| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,882,823 | IS5 (+) +4 bp | coding (1313‑1316/1509 nt) | casA ← | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 166 (1.790) | 82/198 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2882826 | 0 (0.000) | coding (1313/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
| * | ? | NC_000913 | 2882823 = | 0 (0.000) | 122 (1.320) | 78/198 | 0.0 | 100% | coding (1316/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | NC_000913 | = 3131340 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 261 total aligned reads displayed.
TGATGTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTT > NC_000913/2882724‑2882922 | tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct < 2:489840‑M1/1‑1 (MQ=255)tgatgTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTATCTCATCAGCCTGGGAAAAAt < 2:1433028/100‑1 (MQ=255) gattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt > 2:2145757‑M1/99‑100 (MQ=255) gatgTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAAtt > 2:1302274/1‑100 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa > 1:1166120‑M1/98‑100 (MQ=255) attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa > 1:1322966‑M1/98‑100 (MQ=255) attcaaggcatttacgggagaaaaaaacggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTa < 1:1422512‑M1/3‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccctcttattcgcaccttccTTaa < 2:2074286‑M1/4‑1 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTaa > 2:1985170‑M1/97‑100 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAc > 1:639739‑M1/96‑100 (MQ=255) gtgCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAg > 1:834071‑M2/1‑99 (MQ=255) cATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaa > 2:1669960‑M2/1‑96 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGcc < 1:88879‑M1/12‑1 (MQ=255) gAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcg < 1:1762590‑M2/100‑11 (MQ=255) gCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaa < 2:1688773‑M2/100‑13 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTa > 2:1163386‑M1/85‑100 (MQ=255) cTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaac > 2:2254676‑M2/1‑87 (MQ=255) cTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaac > 1:2305154‑M2/1‑87 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACAt < 2:375601‑M1/19‑1 (MQ=255) cAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaag > 2:288115‑M2/1‑84 (MQ=255) cAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaag < 1:660890‑M2/100‑17 (MQ=255) cAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaag < 2:846739‑M2/100‑17 (MQ=255) gattgattAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCCATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtc < 2:58303‑M2/100‑19 (MQ=255) attgattAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtcc < 2:823429‑M2/100‑20 (MQ=255) aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCggg < 2:228608‑M1/23‑1 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGa > 2:465103‑M1/77‑100 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGaa < 2:2120238‑M1/25‑1 (MQ=255) attAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctga < 1:632404‑M2/100‑24 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAAtt < 1:2143308‑M1/27‑1 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATtaa > 2:1068069‑M1/72‑100 (MQ=255) aaaTAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatat > 1:1209926‑M2/1‑74 (MQ=255) tAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgag > 2:408140‑M2/1‑71 (MQ=255) tAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgag < 1:1848679‑M2/100‑30 (MQ=255) aGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgaga < 2:1055187‑M2/100‑31 (MQ=255) gCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagat > 2:86468‑M2/1‑69 (MQ=255) aTTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatca > 2:541103‑M2/1‑67 (MQ=255) aTTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatca > 1:1718060‑M2/1‑67 (MQ=255) tCACACAATTGATGAAGTTTGTCTCGTAACTCAGCTATTACATCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatg > 2:1013203‑M2/1‑64 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCActct < 2:1109630‑M1/40‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTg < 1:1010883‑M1/41‑1 (MQ=255) cacacaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgggatcatgtt < 1:1953172‑M2/100‑38 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCTAGTACATCGGGAATTAATAATTCACTctgcc > 1:1574467‑M1/58‑98 (MQ=255) acaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt > 1:540533‑M2/1‑60 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATa < 2:644697‑M1/47‑1 (MQ=255) aTTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat < 2:589329‑M2/100‑44 (MQ=255) tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGa < 1:305097‑M1/49‑1 (MQ=255) gatgaAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:718722‑M2/100‑47 (MQ=255) gatgaAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCATGGGTAAAATTAAggaaggttcgaacaagtacctgatatgagatcatgtttgtcatctg < 2:606480‑M2/100‑47 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGaa < 2:470502‑M1/50‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGcc < 2:1579544‑M1/55‑1 (MQ=255) aGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc > 1:846741‑M2/1‑49 (MQ=255) ctgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCtt < 1:991901‑M1/57‑1 (MQ=255) ttGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata > 2:674591‑M2/1‑46 (MQ=255) tGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 2:1538081‑M2/1‑45 (MQ=255) ctcGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 2:1929966‑M2/100‑59 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCa > 2:1876697‑M1/38‑100 (MQ=255) cGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag > 1:2208282‑M2/1‑40 (MQ=255) cGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:2031951‑M2/100‑61 (MQ=255) cGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:1816019‑M2/100‑61 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAg < 1:406621‑M1/64‑1 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGt < 1:1072191‑M1/65‑1 (MQ=255) cgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtct < 1:1041971‑M1/67‑1 (MQ=255) aaaTCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 1:501766‑M2/1‑37 (MQ=255) gagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtctc < 1:1903462‑M1/68‑1 (MQ=255) aaTCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 2:1754738‑M2/100‑65 (MQ=255) agaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCa < 2:1486731‑M1/69‑1 (MQ=255) agaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCa > 2:733936‑M1/32‑100 (MQ=255) aTCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 2:315364‑M2/100‑66 (MQ=255) tCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 1:523395‑M2/1‑34 (MQ=255) tCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 2:520003‑M2/1‑34 (MQ=255) agaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGa < 2:1831726‑M1/72‑1 (MQ=255) aGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc > 2:1771582‑M2/1‑32 (MQ=255) aGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 1:779702‑M2/100‑69 (MQ=255) cTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:1621970‑M2/1‑30 (MQ=255) tATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 1:2322122‑M2/1‑29 (MQ=255) tATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 2:1373841‑M2/1‑29 (MQ=255) atttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACa > 1:594498‑M1/26‑100 (MQ=255) atttccccgcttattcgcaccttccTTAACAGTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACa > 2:1502422‑M1/26‑100 (MQ=255) tttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACag > 2:1559710‑M1/25‑100 (MQ=255) cgatctcatCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag > 1:481139‑M2/5‑27 (MQ=255) tccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACaga < 1:2199384‑M1/77‑1 (MQ=255) tACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt > 2:1571‑M2/1‑26 (MQ=255) aCCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 2:2192732‑M2/100‑76 (MQ=255) aCCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc < 1:1077668‑M2/100‑76 (MQ=255) cccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGAc < 1:289439‑M1/80‑1 (MQ=255) catcaGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca > 1:1676416‑M2/1‑21 (MQ=255) tattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGc > 1:1602503‑M1/15‑100 (MQ=255) caGCCTGGGAAAAATTAAggaaggtgcgaacaagttcctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact > 2:1602728‑M2/1‑18 (MQ=255) gCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 1:164498‑M2/100‑85 (MQ=255) tcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGcccc > 2:951722‑M1/12‑100 (MQ=255) tGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct < 2:355418‑M2/100‑88 (MQ=255) tGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct > 2:779701‑M2/1‑13 (MQ=255) caccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCttt < 2:1171652‑M1/92‑1 (MQ=255) ggAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 1:2156643‑M2/100‑90 (MQ=255) gAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg < 1:1194390‑M2/100‑91 (MQ=255) ttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAg > 1:1539121‑M1/5‑100 (MQ=255) aaaaTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 1:2266971‑M2/1‑8 (MQ=255) aTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:148173‑M2/1‑5 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:2158595‑M2/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:173505‑M2/1‑4 (MQ=255) | TGATGTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTT > NC_000913/2882724‑2882922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |