| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4611021 | 143 (0.970) | 11 (0.080) | 8/162 | NT | 7.6% | intergenic (+18/‑375) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4611031 | 137 (1.020) | intergenic (+28/‑365) | prfC/osmY | peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4610915‑4611021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcgcAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCATGC < NC_000913/4611031‑4610933 TCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCC < 1:3977265/100‑1TCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCC < 2:2982427/100‑1TCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCC < 2:2421612/100‑1 GCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAG < 1:3174427/100‑1 GCTTACATCGCTACCAGCATGGTCAACCTGCGCATGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAG > 2:2690841/1‑100 cgTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCGCAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAG < 2:1943501/97‑1 CTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGG < 2:1654507/100‑1 CATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC < 2:231519/100‑1 CATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC > 2:3807570/1‑100 CATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC > 2:123902/1‑100 GCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC > 2:1273106/1‑96 GTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCC < 2:1894995/100‑1 TCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCT < 1:1881587/100‑1 TCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCT < 1:406871/100‑1 CAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTa < 1:3033155/100‑2 CAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTG < 1:1186866/100‑1 CAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTGCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTG < 2:922273/100‑1 AACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTGG < 2:1006625/100‑1 GCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAG < 1:885641/100‑1 CAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATG < 1:1327618/100‑1 TTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGG < 2:3129363/100‑1 GTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAA > 1:357196/1‑100 CAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTG < 1:1039679/100‑1 CAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTG < 1:1243999/100‑1 CAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGCGCCTGGCACAGGaac < 1:886938/100‑4 CAGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGCGCCTGGCACAGGaac < 1:1341310/100‑4 CAGGGCGCAGCGACTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTG > 1:2715907/1‑100 AGGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGCGCCTGGCACAGGaacg < 1:2585353/100‑5 GGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGAC > 1:713452/1‑100 GGGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGAC < 1:2464403/100‑1 GGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACC < 1:553473/100‑1 GGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACC < 1:2057/100‑1 GGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACC < 2:118020/100‑1 GGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACC > 1:744005/1‑100 GGCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACC < 1:3810976/100‑1 GCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCA < 1:2637296/100‑1 GCGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCA < 1:3799427/100‑1 CGCAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCAT > 2:4132118/1‑100 CAGCGGCTACTGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCATGC < 2:2715891/100‑1 TCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4610915‑4611021‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggcgcAGCGGCTACCGCGCCCTGGAGGCAAGAATTAATGCTCGCGGGTCTGGTGGAACTGAACGTCCGGATAACGTTCCTGTGCCAGGCGCAGGTTGACCATGC < NC_000913/4611031‑4610933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |