BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1294420 =	NA (NA)	9 (0.060)	5/168	NT	NA	intergenic (+276/+6)	tdk/insZ	thymidine kinase/deoxyuridine kinase/pseudogene, transposase homolog
*	?	NC_000913	1294445 =	NA (NA)	9 (0.060)	5/168	NT	NA	noncoding (961/980 nt)	ISZ	repeat region

Only 100 of 190 total aligned reads displayed.

TGATGAAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGA  >  NC_000913/1294346‑1294543

tgatgcAGGCTCATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGGGCGGCAc                                                                                                    <  1:517824/100‑1 (MQ=255)

  atgaAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTa                                                                                                  >  2:1560760/1‑100 (MQ=255)

   acaaaacgcccccgaccatcaaggccgaggtcggttaagatatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCACTAt                                                                                                 >  1:1415616‑M1/72‑100 (MQ=255)

    gaAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATg                                                                                                >  2:903147/1‑100 (MQ=255)

    caaaacgcccccgaccatcaaggccgaggtcggttaagatatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCACTATg                                                                                                >  2:4269710‑M1/71‑100 (MQ=255)

     aaGGCTAATGCTGTCGGTTTATCGAAAAGTTTCTTTGTGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGt                                                                                               <  1:2888789/100‑1 (MQ=255)

      aGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGtt                                                                                              <  2:851697/100‑1 (MQ=255)

       ggCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGttt                                                                                             >  1:1774194/1‑100 (MQ=255)

          tAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTcac                                                                                          >  1:737231/1‑100 (MQ=255)

             tGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAgg                                                                                       <  2:687220/100‑1 (MQ=255)

             tGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAgg                                                                                       <  1:2286334/100‑1 (MQ=255)

             cccgaccatcaaggccgaggtcggttaagatatcaaaaacccgttatcctgtgaaacatagTGCCGTTCACTTAAGAGGAGCGGCACTATGTTTcac                                                                                          >  1:3321689‑M1/62‑97 (MQ=255)

              gCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGa                                                                                      >  1:1340377/1‑100 (MQ=255)

               cTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGAt                                                                                     >  2:3782147/1‑100 (MQ=255)

                   cGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTAACTTAAGAGTAGCGGCACTATGTTTCACAGGATAACg                                                                                 <  1:154905/100‑1 (MQ=255)

                    ggTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACgg                                                                                >  1:3555617/1‑100 (MQ=255)

                     gTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACggg                                                                               >  1:142176/1‑100 (MQ=255)

                      tttATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGt                                                                              >  1:1072391/1‑100 (MQ=255)

                         cgatctaaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGtttt                                                                           <  1:1180247/94‑1 (MQ=255)

                         aTGGAAAAGTTGCTTTGAGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACGGGATAACGGGtttt                                                                           <  1:1877022/100‑1 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGttttt                                                                          <  2:3999497/100‑1 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGttttt                                                                          >  2:141116/1‑100 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGttttt                                                                          >  1:1619833/1‑100 (MQ=255)

                          tGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAAAGGAGAGGCACTATGTTTCACAGGATAACGGGttttt                                                                          >  1:2879197/1‑100 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         >  2:1034447/1‑100 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  2:3606519/100‑1 (MQ=255)

                           ggAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  2:3598312/100‑1 (MQ=255)

                           ggAAAAGTTGCCTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTg                                                                         <  1:3913511/100‑1 (MQ=255)

                             aaaaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGat                                                                       <  1:226025/100‑1 (MQ=255)

                               aaGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTAGatcg                                                                     >  2:1180250/1‑98 (MQ=255)

                                 gTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCt                                                                   >  2:3257419/1‑100 (MQ=255)

                                   tGCTTTGGATAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTa                                                                 <  1:2394032/100‑1 (MQ=255)

                                    gCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTaa                                                                <  2:4029315/100‑1 (MQ=255)

                                     cTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAAc                                                               >  2:2338584/1‑100 (MQ=255)

                                      tttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAAcc                                                              >  2:1810179/1‑100 (MQ=255)

                                       ttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCg                                                             >  1:36171/1‑100 (MQ=255)

                                       ttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCg                                                             >  2:1527264/1‑100 (MQ=255)

                                       ttGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCg                                                             <  2:2376753/100‑1 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGCTATCTTAACCGAc                                                           >  1:180485/1‑99 (MQ=255)

                                          ggTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGAcc                                                          >  2:2023915/1‑100 (MQ=255)

                                           gTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCt                                                         >  1:1605980/1‑100 (MQ=255)

                                           gTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCt                                                         >  1:648160/1‑100 (MQ=255)

                                           gTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCt                                                         >  1:949706/1‑100 (MQ=255)

                                             aaaaaaaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAAcc                                                              <  1:2543816/93‑1 (MQ=255)

                                              aaCAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCgg                                                      >  2:1805940/1‑100 (MQ=255)

                                                cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                    <  2:2568496/100‑1 (MQ=255)

                                                cAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGcc                                                    >  2:1225079/1‑100 (MQ=255)

                                                aaaaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATGACGGGTTGTTGATATCGTAACCGACCTCgg                                                      >  1:4055009/2‑98 (MQ=255)

                                                 aaaaaaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCt                                                   >  2:60621/1‑100 (MQ=255)

                                                     aaTACGGCCCCAGAAGGGCAATGCTGTTTATTTTAGTGGTGCGGCACTATGTTTCACAGGATAACGGGTTTTGGATATCTTAACCGACCTCGGCCTTGAt                                               <  2:222690/100‑1 (MQ=255)

