Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 4,242,942 Δ66 bp 100% coding (510‑575/891 nt) malG ← maltose transporter subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4242942 4243007 66 168 [0] [4] 172 malG maltose transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42429410 (0.000)145 (1.020) 88/164 NT 99.7% coding (576/891 nt) malG maltose transporter subunit
?NC_000913 4243008 = 1 (0.010)coding (509/891 nt) malG maltose transporter subunit

Only 100 of 168 total aligned reads displayed.

AGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGC  >  NC_000913/4242842‑4243035
                                                                                                   |                                                                                              
aGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA                                                                                                >  1:255838‑M1/1‑100 (MQ=255)
   gATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatc                                                                                             <  2:1713755‑M1/100‑4 (MQ=255)
   gATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatc                                                                                             >  2:3644049‑M1/1‑97 (MQ=255)
    aTAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcc                                                                                            <  1:517017‑M1/100‑5 (MQ=255)
     tAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatccc                                                                                           >  1:3068124‑M1/1‑95 (MQ=255)
     tAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatccc                                                                                           >  1:1648841‑M1/1‑95 (MQ=255)
        aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc                                                                                        <  1:1421427‑M1/100‑9 (MQ=255)
        aCGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacc                                                                                        >  2:2042975‑M1/1‑92 (MQ=255)
         cGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccaccc                                                                                       >  2:419465‑M1/1‑91 (MQ=255)
         cGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccaccc                                                                                       >  2:3399111‑M1/1‑91 (MQ=255)
             aGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagat                                                                                   <  2:2423025‑M1/100‑14 (MQ=255)
             aGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagat                                                                                   >  2:2301771‑M1/1‑87 (MQ=255)
             aGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagat                                                                                   <  2:2496071‑M1/100‑14 (MQ=255)
              ggATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagata                                                                                  <  2:19638‑M1/100‑15 (MQ=255)
              ggATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagata                                                                                  >  2:1692324‑M1/1‑86 (MQ=255)
               gATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatac                                                                                 >  2:3239165‑M1/1‑85 (MQ=255)
                 tGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc                                                                               <  1:3902434‑M1/100‑18 (MQ=255)
                 tGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgc                                                                               <  2:2742998‑M1/100‑18 (MQ=255)
                  gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcg                                                                              <  1:2744048‑M1/100‑19 (MQ=255)
                  gAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCGGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcg                                                                              <  2:1247449‑M1/100‑19 (MQ=255)
                     tACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatgccgcccagatacgcg                                                                              >  1:3536340‑M1/1‑79 (MQ=255)
                      accaccGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaa                                                                          <  2:689782‑M1/100‑23 (MQ=255)
                      accaccGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaa                                                                          >  2:3991667‑M1/1‑78 (MQ=255)
                           cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg                                                                     <  2:2700708‑M1/100‑28 (MQ=255)
                           cGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacg                                                                     <  1:574941‑M1/100‑28 (MQ=255)
                            gCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgc                                                                    <  2:2904576‑M1/100‑29 (MQ=255)
                            gCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgc                                                                    >  1:1377301‑M1/1‑72 (MQ=255)
                              cAGAATCGGTACTGACAGCGGCAACAGGACAGGGCGGAAGGCATGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccg                                                                  >  2:2882807‑M1/1‑70 (MQ=255)
                               aGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgc                                                                 >  2:1492315‑M1/1‑69 (MQ=255)
                                  gatcttactgaCAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgt                                                              <  1:3596266‑M1/95‑35 (MQ=255)
                                   tCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtg                                                             <  1:1413274‑M1/100‑36 (MQ=255)
                                    cgttactGACAGCGGCAACAGCACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCGatcccacccagatacgcgaaaattacgccgccgt                                                              <  1:4182267‑M1/95‑35 (MQ=255)
                                     ggTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgag                                                           >  1:1520599‑M1/1‑63 (MQ=255)
                                     ggTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgag                                                           <  1:1939109‑M1/100‑38 (MQ=255)
                                     ggTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgag                                                           >  2:2552067‑M1/1‑63 (MQ=255)
                                      gTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgag                                                           <  2:3219308‑M1/99‑38 (MQ=255)
                                       tACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagta                                                         >  1:262571‑M1/1‑61 (MQ=255)
                                       tACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCCCACCATCCAGCGCAatcccacccagctacgcgcaagtaacgccgccctgcgaa                                                         >  1:651376‑M1/1‑61 (MQ=255)
                                         ctcacagCGGCAACCGGACAAGGCGGAATGCCTGCCACGGTGTCTCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtatt                                                       <  1:3954587‑M1/97‑42 (MQ=255)
                                         cTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtga                                                            >  1:2433063‑M1/1‑59 (MQ=255)
                                          tGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattc                                                      <  1:1570313‑M1/100‑43 (MQ=255)
                                          tGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattc                                                      >  1:853972‑M1/1‑58 (MQ=255)
                                           gACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgaggattc                                                      >  1:540974‑M1/1‑57 (MQ=255)
                                            aCAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcag                                                    <  2:3641590‑M1/100‑45 (MQ=255)
                                             cAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcagg                                                   <  1:3366632‑M1/100‑46 (MQ=255)
                                              aGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggc                                                  <  2:1853975‑M1/100‑47 (MQ=255)
                                              aGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggc                                                  >  1:1307790‑M1/1‑54 (MQ=255)
                                              aGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTCTCGTACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcagg                                                   <  1:1794131‑M1/99‑46 (MQ=255)
