAGGTAATCTGTCGTTTCcatcat                                                                             >  2:1067001/1‑100 (MQ=21)
                        ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatcat                                                                             >  2:225032/1‑100 (MQ=255)
                        ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatca                                                                              >  1:1800025/1‑99 (MQ=255)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  2:2335146/1‑100 (MQ=37)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  2:1895419/1‑100 (MQ=37)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  1:612539/1‑100 (MQ=37)
                         gCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  1:3953641/1‑100 (MQ=255)
                          ccggatgcggCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                                                           >  2:3095115/9‑100 (MQ=37)
                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                          <  1:9482/100‑1 (MQ=255)
                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                          <  1:2904069/100‑1 (MQ=255)
                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                          <  1:3993250/100‑1 (MQ=255)
                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                          <  2:3131505/100‑1 (MQ=255)
                            ggATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCa                                                                         <  2:285278/100‑1 (MQ=255)
                              aTAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCaa                                                                        <  2:3887208/99‑1 (MQ=255)
                              aTAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAAt                                                                       <  2:3372730/100‑1 (MQ=255)
                               tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                                                      <  2:1030418/100‑1 (MQ=255)
                               tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                                                      <  2:1212587/100‑1 (MQ=255)
                               tAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                                                      <  2:1094631/100‑1 (MQ=255)
                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                                                   >  2:743059/1‑100 (MQ=255)
                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                                                   >  1:3488093/1‑100 (MQ=255)
                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                                                   >  1:3655144/1‑100 (MQ=255)
                                  ggCGTTAACGCCGCATCAGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCATATCAGACCAGGAAATCTGTCTTTTACATCATTTCAATcaca                                                                   >  1:426830/1‑100 (MQ=37)
                                       tAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCCTTTCAATCAcatcat                                                               >  1:2019945/1‑99 (MQ=255)
                                       tAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatc                                                              >  2:46954/1‑100 (MQ=255)
                                          cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACatcatcatc                                                           >  2:1849514/1‑100 (MQ=255)
                                           gccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCCGTCTTTGACATCATTTCAATCACatcatcatc                                                           >  1:3885355/1‑99 (MQ=255)
                                             cgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGcc                                                        <  1:565774/100‑1 (MQ=255)
                                              gcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggccta                                                       <  1:3947243‑M2/100‑47 (MQ=255)
                                               cATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAg                                                      <  2:2169367/100‑1 (MQ=255)
                                               cATCCGGCAACGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAg                                                      <  1:2801084/100‑1 (MQ=255)
                                                aTCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAgg                                                     <  2:2537984/100‑1 (MQ=255)
                                                 tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                                                    >  2:4157861/1‑100 (MQ=255)
                                                 tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                                                    <  2:3416883/100‑1 (MQ=255)
                                                    ggCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTa                                                 <  2:3567249/100‑1 (MQ=255)
                                                    ggCAATGGTGAACGATGCCTGATGCGACGCTCACGCGGCTTATCAGGCCAGGTAATCTGTCTTTTACATCATGTCAATCACATCATCATCGCCAGGCTTa                                                 >  2:2984190/1‑100 (MQ=255)
                                                         tGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGcc                                            <  2:2903860/100‑1 (MQ=255)
                                                         tGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGcc                                            >  1:1737508/1‑100 (MQ=255)
                                                         tGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGcc                                            <  2:4025050/100‑1 (MQ=255)
                                                          ggTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATAATTTCAATCACATCATCATCGCCAGGCTTACCGcaa                                           >  1:883021/1‑98 (MQ=255)
                                                           gTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCAc                                          <  2:3656888/100‑1 (MQ=255)
                                                            tGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACt                                         <  1:1014283/100‑1 (MQ=255)
                                                             gAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACtt                                        <  1:1189978/100‑1 (MQ=255)
                                                               aCGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAg                                      <  1:3369574/100‑1 (MQ=255)
                                                                cGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAgc                                     <  1:1698311/100‑1 (MQ=255)
                                                                    gCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttactt                                 <  2:1919766‑M2/100‑69 (MQ=255)
                                                                    gCCTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttactt                                 <  2:3175775‑M2/100‑69 (MQ=255)
                                                                     ccTGATGCGACGCTCACGCGTCTTATCAGGCatcgttcaccatagccggaagcggcgttaacgccttatccggcctacggtagagcactcagcttacttc                                <  1:1525453‑M2/100‑70 (MQ=255)
                                                                      cTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtcg                               >  2:1621174/1‑100 (MQ=255)
                                                                      cTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtcg                               >  1:3741913/1‑100 (MQ=255)
                                                                        gATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtcgtc                             >  1:3842358/1‑100 (MQ=255)
                                                                         atgcaccGCACACGTGTCTTATCAGGCCAGGTAATCTGTC‑‑TTACATCACTTCACTCACATCATCCTCGCCAGGCTTACCGCGACTTAGCGCTtcgtc                             <  1:2353666/91‑1 (MQ=255)
                                                                          tGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACAGCATCATCGCCAGGCTTACCGCCACTTAGCGCTtcgtcg                            <  1:3830186/99‑1 (MQ=255)
                                                                            cGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaaa                         >  2:2792570/1‑100 (MQ=255)
                                                                            cGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaaa                         <  1:2515997/100‑1 (MQ=255)
                                                                             gACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaat                        <  2:3598284/100‑1 (MQ=255)
                                                                              aCGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaata                       <  1:3458877/100‑1 (MQ=255)
                                                                                  tCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGt                   >  2:500230/1‑100 (MQ=255)
                                                                                   cACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGtt                  >  2:2373555/1‑100 (MQ=255)
                                                                                   cACGCGTCTTATCACCCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATg                    >  1:4160958/1‑98 (MQ=255)
                                                                                     cgcgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTc                <  2:2469989/100‑1 (MQ=255)
                                                                                       cgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATACTGTTTCgg              <  2:1522055/100‑1 (MQ=255)
                                                                                       cgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCgg              <  2:2302927/100‑1 (MQ=255)
                                                                                       cgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCgg              <  2:1330926/100‑1 (MQ=255)
                                                                                           ttATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg          <  2:2200015/100‑1 (MQ=255)
                                                                                           ttATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg          <  2:278192/100‑1 (MQ=255)
                                                                                            tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         <  2:945295/100‑1 (MQ=255)
                                                                                            tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         >  1:1310819/1‑100 (MQ=255)
                                                                                            tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         <  2:260508/100‑1 (MQ=255)
                                                                                             aTCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccag        >  1:3194355‑M2/1‑7 (MQ=255)
                                                                                                 ggCatcgttcaccattgccggatgcggcgttaacggcttatccggcctacggttgagcactcggcttacttcttcggttgatcctttttcggccagtcg     <  1:2568388‑M2/99‑97 (MQ=255)
                                                                                                  gCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAAc   <  2:197161/100‑1 (MQ=255)
                                                                                                   ccAGGTAATCTGTCTCTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACg  >  1:381728/1‑100 (MQ=255)
                                                                                                   catcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgtcg  >  2:3217490‑M2/1‑1 (MQ=255)
                                                                                                   catcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgtc   <  1:2179737‑M2/99‑99 (MQ=255)
                                                                                                   |                                                                                                   
AAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCACGCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACG  >  NC_000913/2592957‑2593155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.