                                                     aaTACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGAt                                               <  2:482790/100‑1 (MQ=255)

                                                           gCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgg                                         <  2:933186/100‑1 (MQ=255)

                                                           gCCCCAGAAGGGAAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgg                                         >  2:2814900/1‑100 (MQ=255)

                                                            ccccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggn                                        <  1:275509/100‑2 (MQ=255)

                                                            ccccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCg                                          >  1:3512604/1‑98 (MQ=255)

                                                             cccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCgggg                                       <  2:1966798/100‑1 (MQ=255)

                                                              ccAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCggggg                                      >  2:1374248/1‑100 (MQ=255)

                                                                 gAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGt                                   >  1:99525/1‑100 (MQ=255)

                                                                    acatagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGtttt                                >  2:2149757‑M2/32‑100 (MQ=255)

                                                                     ggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTg                               >  1:3648810/1‑100 (MQ=255)

                                                                     ggCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGCCGGGGGCGTTTTg                               <  2:2870550/100‑1 (MQ=255)

                                                                     catagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGtttt                                >  2:3615706‑M2/31‑99 (MQ=255)

                                                                     catagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTg                               >  2:4045395‑M2/31‑100 (MQ=255)

                                                                     catagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTg                               >  2:219590‑M2/31‑100 (MQ=255)

                                                                      gCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                              >  2:349731/1‑100 (MQ=255)

                                                                      atagtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                              >  2:1046343‑M2/30‑100 (MQ=255)

                                                                       cAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGtt                             >  2:3270452/1‑100 (MQ=255)

                                                                       cAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGt                              <  1:3110958/99‑1 (MQ=255)

                                                                        agtgccgctcctcttaagtgaacggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTa                            >  1:294698‑M2/28‑100 (MQ=255)

                                                                          TGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATg                          >  2:2117487‑M1/1‑100 (MQ=255)

                                                                           GCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGa                         >  1:896819‑M1/1‑100 (MQ=255)

                                                                           GCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGa                         >  2:243118‑M1/1‑100 (MQ=255)

                                                                               ttCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAacac                     <  2:482344/100‑1 (MQ=255)

                                                                                tCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacc                    <  2:4190752/100‑1 (MQ=255)

                                                                                cttccgatctggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacc                    <  2:3897167/90‑1 (MQ=255)

                                                                                 cACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAAcacca                   >  2:225171/1‑100 (MQ=255)

                                                                                   cTTAAGAGGGGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTATCCCCCATCGGCCTTGATGGTCGAGGGCGCTTTACTATGATctccac                  >  1:556903/1‑99 (MQ=255)

                                                                                   cTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTTTTTTTTTTTTCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACt                 >  1:103066/1‑100 (MQ=255)

                                                                                    ttAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACtt                >  2:2193515/1‑100 (MQ=255)

                                                                                      aaGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTcc              <  2:1774198/100‑1 (MQ=255)

                                                                                      aaGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTcc              >  1:2472191/1‑100 (MQ=255)

                                                                                        ctggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCag            <  2:3073864/98‑1 (MQ=255)

                                                                                          ggagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCagag          >  2:948932/1‑100 (MQ=255)

                                                                                           gagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGc         <  1:3409555/100‑1 (MQ=255)

                                                                                           gagCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGc         <  1:3066262/100‑1 (MQ=255)

                                                                                            agCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCa        <  1:3270440/100‑1 (MQ=255)

                                                                                            agCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCa        >  2:2379483/1‑100 (MQ=255)

                                                                                            agCGGCACTATGTCTCACAGGATGACGGGTGTTTGATAGCTTATCCGACCTCGGCCTCGATGGTCGGGGGCGTTTTGTTATGAACACCACTTcc              <  1:3749758/94‑1 (MQ=255)

                                                                                             gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc       >  2:956341/1‑100 (MQ=255)

                                                                                             gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc       <  2:3532907/100‑1 (MQ=255)

                                                                                             gCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAc       >  2:1870492/1‑100 (MQ=255)

                                                                                             gCGGCACTATGTGTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTTATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCa        <  1:2377754/99‑1 (MQ=255)

                                                                                               ggcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAccc     >  2:2098105‑M2/5‑100 (MQ=255)

                                                                                                gcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAcccc    <  1:3996417‑M2/97‑1 (MQ=255)

                                                                                                gcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAcccc    <  1:4110295‑M2/97‑1 (MQ=255)

                                                                                                gcaCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAcccc    <  1:3849073‑M2/97‑1 (MQ=255)

                                                                                                 caCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCAcccc    <  1:2107452‑M2/97‑1 (MQ=255)

                                                                                                 caCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCg   <  2:74773‑M2/98‑1 (MQ=255)

                                                                                                 caCTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCg   <  2:2430488‑M2/98‑1 (MQ=255)

                                                                                                  aCTATGTTTCACAGGATAACGGGTTTTTTTTTTTTTTACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGa  >  1:4236769‑M2/2‑100 (MQ=255)

TGATGAAGGCTAATGCTGTCGGTTTATGGAAAAGTTGCTTTGGGTAAACAAAAAATACGGCCCCAGAAGGGCAATGCCGTTCACTTAAGAGGAGCGGCACTATGTTTCACAGGATAACGGGTTTTTGATATCTTAACCGACCTCGGCCTTGATGGTCGGGGGCGTTTTGTTATGAACACCACTTCCAGAGCACCCCGA  >  NC_000913/1294346‑1294543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.