                                              aGCGGAAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggc                                                  <  1:156786‑M1/100‑47 (MQ=255)
                                               gCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                 <  1:2532914‑M1/100‑48 (MQ=255)
                                                cGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcca                                                >  2:3303338‑M1/1‑52 (MQ=255)
                                                cGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcca                                                >  2:4239644‑M1/1‑52 (MQ=255)
                                                cGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcca                                                >  2:4183215‑M1/1‑52 (MQ=255)
                                                cGGAAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcca                                                <  2:2478227‑M1/100‑49 (MQ=255)
                                                 ggCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcc                                                 <  1:2467045‑M1/98‑48 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcccat                                              >  2:3189402‑M1/1‑50 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaat                                              >  2:160364‑M1/1‑50 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaat                                              <  2:207898‑M1/100‑51 (MQ=255)
                                                  gCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaat                                              <  1:1723446‑M1/100‑51 (MQ=255)
                                                    aaCAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgcgtattcaggcc                                                 >  1:2963899‑M1/1‑48 (MQ=255)
                                                       aGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatg                                         <  2:3452103‑M1/100‑56 (MQ=255)
                                                       aGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatg                                         <  2:492952‑M1/100‑56 (MQ=255)
                                                       aGGACAAGGCGGAAAGCCTGCCACGGTGGCGCAACATCCAGCGAAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggcaaatgaatg                                         <  1:74076‑M1/100‑56 (MQ=255)
                                                        ggACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgg                                        >  2:88773‑M1/1‑44 (MQ=255)
                                                          aCAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaa                                      >  2:2007791‑M1/1‑42 (MQ=255)
                                                          aCAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAaacccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaa                                      <  2:1588956‑M1/100‑59 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                     <  2:678749‑M1/100‑60 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                     <  1:2077525‑M1/100‑60 (MQ=255)
                                                           cAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaat                                     >  2:822344‑M1/1‑41 (MQ=255)
                                                            aaGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatg                                    <  1:980502‑M1/100‑61 (MQ=255)
                                                             aGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccttgagtatgcaggccaaagaatggaa                                      >  1:3419353‑M1/1‑39 (MQ=255)
                                                             aGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatgggatgt                                   >  1:2926381‑M1/1‑39 (MQ=255)
                                                               gCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtac                                 <  1:4056684‑M1/100‑64 (MQ=255)
                                                                 ggAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatggatggaatgtactc                               <  1:1127769‑M1/100‑66 (MQ=255)
                                                                 ggAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactc                               <  2:3999775‑M1/100‑66 (MQ=255)
                                                                 ggAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactc                               >  2:128898‑M1/1‑35 (MQ=255)
                                                                   aaGGCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcac                             >  1:1243750‑M1/1‑33 (MQ=255)
                                                                     ggCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacgcagatacgcgaaaattacgtcgccgtgagtattcaggccaatgaatggaatgtactcaccc                           <  1:2329112‑M1/100‑70 (MQ=255)
                                                                     ggCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccc                           <  2:3010721‑M1/100‑70 (MQ=255)
                                                                      gCCTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcaccca                          >  2:46071‑M1/1‑30 (MQ=255)
                                                                       ccTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaacattacgccgccgtgagtattcaggccaatgaatggaatgtacccaccca                          >  1:411661‑M1/1‑29 (MQ=255)
                                                                       ccTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccag                         >  1:1035697‑M1/1‑29 (MQ=255)
                                                                        cTGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccaga                        >  2:715438‑M1/1‑28 (MQ=255)
                                                                         tGCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaacattacgccgccgtgagtattcgagccaatgcatggaatgtactcacc                            >  1:2693574‑M1/1‑27 (MQ=255)
                                                                          gCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacg                      >  2:324197‑M1/1‑26 (MQ=255)
                                                                          gCCACGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacg                      >  1:212485‑M1/1‑26 (MQ=255)
                                                                             aCGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatc                   <  2:3580467‑M1/100‑78 (MQ=255)
                                                                              cGGTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatca                  <  1:3152576‑M1/100‑79 (MQ=255)
                                                                               ggTGTCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaa                 <  2:2351197‑M1/100‑80 (MQ=255)
                                                                                 tgtCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaac               <  2:3865479‑M1/100‑82 (MQ=255)
                                                                                   tCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaa             <  1:2424510‑M1/100‑84 (MQ=255)
                                                                                   tCGCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaaagcaaggaatgtactcacccagacgatcaaacaa             >  1:3524150‑M1/1‑17 (MQ=255)
                                                                                     gCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacg           >  2:1371752‑M1/1‑15 (MQ=255)
                                                                                     gCACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatagatcggaa           >  2:1716154‑M1/1‑15 (MQ=255)
                                                                                      cACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgc          >  2:4115917‑M1/1‑14 (MQ=255)
                                                                                      cACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgc          <  2:2095740‑M1/100‑87 (MQ=255)
                                                                                      cACCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgc          <  2:212486‑M1/100‑87 (MQ=255)
                                                                                       aCCATCCAGCGCAatcccacccagatacgcgaaaattacgccgccgcgcgtattcaggccaatgaatggaatgtacacacccagacgatcaaacaacg           >  1:324430‑M1/1‑13 (MQ=255)
                                                                                            ccAGCGCAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaa    >  1:1010317‑M1/1‑8 (MQ=255)
                                                                                               gcgcAatcccacccagatacgcgaaaattacgccgccgtgagtattcaggccaatgaatggaatgtactcacccagacgatcaaacaacgcatacaacg  >  1:2053248‑M1/1‑5 (MQ=255)
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AGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGC  >  NC_000913/4242842‑4243035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