BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1382894	NA (NA)	6 (0.040)	5/164	NT	NA	noncoding (28/74 nt)	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 1382910	NA (NA)	6 (0.040)	5/164	NT	NA	noncoding (44/74 nt)	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 148 total aligned reads displayed.

AATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACG  >  NC_000913/1382812‑1383009

  ttCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCcgg                                                                                                  >  2:2066630‑M2/1‑97 (MQ=255)

    ccATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCcggat                                                                                                >  2:3646095‑M2/1‑95 (MQ=255)

      aTTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCcggata                                                                                               >  1:3047275‑M2/1‑93 (MQ=255)

      aTTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCcggata                                                                                               >  1:2094057‑M2/1‑93 (MQ=255)

       ttATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAg                                                                                             <  1:71422/100‑1 (MQ=255)

        tATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGa                                                                                            >  2:165882/1‑100 (MQ=255)

           gCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATgc                                                                                         >  2:2445932/1‑100 (MQ=255)

           gCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATgc                                                                                         <  1:3286901/100‑1 (MQ=255)

            cAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATgcg                                                                                        >  1:2733538/1‑100 (MQ=255)

            cAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCAGAtgcgatgct                                                                                        <  2:583931/100‑9 (MQ=255)

              ggTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCt                                                                                      >  2:896376/1‑100 (MQ=255)

              ggTATCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCt                                                                                      >  2:4195617/1‑100 (MQ=255)

               gtgtCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTa                                                                                     >  1:1669260/1‑100 (MQ=255)

                tgtCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAg                                                                                    >  1:3127023/1‑100 (MQ=255)

                 gtCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAgc                                                                                   >  2:2347584/1‑100 (MQ=255)

                  tCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAgca                                                                                  >  2:444054/1‑100 (MQ=255)

                    ggCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAgcatc                                                                                <  1:1032530/100‑1 (MQ=255)

                     gCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAgcatcg                                                                               <  2:3581946/100‑1 (MQ=255)

                        tAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAgcatcgcat                                                                            >  1:893121/1‑100 (MQ=255)

                           nttACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTg                                                                         >  2:235090/2‑100 (MQ=255)

                            ttACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTgg                                                                        <  1:2973111/100‑1 (MQ=255)

                            ttACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTgg                                                                        <  1:2521495/100‑1 (MQ=255)

                              aCTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCa                                                                      >  2:4057074/1‑100 (MQ=255)

                                 cGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTc                                                                   >  1:1493034/1‑100 (MQ=255)

                                 cGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTc                                                                   <  2:2712513/100‑1 (MQ=255)

                                  gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                  >  2:185003/1‑100 (MQ=255)

                                    tCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAgg                                                                <  1:2134275/100‑1 (MQ=255)

                                    tCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAgg                                                                <  1:1759496/100‑1 (MQ=255)

                                     cTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGc                                                               >  2:3370636/1‑100 (MQ=255)

                                      tGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCa                                                              >  1:531853/1‑100 (MQ=255)

                                      tGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCa                                                              <  2:1153768/100‑1 (MQ=255)

                                      tGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCa                                                              >  1:1655184/1‑100 (MQ=255)

                                       gATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCaa                                                             >  2:2384569/1‑100 (MQ=255)

                                        aTAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAg                                                            >  1:3003408/1‑100 (MQ=255)

                                         tAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAgg                                                           <  2:1282156/100‑1 (MQ=255)

                                         tAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAgg                                                           <  2:2438416/100‑1 (MQ=255)

                                          aaTGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGt                                                          >  2:4030376/1‑100 (MQ=255)

                                           accagctaccttGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTa                                                         <  2:2102472/90‑1 (MQ=255)

                                           aTGGGCTAAATTTCCGGATGCGGCGCTAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTa                                                         <  1:1029399/100‑1 (MQ=255)

                                            tGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAg                                                        >  1:909338/1‑100 (MQ=255)

                                             gggCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGc                                                       <  1:3767629/100‑1 (MQ=255)

                                              ggCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCt                                                      >  1:2217562/1‑100 (MQ=255)

                                               gCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTg                                                     <  2:1467644/100‑1 (MQ=255)

                                               gCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTg                                                     <  2:1837444/100‑1 (MQ=255)

                                               gCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTg                                                     <  1:3960973/100‑1 (MQ=255)

                                                cTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATACGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTgg                                                    >  1:3369337/1‑100 (MQ=255)

                                                cTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTgg                                                    >  1:1218748/1‑100 (MQ=255)

                                                cTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTgg                                                    >  1:2296703/1‑100 (MQ=255)

                                                  aaaTTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGta                                                  >  1:1465805/1‑100 (MQ=255)

                                                  aaaTTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGta                                                  <  2:1583785/100‑1 (MQ=255)

                                                        ccGGATGCGGCGCTAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtatttatt                                            <  2:745947/100‑1 (MQ=255)

