Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 4,242,942 Δ66 bp 100% coding (510‑575/891 nt) malG ← maltose transporter subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4242942 4243007 66 168 [0] [4] 172 malG maltose transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42429410 (0.000)145 (1.020) 88/164 NT 99.7% coding (576/891 nt) malG maltose transporter subunit
?NC_000913 4243008 = 1 (0.010)coding (509/891 nt) malG maltose transporter subunit

Only 100 of 172 total aligned reads displayed.

AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA  >  NC_000913/4242909‑4243107
                                                                                                   |                                                                                                   
gcgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaa                                                                                                     >  2:1501018‑M2/100‑100 (MQ=255)
gcgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaa                                                                                                     >  2:3818480‑M2/100‑100 (MQ=255)
 cgataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaAt                                                                                                    >  2:3189447‑M2/99‑100 (MQ=255)
  gataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATc                                                                                                   <  1:971046‑M2/3‑1 (MQ=255)
  gataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATc                                                                                                   >  2:3644049‑M2/98‑100 (MQ=255)
   ataaacgacaggatgaataccaccgcgagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcc                                                                                                  <  1:674583‑M2/4‑1 (MQ=255)
   ataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcc                                                                                                  <  1:517017‑M2/4‑1 (MQ=255)
   ataaacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaagcctgccacggtgtcgcaccatccagcgcaATcc                                                                                                  >  2:2765934‑M2/97‑100 (MQ=255)
      aacgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccac                                                                                               >  1:3161667‑M2/94‑100 (MQ=255)
       acgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccacc                                                                                              <  2:1759706‑M2/8‑1 (MQ=255)
        cgacaggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATcccaccc                                                                                             >  2:419465‑M2/92‑100 (MQ=255)
            aggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGAt                                                                                         >  2:2301771‑M2/88‑100 (MQ=255)
            aggatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGAt                                                                                         >  2:2467135‑M2/88‑100 (MQ=255)
              gatgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAc                                                                                       >  2:3239165‑M2/86‑100 (MQ=255)
                tgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAcgc                                                                                     <  2:2742998‑M2/17‑1 (MQ=255)
                tgaataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATAcgc                                                                                     <  1:3902434‑M2/17‑1 (MQ=255)
                   ataccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaa                                                                                  >  2:2549041‑M2/81‑100 (MQ=255)
                    taccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATGCCGCCCAGATAcgcg                                                                                    >  1:3536340‑M2/80‑97 (MQ=255)
                     accaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaaaa                                                                                <  2:689782‑M2/22‑1 (MQ=255)
                      ccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGaaaa                                                                                >  1:2184705‑M2/78‑99 (MQ=255)
                      ccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAAt                                                                               >  2:3309476‑M2/78‑100 (MQ=255)
                      ccaccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAAt                                                                               >  2:3914254‑M2/78‑100 (MQ=255)
                         ccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAc                                                                            >  1:3412049‑M2/75‑100 (MQ=255)
                         ccgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAc                                                                            <  1:293635‑M2/26‑1 (MQ=255)
                          cgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcg                                                                           <  2:2700708‑M2/27‑1 (MQ=255)
                          cgccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAc                                                                            <  1:1613465‑M2/26‑1 (MQ=255)
                           gccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgc                                                                          >  1:1377301‑M2/73‑100 (MQ=255)
                            ccagaatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTAcgcc                                                                         <  2:4174488‑M2/29‑1 (MQ=255)
                                aatcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGccgccg                                                                     <  2:1280127‑M2/33‑1 (MQ=255)
                                 gatcttactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGt                                                                    <  1:3596266‑M2/34‑1 (MQ=255)
                                  tcggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTg                                                                   <  1:1413274‑M2/35‑1 (MQ=255)
                                    ggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAg                                                                 >  1:1520599‑M2/64‑100 (MQ=255)
                                    ggtactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAg                                                                 <  2:2033527‑M2/37‑1 (MQ=255)
                                      tactgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCcgccgtagatc                                                               >  2:3596280‑M2/62‑95 (MQ=255)
                                        ctgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGa                                                                  >  1:2433063‑M2/60‑95 (MQ=255)
                                        ctgacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTAtt                                                             <  1:586072‑M2/41‑1 (MQ=255)
                                          gacagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGGATTc                                                            >  1:540974‑M2/58‑99 (MQ=255)
                                            cagcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAgg                                                         <  1:3366632‑M2/45‑1 (MQ=255)
                                             agcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGc                                                        >  1:1307790‑M2/55‑100 (MQ=255)
                                             agcggcaacaggacaaggcggaaggcctgccacggtctcgtaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAgg                                                         <  1:1794131‑M2/45‑1 (MQ=255)
                                             agcggaaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGc                                                        <  1:156786‑M2/46‑1 (MQ=255)
                                              gcggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGcc                                                       <  1:2532914‑M2/47‑1 (MQ=255)
                                               cggcaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCa                                                      >  2:4239644‑M2/53‑100 (MQ=255)
                                               cggaaacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCa                                                      <  2:2478227‑M2/48‑1 (MQ=255)
                                                  caacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatg                                                   >  2:1700075‑M2/50‑100 (MQ=255)
                                                   aacaggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGCGTATTCAGGcc                                                       >  1:2963899‑M2/49‑95 (MQ=255)
                                                     caggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaat                                                >  2:289721‑M2/47‑100 (MQ=255)
                                                      aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg                                               <  2:3452103‑M2/55‑1 (MQ=255)
                                                      aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg                                               <  2:3226225‑M2/55‑1 (MQ=255)
                                                      aggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCaatgaatg                                               <  2:492952‑M2/55‑1 (MQ=255)
                                                      aggacaaggcggaaagcctgccacggtggcgcaacatccagcgaaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCAaatgaatg                                               <  1:74076‑M2/55‑1 (MQ=255)
                                                       ggacaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatgg                                              >  2:88773‑M2/45‑100 (MQ=255)
                                                         acaaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaa                                            >  2:2007791‑M2/43‑100 (MQ=255)
                                                         acaaggcggaaggcctgccacggtgtcgcaccatccagcgcaAACCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaa                                            <  2:1588956‑M2/58‑1 (MQ=255)
                                                          caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat                                           >  2:1607257‑M2/42‑100 (MQ=255)
                                                          caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat                                           >  2:822344‑M2/42‑100 (MQ=255)
                                                          caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat                                           <  2:678749‑M2/59‑1 (MQ=255)
                                                          caaggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATgaatggaat                                           <  1:2077525‑M2/59‑1 (MQ=255)
                                                            nggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAACgaatggaatg                                          >  2:1870203‑M2/40‑99 (MQ=255)
                                                            aggcgtaagacctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCTCCGCAAGTATTCAGGCCAATGAACGGAATGt                                         >  1:1916665‑M2/40‑100 (MQ=255)
                                                            aggcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGt                                         >  2:2071596‑M2/40‑100 (MQ=255)
                                                              gcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTAc                                       <  1:2437945‑M2/63‑1 (MQ=255)
                                                              gcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTAc                                       <  1:4271154‑M2/63‑1 (MQ=255)
                                                              gcggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTAc                                       <  1:4056684‑M2/63‑1 (MQ=255)
                                                               tCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAAATACGCCGCCGTGAGTCTTCAGGCCAAAGAATGGAATGTACt                                      >  1:1656171/1‑100 (MQ=255)
                                                                ggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGGATGGAATGTACTc                                     <  1:1127769‑M2/65‑1 (MQ=255)
                                                                ggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTc                                     >  2:128898‑M2/36‑100 (MQ=255)
                                                                ggaaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTc                                     <  2:3999775‑M2/65‑1 (MQ=255)
                                                                  aaggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAc                                   >  1:1243750‑M2/34‑100 (MQ=255)
                                                                   aggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAcc                                  >  2:29847‑M2/33‑100 (MQ=255)
                                                                    ggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAccc                                 <  2:3010721‑M2/69‑1 (MQ=255)
                                                                    ggcctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAccc                                 >  2:2606777‑M2/32‑100 (MQ=255)
                                                                      cttgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAg                               <  1:2583162‑M2/71‑1 (MQ=255)
                                                                      cctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAACATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTAcccaccca                                >  1:411661‑M2/30‑99 (MQ=255)
                                                                      cctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAg                               >  1:1035697‑M2/30‑100 (MQ=255)
                                                                       ctgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGa                              >  2:715438‑M2/29‑100 (MQ=255)
                                                                        tgccacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAACATTACGCCGCCGTGAGTATTCGAGCCAATGCATGGAATGTACTCAcc                                  >  1:2693574‑M2/28‑95 (MQ=255)
                                                                           cacggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGAt                          <  1:264163‑M2/76‑1 (MQ=255)
                                                                             cggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCa                        <  1:2042956‑M2/78‑1 (MQ=255)
                                                                             cggtgtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCa                        >  2:10137‑M2/23‑100 (MQ=255)
                                                                                tggcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaac                     <  1:3126159‑M2/81‑1 (MQ=255)
                                                                                 gtcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaaca                    <  1:3966310‑M2/82‑1 (MQ=255)
                                                                                 ggctcaccATACAGCGCAATCCCACCCACATACGCGAAAATTATGCCGCCCTTATTATTCACTCCAATGAATTCAATTTACTCACCCAGACGATCaaa                      <  1:1612469/91‑1 (MQ=255)
                                                                                  tcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAaacaa                   <  1:2424510‑M2/83‑1 (MQ=255)
                                                                                  tcgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAAAGCAAGGAATGTACTCACCCAGACGATCAaacaa                   >  1:3524150‑M2/18‑100 (MQ=255)
                                                                                   cgcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTCACTATTCAGGCCAATGAATGAAAAGTACACACCCAAACGAACAaacaac                  >  1:2086969‑M2/17‑100 (MQ=255)
                                                                                    gcaccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAcccagacgatagatcggaa                 >  2:1716154‑M2/16‑91 (MQ=255)
                                                                                     caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGc                <  2:212486‑M2/86‑1 (MQ=255)
                                                                                     caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGc                >  2:4115917‑M2/15‑100 (MQ=255)
                                                                                     caccatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGc                <  2:2095740‑M2/86‑1 (MQ=255)
                                                                                      accatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCa               >  2:3247166‑M2/14‑100 (MQ=255)
                                                                                      accatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCa               <  2:2370180‑M2/87‑1 (MQ=255)
                                                                                      accatccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCa               <  2:1418413‑M2/87‑1 (MQ=255)
                                                                                       ccATCCAGCGCCATCCCACCCAGATACGCGAAAATTCCGCCACCCTGACCATCCACGCCAACAAACGGAACATACCCACCCCGCCGATAAaaccccgc                >  1:3456539/2‑93 (MQ=255)
                                                                                         atccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAc            >  2:4266472‑M2/11‑100 (MQ=255)
                                                                                           ccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACaa          >  1:1010317‑M2/9‑100 (MQ=255)
                                                                                           ccagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACaa          >  2:3533835‑M2/9‑100 (MQ=255)
                                                                                             agcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTCCTCACCCAAACGATCAAACAACGCAt              >  1:1430683‑M2/7‑94 (MQ=255)
                                                                                                gcAATCCCACCCAGATACGCGAAAAGTACGCCGCGGTGAGTATTCAGTCCAATGACTACAAAGTACGCACCCATACGCTCAAACAACGAATACAAccc       >  1:1718513/1‑96 (MQ=255)
                                                                                                  aATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGACCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAcc   >  1:2900651‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                   
AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAGCAGCTTCTTCCAGCGAACTGTCGATGGTTTCGAAATAGCCTTTGATGGTCCAGACATGCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACCA  >  NC_000913/4242909‑4243107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