| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4631582 = | 196 (1.330) | 8 (0.060) | 4/168 | NT | 4.3% | coding (850/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | 4631612 = | 167 (1.200) | coding (880/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CGGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4631685‑4631582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGC > NC_000913/4631612‑4631710 CGGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGA > 1:1816473/1‑100CGGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGA > 1:977692/1‑100 GGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGAn < 2:844204/100‑2 GGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGAC < 1:268697/100‑1 GGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGAC < 2:697889/100‑1 GCGTTCAATAAGCGGAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACG > 2:3617529/1‑100 GCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACG > 2:2297409/1‑100 CGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGA < 1:2847548/100‑1 CGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGA > 1:564694/1‑100 GTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT < 1:1301125/100‑1 GTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT > 2:796375/1‑100 GTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT > 2:1293773/1‑100 GTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT < 1:313401/100‑1 GGTGACATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTA > 1:81584/1‑100 GGTGACATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTA > 2:2789555/1‑100 gcGACATCGTTGCCCATCAAACGCCAGGCGACGATATCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAT > 1:3788429/3‑100 GACATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCTCTCGCAATCTACTTCGCTTATTG > 2:1501933/1‑100 ACATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGA > 2:3825526/1‑100 ACATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTG > 1:1250186/1‑99 cgTCGTTGCCCATCAAACGCCAGGCGACGATATCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAA > 1:2792077/3‑100 CATCGTTGCCCATCAAACGCCAGGCGACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAA > 1:1558729/1‑100 CGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCCTGGCACC > 2:736786/1‑100 TGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCCTGGCACCGGC < 1:2913378/100‑1 CGGCGTTCAATAAGCGAAGTAGATTGCGAGCGCATAATGGCGTCATCGCGCCATTTCGCCTGCTCGTCGGTGACATCGTTGCCCATCAAACGCCAGGCGACGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4631685‑4631582‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgatGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGC > NC_000913/4631612‑4631710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |