New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3428910 =23 (0.150)14 (0.100) 8/168 NT 39.2% intergenic (‑148/‑326) rrsD/yrdA 16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein
?NC_000913 = 4207974 NA (NA)intergenic (‑442/‑173) purH/rrsE IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

Only 100 of 194 total aligned reads displayed.

CTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207886‑4208073
                                                                                        |                                                                                                   
cTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcg                                                                                          >  2:1804357/1‑100 (MQ=31)
 ttCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcgc                                                                                         >  1:2971164/1‑100 (MQ=32)
 ttCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcgc                                                                                         >  1:2758580/1‑100 (MQ=32)
  tCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCt                                                                                        >  1:1137028/1‑100 (MQ=32)
   cacacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTa                                                                                       >  2:4090290/1‑100 (MQ=35)
   cacacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTa                                                                                       >  1:1945887/1‑100 (MQ=35)
     cacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     >  2:96310/1‑100 (MQ=35)
     cacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     >  2:2605417/1‑100 (MQ=38)
      acaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAg                                                                                    >  1:425036/1‑100 (MQ=38)
      acaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAg                                                                                    >  2:2430420/1‑100 (MQ=38)
       caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgc                                                                                   <  1:217661/100‑1 (MQ=40)
         aaCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgcgc                                                                                 >  2:3922739/1‑100 (MQ=255)
          aCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCAACTCGCGACAGTACGCTAAAGcgcg                                                                                >  1:3390794/1‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  2:1174948/1‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  1:2353796/1‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  2:2215645/1‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  2:3700359/1‑100 (MQ=255)
             gCCGGTTCGGTTGAAGAGAAAAATCCTGAAATACAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             >  2:4054878/1‑100 (MQ=255)
                ggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAGGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGc                                                                            >  1:1066991/1‑98 (MQ=255)
                 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  2:3492255/100‑1 (MQ=255)
                 gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         >  1:984248/1‑100 (MQ=255)
                  ttcggttGAAGAGCAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACt                                                                        <  2:2479796/100‑1 (MQ=255)
                     ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                     >  2:2274949/1‑100 (MQ=255)
                     ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                     >  2:1706068/1‑100 (MQ=255)
                      gttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctc                                                                    <  1:250109/100‑1 (MQ=255)
                      gttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGctc                                                                    <  2:841733/100‑1 (MQ=255)
                        tGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACTCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCtt                                                                  >  1:3006910/1‑100 (MQ=255)
                          aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGTAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                <  2:414784/100‑1 (MQ=255)
                           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               <  2:2553566/100‑1 (MQ=255)
                           agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               >  1:3327067/1‑100 (MQ=255)
                            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              <  1:2494432/100‑1 (MQ=255)
                            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              <  2:3764124/100‑1 (MQ=255)
                            gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              >  2:2141667/1‑100 (MQ=255)
                              gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:3645397/1‑100 (MQ=255)
                              gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            <  1:3911060/100‑1 (MQ=255)
                              gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:292828/1‑100 (MQ=255)
                               aaaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAt                                                           <  2:2360471/100‑1 (MQ=255)
                                aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAAtt                                                          >  1:3770614/1‑100 (MQ=255)
                                aaaaTCCTGAAATTAAGGGTTGACTATGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAATGCGCTACAGAGAGTCGCAACTGATCTTTAACAAtt                                                          >  1:1563742/1‑100 (MQ=14)
                                  aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                        >  2:4258375/1‑100 (MQ=255)
                                   aTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAt                                                       <  2:3815862/100‑1 (MQ=255)
                                    tCCTGAAATTCAGGGTTGCCTCTGAAAGAGGAACGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      <  1:2544582/100‑1 (MQ=255)
                                     ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  1:517698/100‑1 (MQ=255)
                                      cTGAAATTCCGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTACAGTGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:2015714/1‑100 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATc                                                      <  2:3690404/98‑1 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  1:4182703/100‑1 (MQ=255)
                                      cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  2:1840013/1‑100 (MQ=255)
                                         aaaTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACa                                                 >  2:910452/1‑100 (MQ=255)
                                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               <  2:677949/100‑1 (MQ=255)
                                           aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               >  2:3976930/1‑100 (MQ=255)
                                              cAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCGACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtg                                            >  1:2291536/1‑100 (MQ=255)
                                               aGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgt                                           >  2:2116319/1‑100 (MQ=255)
                                                gggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtg                                          >  1:1154460/1‑100 (MQ=255)
                                                 ggTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgt                                         >  2:1428117/1‑100 (MQ=255)
                                                  gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                        >  2:3543300/1‑100 (MQ=255)
                                                    tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                      >  2:1214517/1‑100 (MQ=255)
                                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    >  2:2963335/1‑100 (MQ=255)
                                                      aCTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    >  2:2165989/1‑100 (MQ=255)
                                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                   >  1:2912214/1‑100 (MQ=255)
                                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                   >  1:3927212/1‑100 (MQ=255)
                                                       ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCAc                                   >  2:1059676/1‑100 (MQ=255)
                                                         ctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTc                                 >  2:148288/1‑100 (MQ=255)
                                                          tGAAAGAGGAAAGCGTAATATACGACACCTCGCGAAAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg                                >  1:1198987/1‑100 (MQ=255)
                                                           gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                               >  1:1656384/1‑100 (MQ=255)
                                                             aaGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                             <  1:697690/100‑1 (MQ=255)
                                                              agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            >  1:3630035/1‑100 (MQ=255)
                                                                 ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                         >  2:751113/1‑100 (MQ=255)
                                                                 ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                         >  2:167878/1‑100 (MQ=255)
                                                                  gAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACg                        >  1:816466/1‑100 (MQ=255)
                                                                  gAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACg                        <  2:3157668/100‑1 (MQ=255)
                                                                    aaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                      >  2:3373151/1‑100 (MQ=255)
                                                                    aaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGa                      <  2:3115077/100‑1 (MQ=255)
                                                                     aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  1:1259394/100‑1 (MQ=255)
                                                                      gCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGGGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAtt                    <  1:2578290/100‑1 (MQ=255)
                                                                      gCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAtt                    >  2:2045345/1‑100 (MQ=255)
                                                                      gCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAtt                    <  1:548041/100‑1 (MQ=255)
                                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  >  1:1390475/1‑100 (MQ=255)
                                                                        gTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCt                  <  2:901047/100‑1 (MQ=255)
                                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAATCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                 >  1:2121834/1‑100 (MQ=255)
                                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                 <  1:3242230/100‑1 (MQ=255)
                                                                         tAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGATCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                 >  1:2368657/1‑100 (MQ=255)
                                                                         tAATATACGACACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCtt                 >  1:3255651/1‑100 (MQ=255)
                                                                          tccgatctccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                <  2:3001860/92‑1 (MQ=255)
                                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                <  2:545100/100‑1 (MQ=255)
                                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                <  1:2665109/100‑1 (MQ=255)
                                                                          aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                <  1:3639644/100‑1 (MQ=255)
                                                                            tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  2:1915803/100‑1 (MQ=255)
                                                                              taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              >  1:2413454/1‑98 (MQ=255)
                                                                              taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt            >  2:3345632/1‑100 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        >  2:1388598/1‑100 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        >  1:3816516/1‑100 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  1:3201522/100‑1 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  2:2503695/100‑1 (MQ=255)
                                                                                  ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        <  1:59817/100‑1 (MQ=255)
                                                                                      cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    <  2:2012064/100‑1 (MQ=255)
                                                                                      cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    <  1:348472/100‑1 (MQ=255)
                                                                                      cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    >  2:1854950/1‑100 (MQ=255)
                                                                                       tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg   >  2:1287882/1‑100 (MQ=255)
                                                                                       tCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACg   >  1:2720231/1‑100 (MQ=255)
                                                                                        cgcgACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGa  >  1:1337192/1‑100 (MQ=255)
                                                                                        |                                                                                                   
CTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207886‑4208073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.