| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,882,823 | IS5 (+) +4 bp | coding (1313‑1316/1509 nt) | casA ← | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 166 (1.790) | 82/198 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2882826 | 0 (0.000) | coding (1313/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
| * | ? | NC_000913 | 2882823 = | 0 (0.000) | 122 (1.320) | 78/198 | 0.0 | 100% | coding (1316/1509 nt) | casA | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | NC_000913 | = 3131340 | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 272 total aligned reads displayed.
TGTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTTTAT > NC_000913/2882727‑2882925 | tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAAc > 1:639739‑M1/96‑100 (MQ=255) gtgCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAg > 2:2146583‑M2/1‑99 (MQ=255) aTAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaag > 2:1068581‑M2/1‑95 (MQ=255) catttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGc < 1:666732‑M1/11‑1 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGcc > 2:15752‑M1/89‑100 (MQ=255) gCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaa < 2:898321‑M2/100‑13 (MQ=255) acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTa < 1:951724‑M1/16‑1 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTAc > 2:334201‑M1/84‑100 (MQ=255) cTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaac > 1:1107366‑M2/1‑87 (MQ=255) cTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaac > 1:2305154‑M2/1‑87 (MQ=255) tACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaaca > 1:83665‑M2/1‑86 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACAt < 2:559974‑M1/19‑1 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACAt < 2:375601‑M1/19‑1 (MQ=255) aCAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaa < 1:2143311‑M2/100‑16 (MQ=255) cAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaag > 2:288115‑M2/1‑84 (MQ=255) attgattAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtcc < 2:823429‑M2/100‑20 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGa > 2:465103‑M1/77‑100 (MQ=255) tgattAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccct < 2:501764‑M2/100‑22 (MQ=255) tgattAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCCATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccct > 1:58305‑M2/1‑79 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGaa < 2:2120238‑M1/25‑1 (MQ=255) attAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctga < 1:2105038‑M2/100‑24 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAAtt > 2:155353‑M1/74‑100 (MQ=255) ttAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgat > 2:1762585‑M2/1‑76 (MQ=255) tcggctcaaacatgaagaaatgaaatgaccgagtcagctgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATtaa < 2:1442077‑M1/29‑1 (MQ=255) aaaTAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatat > 1:1209926‑M2/1‑74 (MQ=255) aaTAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatg < 2:1515431‑M2/100‑28 (MQ=255) aTAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatga < 2:1748831‑M2/100‑29 (MQ=255) tAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgag > 2:408140‑M2/1‑71 (MQ=255) tAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgag < 1:1848679‑M2/100‑30 (MQ=255) tAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgag > 1:823431‑M2/1‑71 (MQ=255) aGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgaga < 2:156155‑M2/100‑31 (MQ=255) aGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgaga < 2:1055187‑M2/100‑31 (MQ=255) gCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagat < 2:1676411‑M2/100‑32 (MQ=255) gCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagat > 2:86468‑M2/1‑69 (MQ=255) gCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagat < 1:86470‑M2/100‑32 (MQ=255) caaacatgaagaaatgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTc > 2:2037756‑M1/66‑100 (MQ=255) cATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatc > 2:632403‑M2/1‑68 (MQ=255) aTTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatca > 1:1718060‑M2/1‑67 (MQ=255) tCACACAATTGATGAAGTTTGTCTCGTAACTCAGCTATTACATCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatg > 2:1013203‑M2/1‑64 (MQ=255) atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCActct < 2:1109630‑M1/40‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTg < 1:1010883‑M1/41‑1 (MQ=255) cacacaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgggatcatgtt < 1:1953172‑M2/100‑38 (MQ=255) cacacaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 2:692297‑M2/1‑63 (MQ=255) cacaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttg > 1:1339904‑M2/1‑61 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCTAGTACATCGGGAATTAATAATTCACTctgcc > 1:1574467‑M1/58‑98 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTc < 1:2226076‑M1/43‑1 (MQ=255) acaATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt > 1:540533‑M2/1‑60 (MQ=255) caATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc < 2:2266963‑M2/100‑42 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATa < 2:644697‑M1/47‑1 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATa < 1:2336265‑M1/47‑1 (MQ=255) gatgaAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 1:1182344‑M2/100‑47 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGc < 2:473050‑M1/54‑1 (MQ=255) tctcGTAAATCAGCTATTACCTCATCAGCCTGGGAAGAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 1:1648979‑M2/100‑58 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTg > 2:2253256‑M1/40‑100 (MQ=255) gtcagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTg > 2:1498604‑M1/40‑100 (MQ=255) ctcGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 2:846422‑M2/100‑59 (MQ=255) ctcGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 1:409907‑M2/100‑59 (MQ=255) cagccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCa < 1:340507‑M1/63‑1 (MQ=255) cGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag < 1:2031951‑M2/100‑61 (MQ=255) agccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAg < 1:499088‑M1/64‑1 (MQ=255) gccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGt < 1:1072191‑M1/65‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtc < 2:594497‑M1/66‑1 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtc < 1:733937‑M1/66‑1 (MQ=255) cgagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtct < 1:1041971‑M1/67‑1 (MQ=255) aaaTCAGCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt > 2:1953165‑M2/1‑37 (MQ=255) gagaagaatttccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGtctc < 1:1903462‑M1/68‑1 (MQ=255) gCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 1:613733‑M2/1‑31 (MQ=255) gCTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaaggccctggtatgatagcatgtttgtcatctggagccatagaacggggttcatc < 1:1634622‑M2/99‑69 (MQ=255) cTATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:1621970‑M2/1‑30 (MQ=255) tATTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 1:1515435‑M2/1‑29 (MQ=255) aTTACCTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:2187963‑M2/100‑73 (MQ=255) tccccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACaga < 1:2199384‑M1/77‑1 (MQ=255) cccgcttattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGAc < 1:289439‑M1/80‑1 (MQ=255) ccTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca < 1:1687614‑M2/100‑77 (MQ=255) ccTCATCAGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 2:1840825‑M2/1‑24 (MQ=255) tcatcaGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc > 2:660889‑M2/1‑22 (MQ=255) tattcgcaccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGc > 1:1602503‑M1/15‑100 (MQ=255) caGCCTGGGAAAAATTAAggaaggtgcgaacaagttcctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact > 2:1602728‑M2/1‑18 (MQ=255) caGCCTGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 2:2337942‑M2/100‑83 (MQ=255) tGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct > 2:779701‑M2/1‑13 (MQ=255) tGGGAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct < 2:355418‑M2/100‑88 (MQ=255) gggAAAAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt < 2:586804‑M2/100‑89 (MQ=255) caccttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCttt < 2:1171652‑M1/92‑1 (MQ=255) cttccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGaa > 1:1831731‑M1/6‑100 (MQ=255) aaaaTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 2:164496‑M2/1‑8 (MQ=255) aaaaTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc > 2:178990‑M2/1‑8 (MQ=255) tccTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGt < 1:515634‑M1/97‑1 (MQ=255) cTTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCt < 2:1387144‑M1/99‑1 (MQ=255) aTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 1:148173‑M2/1‑5 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:173505‑M2/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca > 2:530904‑M2/1‑4 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgctgacag > 2:1001361‑M2/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 2:1145482‑M2/100‑98 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 2:1924610‑M2/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 1:471093‑M2/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag > 2:1859609‑M2/1‑3 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:648741‑M2/100‑99 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt > 1:2257193‑M2/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt < 1:1771321‑M2/100‑99 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg < 2:2091958‑M2/100‑100 (MQ=255) | TGTGCATAGGGAGCTACAGATTGATTAAATAGCATTTCACACAATTGATGAAGTTTGTCTCGTAAATCAGCTATTACCTCATCAGCCTGGGAAAAATTAACATTCGCCAGTACATCGGGAATTAATAATTCACTCTGTCGATAGAAATGCCTTTCTGCAGTCTCATGAACAGAGACTCCGGCCCCTTTGAAGTCTTTAT > NC_000913/2882727‑2882925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |