New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4611021143 (0.970)11 (0.080) 8/162 NT 7.6% intergenic (+18/‑375) prfC/osmY peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein
?NC_000913 = 4611031 137 (1.020)intergenic (+28/‑365) prfC/osmY peptide chain release factor RF‑3/salt‑inducible putative ABC transporter periplasmic binding protein
Rejected: Frequency below cutoff threshold.

Only 100 of 186 total aligned reads displayed.

AGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCGGTTTCAAA  >  NC_000913/4610932‑4611130
                                                                                                   |                                                                                                   
aGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCt                                                                                                     <  1:123903/100‑1 (MQ=255)
aGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCt                                                                                                     >  2:1458667/1‑100 (MQ=255)
     ggTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgcc                                                                                                <  1:3810976‑M2/100‑6 (MQ=255)
     ggTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgcc                                                                                                >  1:744005‑M2/1‑95 (MQ=255)
     ggTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgcc                                                                                                <  1:553473‑M2/100‑6 (MQ=255)
      gTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccc                                                                                               <  1:2464403‑M2/100‑7 (MQ=255)
       cgttcctgtgCCAGGCGCAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccct                                                                                              <  1:2585353‑M2/96‑8 (MQ=255)
        gttcctgtGCCAGGCGCAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccctg                                                                                             <  1:886938‑M2/97‑9 (MQ=255)
        cAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGTCGCTgcgccctg                                                                                             >  1:2715907‑M2/1‑92 (MQ=255)
        cAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccctg                                                                                             <  1:1039679‑M2/100‑9 (MQ=255)
         aaCCTGCGCCTGGCACAGGAACGTTAACCGGACGTCCCGTTCCACCAGACCCAAGAGCAAAAAATCTTGCCCGCAGTGCGCGGTAGCCGCTGCACCCt                                                                                              >  2:329334/1‑98 (MQ=255)
           ccTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCa                                                                                          >  2:329399/1‑100 (MQ=255)
           ccTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCa                                                                                          >  1:363118/1‑100 (MQ=255)
            cTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCaa                                                                                         >  2:2837750/1‑100 (MQ=255)
             tGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAt                                                                                        <  2:457944/100‑1 (MQ=255)
                gcCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTc                                                                                     >  2:3485169/1‑100 (MQ=255)
                gcCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTc                                                                                     >  1:369394/1‑100 (MQ=255)
                 ccTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTcc                                                                                    <  1:2389474/100‑1 (MQ=255)
                 ccTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTcc                                                                                    <  1:428266/100‑1 (MQ=255)
                 ccTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTcc                                                                                    >  2:121970/1‑100 (MQ=255)
                  cTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTccc                                                                                   <  1:3472370/100‑1 (MQ=255)
                   tGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcct                                                                                  >  1:1442441/1‑100 (MQ=255)
                    ggCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcctt                                                                                 <  1:98332/100‑1 (MQ=255)
                     gCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttc                                                                                <  1:834681/100‑1 (MQ=255)
                     gCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttc                                                                                >  1:3872567/1‑100 (MQ=255)
                     gCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttc                                                                                <  2:3913221/100‑1 (MQ=255)
                      cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcc                                                                               <  2:1079596/100‑1 (MQ=255)
                      cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcc                                                                               <  2:1145828/100‑1 (MQ=255)
                      cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcc                                                                               <  1:1826659/100‑1 (MQ=255)
                      cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcc                                                                               <  1:4058902/100‑1 (MQ=255)
                       acaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcct                                                                              >  2:1652002/1‑100 (MQ=255)
                       acaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcct                                                                              >  2:797564/1‑100 (MQ=255)
                       acaAGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcct                                                                              <  2:1915777/100‑1 (MQ=255)
                        caGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcctt                                                                             <  1:15887/100‑1 (MQ=255)
                          ggAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttat                                                                           >  1:1119680/1‑100 (MQ=255)
                            aaCGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttatta                                                                         >  1:3598187/1‑100 (MQ=255)
                             aCGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttattan                                                                        <  2:228314/100‑2 (MQ=255)
                                ttATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTCCCTTATTAGCCg                                                                     >  2:2192922/1‑100 (MQ=255)
                                 tATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGc                                                                    >  2:306265/1‑100 (MQ=255)
                                 tATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGc                                                                    <  1:3038529/100‑1 (MQ=255)
                                  aTCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCTGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCt                                                                   <  2:3889848/100‑1 (MQ=255)
                                    ccGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTGTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTa                                                                 >  2:6655/1‑100 (MQ=255)
                                    ccGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTa                                                                 >  2:2858475/1‑100 (MQ=255)
                                     nggACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTAc                                                                >  1:1770711/2‑100 (MQ=255)
                                      ggACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACg                                                               <  1:3807522/100‑1 (MQ=255)
                                        aCGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGa                                                             <  2:3883131/100‑1 (MQ=255)
                                         cGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCAAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGa                                                             >  2:4056322/1‑99 (MQ=255)
                                          gTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCGCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAAt                                                           <  2:2206951/100‑1 (MQ=255)