                                                        ccGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtatttatt                                            <  2:1041723/100‑1 (MQ=255)

                                                        ccGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtatttatt                                            >  2:1769811/1‑100 (MQ=255)

                                                        ccGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtatttatt                                            <  1:517754/100‑1 (MQ=255)

                                                          gggtGCGGCGGGAGGAGTTTATCCGATCTATAAATGTAGGCCGGAGAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtat                                                 <  1:4073717/90‑1 (MQ=255)

                                                          ggATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTc                                          >  1:1002824/1‑100 (MQ=255)

                                                          ggATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTc                                          >  2:3430892/1‑100 (MQ=255)

                                                              gcggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                      <  2:3971692/100‑1 (MQ=255)

                                                              gcggcgCGAGTACTTTATCCGATCAATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                      <  2:313376/100‑1 (MQ=255)

                                                               cggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGt                                     <  2:3845520/100‑1 (MQ=255)

                                                               cggcgCGAGTACTTTATCCGAGCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                      <  1:1235823/99‑1 (MQ=255)

                                                                ggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTc                                    <  2:3975393/100‑1 (MQ=255)

                                                                ggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTc                                    >  1:3097976/1‑100 (MQ=255)

                                                                ggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCACGCAAGGTAGCTGGTATTTATTTCAGCGTc                                    >  1:1128940/1‑100 (MQ=255)

                                                                 gcgcGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCa                                   >  2:3800311/1‑100 (MQ=255)

                                                                  cgcgAGTACTTTATCCGATCTATAAATGTAGGCcggataaagtactcgcgccgcatccggcaatttagcccattatcagaacgagtaatttacgccgaca                                  <  1:1273907‑M2/100‑68 (MQ=255)

                                                                  cgcgAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCat                                  >  2:3491393/1‑100 (MQ=255)

                                                                    cgAGTACTTTATCCGATCTATAAATGTAGGCcggataaagtactcgcgccgcatccggcaatttagcccattatcagaacgagtaatttacgccgacacc                                <  1:753483‑M2/100‑70 (MQ=255)

                                                                    cgAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCatat                                >  2:2419327/1‑100 (MQ=255)

                                                                    cgAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCatat                                <  2:876774/100‑1 (MQ=255)

                                                                        tACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGt                            >  2:3355991/1‑100 (MQ=255)

                                                                         tgctcttCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTg                           <  2:706241/94‑1 (MQ=255)

                                                                         aCTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTg                           >  1:152932/1‑100 (MQ=255)

                                                                         aCTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGCCAAGGAAGCTGGTAGTTATTTCAGCGTCATATGCGTg                           >  1:2877344/1‑100 (MQ=255)

                                                                          cTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTgg                          >  1:66995/1‑100 (MQ=255)

                                                                              aTCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAAc                      <  1:3675649/100‑1 (MQ=255)

                                                                                ccGATCTATAAATGTAGGGCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGGAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACgg                    <  1:2639814/100‑1 (MQ=255)

                                                                                ccGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACgg                    <  2:616223/100‑1 (MQ=255)

                                                                                 cGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGTATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGt                   <  1:499538/100‑1 (MQ=255)

                                                                                 cGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGt                   >  1:3145940/1‑100 (MQ=255)

                                                                                 cGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGt                   >  2:376277/1‑100 (MQ=255)

                                                                                  gATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTa                  >  1:375719/1‑100 (MQ=255)

                                                                                  gATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTa                  >  1:334220/1‑100 (MQ=255)

                                                                                     cTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAata               <  2:2054162/100‑1 (MQ=255)

                                                                                      tataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAatat              >  2:3752034/1‑100 (MQ=255)

                                                                                       ataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATAtt             >  2:1403366/1‑100 (MQ=255)

                                                                                        taAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTc            <  1:2906/100‑1 (MQ=255)

                                                                                           aTGTAGGCCGGATAAGATGCGCTAGCATCGTATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTGCAGCGTCATATGCGTGGCAACGGTAATATTCtg          <  1:4031865/99‑1 (MQ=255)

                                                                                            tGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCtgtg        >  1:268455/1‑100 (MQ=255)

                                                                                            tGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCtgtg        <  1:1085154/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  1:2679487/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  1:3218780/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  2:2870575/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  2:292907/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  1:1912896/100‑1 (MQ=255)

                                                                                             gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg       <  2:3152379/100‑1 (MQ=255)

                                                                                               aGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtggtg     <  2:2640013/100‑1 (MQ=255)

                                                                                                 gCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTTAc   <  2:2108683/100‑1 (MQ=255)

                                                                                                 gCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGAc   >  2:1567759/1‑100 (MQ=255)

                                                                                                  ccGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACg  >  2:3214509/1‑100 (MQ=255)

AATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACG  >  NC_000913/1382812‑1383009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.