New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3621232NA (NA)26 (0.190) 8/168 NT 100% coding (2041/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3621274 0 (0.000)coding (2083/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCtgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3621134‑3621232
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  <  NC_000913/3621274‑3621171
                                                                                                                                                                                                            
GTGAAAACGGCAGCCACACCACCTTCTGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  1:2507496/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACCCAGCGTTATCACCACGACCT                                                                                                          >  2:801822/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATTACCACGACCT                                                                                                          >  2:3752465/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  2:3259383/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          <  1:301060/100‑1
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  1:3111859/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  2:4014218/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  1:625345/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  2:1596527/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          <  1:1607277/100‑1
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  2:802859/1‑100
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCT                                                                                                          >  1:1264862/1‑100
  GAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGA                                                                                                        >  1:1613250/1‑100
  GAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGA                                                                                                        >  1:1185104/1‑100
  GAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGA                                                                                                        <  1:3046963/100‑1
  GAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACAGCCGCACACAGCGTTATCACCACGACCTGA                                                                                                        >  1:683612/1‑100
   AAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCTGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGAC                                                                                                       >  2:3360498/1‑100
   AAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGAC                                                                                                       <  1:877232/100‑1
   AAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGACCGCACCCAGCGTTATCACCACGACCTGAC                                                                                                       >  2:1971117/1‑100
    AAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACC                                                                                                      >  2:3683506/1‑100
    AAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACC                                                                                                      >  2:219510/1‑100
    AAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACC                                                                                                      >  1:1400756/1‑100
     AACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGAC                                                                                                       >  2:3056101/1‑98
                                      ctcGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGG                                                                   >  2:3456415/4‑100
                                      CTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCTCGCTGCGGATAAGTTTGCCG                                                                    <  1:425372/100‑1
                                         ccgatctTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCA                                                                <  1:2476371/93‑1
                                         GACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCn                                                                <  2:3788191/100‑2
                                          ACCGGCTGGTACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAG                                                               <  2:3973751/100‑1
                                           CCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGG                                                              <  1:3456436/100‑1
                                           CCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGG                                                              <  1:616081/100‑1
                                           CCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGG                                                              <  2:849703/100‑1
                                            CGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGT                                                             <  1:299126/100‑1
                                            CGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGT                                                             <  1:86285/100‑1
                                            CGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGT                                                             <  2:3416441/100‑1
                                            CGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCTCTGCGGATAAGTTTGCCGGTCAGGT                                                             <  2:3662060/100‑1
                                            CGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGT                                                             <  2:1759831/100‑1
                                             GGCTGATACAGGAACCCGGCTTTGACGGCCGCACACTGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGG                                                              <  2:1427819/98‑1
                                             GGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGCCCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGG                                                              <  2:1509266/98‑1
                                             GGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑CCCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTC                                                            <  2:1613457/100‑1
                                             GGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTC                                                            <  2:3950392/100‑1
                                             GGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCGCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTC                                                            <  2:3924176/100‑1
                                             GGCTGAGACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTC                                                            <  2:3130074/100‑1
                                              GCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCG                                                           <  1:3085465/100‑1
                                              GCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCG                                                           <  2:638210/100‑1
                                              GCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCG                                                           <  1:74802/100‑1
                                              GCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCG                                                           <  1:2126210/100‑1
                                                TGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAagatcgg                                                         >  2:2476357/1‑93
                                                 GATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGG                                                        <  2:361862/100‑1
                                                                 TTTGACGGCCGCACACAGCGTTATCACCACGACCTTACCAG‑ACCCTCATCCTCGCTGCTGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGC                                        <  1:343610/100‑1
                                                                                                    gcCCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  2:450862/98‑1
                                                                                                    ctCCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  1:2613276/98‑1
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     >  2:927828/1‑100
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  2:3154598/100‑1
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  1:129271/100‑1
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     >  2:1825388/1‑100
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     >  2:17158/1‑100
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  2:1197095/100‑1
                                                                                                    GACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     <  2:3321345/100‑1
                                                                                                    GACCAG‑ACCCTCATCCTCGCCGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCA     >  2:2530118/1‑100
                                                                                                     ACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAA    <  2:2030469/100‑1
                                                                                                     ACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAA    >  1:1379646/1‑100
                                                                                                     ACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAA    >  2:577505/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  1:814658/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  1:1058865/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  2:804965/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  1:1869671/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  1:2592419/1‑100
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   <  1:3748907/100‑1
                                                                                                      CCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  2:2613260/1‑100
                                                                                                      CCAG‑ACCATCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAG   >  2:3944016/1‑100
                                                                                                       CAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  >  2:2652554/1‑100
                                                                                                       CAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  <  1:1121807/100‑1
                                                                                                       CAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  <  2:3262736/100‑1
                                                                                                       CAG‑ACCCTCATCCTCGCTGCGGATAAGTTGGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  <  2:576097/100‑1
                                                                                                                                                                                                            
GTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCtgacc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3621134‑3621232
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCAG‑ACCCTCATCCTCGCTGCGGATAAGTTTGCCGGTCAGGTCGTGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCCTGTATCAGCCGGTCAAGT  <  NC_000913/3621274‑3621171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.