                                           ttCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATg                                                          >  2:3957423/1‑100 (MQ=255)
                                           ttCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATg                                                          <  1:3691922/100‑1 (MQ=255)
                                            tCAGTTCCACCATACCCGCGAGCATTAAGTCTTGCCTCCGGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                                         <  1:487212/100‑1 (MQ=255)
                                            tCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                                         <  2:1534987/100‑1 (MQ=255)
                                            tCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                                         >  1:3858080/1‑100 (MQ=255)
                                             cAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                                         <  2:3403423/99‑1 (MQ=255)
                                              aGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTc                                                       <  2:3197205/100‑1 (MQ=255)
                                              aGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTc                                                       <  2:964179/100‑1 (MQ=255)
                                                    accaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaaaa                                                 <  1:329402/100‑1 (MQ=255)
                                                    accaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaaaa                                                 >  2:38766/1‑100 (MQ=255)
                                                    accaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaaaa                                                 <  2:822533/100‑1 (MQ=255)
                                                     ccaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAAc                                                >  2:412957/1‑100 (MQ=255)
                                                       aGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAt                                              <  1:3851586/100‑1 (MQ=255)
                                                       aGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAt                                              <  2:767780/100‑1 (MQ=255)
                                                        gACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAtt                                             <  1:2345715/100‑1 (MQ=255)
                                                          cccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataa                                           <  2:3129363‑M2/100‑59 (MQ=255)
                                                          cccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCa                                           >  2:2996985/1‑100 (MQ=255)
                                                             gcgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCTCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACtt                                        >  1:2911599/1‑100 (MQ=255)
                                                              cgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACttt                                       <  1:3119378/100‑1 (MQ=255)
                                                                 gCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGc                                    <  1:942385/100‑1 (MQ=255)
                                                                  cATTAATTCTTGTCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCt                                   <  2:2865150/100‑1 (MQ=255)
                                                                  cATTAATTCTTGCCTCCAGGGCGCGGTATCCGCTGCGCGCTGGCAATTGCCCTTCCTGATTAGCCGCTTACGGAATTTTCTTAAGACATGCACTTGTGCt                                   >  1:3933246/1‑100 (MQ=255)
                                                                  cATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataacgttcctg                                   <  1:1327618‑M2/100‑67 (MQ=255)
                                                                  cATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCt                                   >  2:203606/1‑100 (MQ=255)
                                                                  cATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCt                                   <  1:3538040/100‑1 (MQ=255)
                                                                  cATTAATTCTGGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGGTTCCGGAATGTTCTTAAAACATTCACTTTTGCt                                   <  2:2722085/100‑1 (MQ=255)
                                                                   aTTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCtt                                  >  1:324227/1‑100 (MQ=255)
                                                                    ttAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTa                                 <  2:1744403/100‑1 (MQ=255)
                                                                          cTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGtttt                           <  1:2263678/100‑1 (MQ=255)
                                                                             gCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGc                        <  1:1224885/100‑1 (MQ=255)
                                                                              ccTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCt                       >  2:658419/1‑100 (MQ=255)
                                                                              ccTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCt                       >  2:1084941/1‑100 (MQ=255)
                                                                               cTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCt                       >  1:2642186/1‑99 (MQ=255)
                                                                                 ccAGGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataacgttcctgtgccaggcgcaggtt                    <  2:1006625‑M2/100‑82 (MQ=255)
                                                                                  tagGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataacgttcctgtgccaggcgcaggttg                   <  1:3033155‑M2/99‑83 (MQ=255)
                                                                                  cAGGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgcacgtccggataacgttcctgtgccaggcgcaggttg                   <  2:922273‑M2/100‑83 (MQ=255)
                                                                                  cAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGata                   >  2:1330263/1‑100 (MQ=255)
                                                                                  cAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGata                   <  1:1753334/100‑1 (MQ=255)
                                                                                   aGGGCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataacgttcctgtgccaggcgcaggttga                  <  1:406871‑M2/100‑84 (MQ=255)
                                                                                   aGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGat                    <  2:1640941/98‑1 (MQ=255)
                                                                                    gggCGCGGTAGCCGCTgcgccctggaggcaagaattaatgctcgcgggtctggtggaactgaacgtccggataacgttcctgtgccaggcgcaggttgac                 <  2:1894995‑M2/100‑85 (MQ=255)
                                                                                     ggCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATcc                <  1:2170340/100‑1 (MQ=255)
                                                                                      gcgcGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATccc               >  2:752501/1‑100 (MQ=255)
                                                                                       cgcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCg              >  2:2889879/1‑100 (MQ=255)
                                                                                          ggTAGCCGCTGCGCCCTGTCAATTTCCCTTCTTTATTCGCCGCTTACCGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGc           <  2:2789880/100‑1 (MQ=255)
                                                                                          ggTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGc           <  2:2589548/100‑1 (MQ=255)
                                                                                           gTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCg          <  2:369391/100‑1 (MQ=255)
                                                                                           gTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCg          >  1:2974794/1‑100 (MQ=255)
                                                                                            tAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCgg         <  1:3968974/100‑1 (MQ=255)
                                                                                              gCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCGGtt       <  1:1994019/100‑1 (MQ=255)
                                                                                               ccGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCGGttt      <  2:1577835/100‑1 (MQ=255)
                                                                                                 gCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCGGTTTCa    >  2:3626184/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATATCCCGAGCGGTTTCAAA  >  NC_000913/4610932‑4611130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.