New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4631582 =196 (1.330)8 (0.060) 4/168 NT 4.3% coding (850/1938 nt) slt lytic murein transglycosylase, soluble
?NC_000913 4631612 = 167 (1.200)coding (880/1938 nt) slt lytic murein transglycosylase, soluble
Rejected: Frequency below cutoff threshold.

Only 100 of 222 total aligned reads displayed.

AGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAC  >  NC_000913/4631483‑4631681
                                                                                                   |                                                                                                   
aGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGata                                                                                                     >  1:3304966/1‑100 (MQ=255)
aGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGACTCAGGAGCTGCGCGata                                                                                                     >  2:3021865/1‑100 (MQ=255)
   gtgGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAtcg                                                                                                  <  1:3704818/100‑1 (MQ=255)
     ggCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATAtcgtc                                                                                                <  2:3348934/100‑1 (MQ=255)
       cgcgGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGc                                                                                              >  1:141803/1‑100 (MQ=255)
            cAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGc                                                                                         >  2:1593265/1‑100 (MQ=255)
             aGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCg                                                                                        <  1:1870816/100‑1 (MQ=255)
              ggATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGt                                                                                       <  2:3912715/100‑1 (MQ=255)
              ggATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGt                                                                                       <  2:1612484/100‑1 (MQ=255)
              ggATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGt                                                                                       <  2:2388861/100‑1 (MQ=255)
               gATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGtt                                                                                      <  1:1725314/100‑1 (MQ=255)
                aTGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGttt                                                                                     <  1:3786738/100‑1 (MQ=255)
                aTGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGttt                                                                                     >  1:1827112/1‑100 (MQ=255)
                 cgCTGAGCATGCACGGCTGATGATCCGATCGATTGCCCAGGCGCAGCAGCGTAATGAAGAGCCGATTACATAGCTGCGCGATATCGTCGCCTGTCGTTTg                                                                                    >  2:838747/2‑100 (MQ=255)
                  gCTGAGAATGCACGGCTGATGATCCCATCGCTGGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGa                                                                                   >  1:3922516/1‑100 (MQ=255)
                   cTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGAt                                                                                  >  1:803662/1‑100 (MQ=255)
                     gagaATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATgg                                                                                <  1:82874/100‑1 (MQ=255)
                     gagaATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATgg                                                                                <  1:2614969/100‑1 (MQ=255)
                      agaATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATggg                                                                               <  2:3857349/100‑1 (MQ=255)
                       gaATGCACGGCTGATTATCCCATCGCATGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGc                                                                              <  2:3806270/100‑1 (MQ=255)
                        aaTGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCa                                                                             >  1:1126126/1‑100 (MQ=255)
                        aaTGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCa                                                                             <  1:1228123/100‑1 (MQ=255)
                         aTGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCaa                                                                            >  1:2972937/1‑100 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  1:2091716/1‑100 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  2:1732623/1‑100 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         <  2:2100581/100‑1 (MQ=255)
                            cACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGa                                                                         >  1:3092899/1‑100 (MQ=255)
                              ttcaataagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       >  1:1558729‑M1/70‑100 (MQ=255)
                              cGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATg                                                                       >  2:937946/1‑100 (MQ=255)
                                gCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTc                                                                     >  1:2885443/1‑100 (MQ=255)
                                gCTGATGATCCCACCGCTTGCCCAGTCGCAGCAGCTTAATGGAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTc                                                                     <  1:16405/100‑1 (MQ=255)
                                caataagcgaagtagattgcgagagcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGTc                                                                     >  2:1501933‑M1/68‑100 (MQ=255)
                                  tgatgaTCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAc                                                                   <  1:363043/100‑1 (MQ=255)
                                   taagcgaagtagattgcgagcgcataatggcgtcatcgcgccatttcgcctgctcgtcggtgacATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  >  2:2789555‑M1/65‑100 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  >  2:757412/1‑100 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  <  2:181871/100‑1 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  <  1:1683089/100‑1 (MQ=255)
                                   gatgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCAcc                                                                  >  2:3497035/1‑100 (MQ=255)
                                    atgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcg                                                                 <  1:1261946/100‑1 (MQ=255)
                                     tgatCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACcga                                                                >  2:2039832/1‑100 (MQ=255)
                                          ccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATCGCGTCGCCTGGCGTTTGATGGACAACGATGTCACCGACGAGc                                                           >  2:2897491/1‑100 (MQ=255)
                                          ccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGc                                                           >  2:3968590/1‑100 (MQ=255)
                                          ccATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGc                                                           <  2:252554/100‑1 (MQ=255)
                                           cttCGCTTGCCCAGGCGCAGCAGCTTAATGAGGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          >  1:2789374/3‑100 (MQ=255)
                                           cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          <  1:497572/100‑1 (MQ=255)
                                           cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          <  2:3599737/100‑1 (MQ=255)
                                           cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          >  1:1808753/1‑100 (MQ=255)
                                           cATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCa                                                          <  2:3685066/100‑1 (MQ=255)
                                             tCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAgg                                                        <  1:1489172/100‑1 (MQ=255)
                                             tCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCGGGCGTTTGATGGGCAACGATGTCACCGACGAGCAgg                                                        <  2:917117/100‑1 (MQ=255)
                                               gCTTGCCCAGGCGCAGCAGCTTAATGAAGCTCAGATTCAGGAGATGCGCCATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                      <  2:2407965/100‑1 (MQ=255)
                                               gCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                      >  1:1319204/1‑100 (MQ=255)
                                               gCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCg                                                      >  1:1037907/1‑100 (MQ=255)
                                                cTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGa                                                     <  2:581286/100‑1 (MQ=255)
                                                cTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGa                                                     >  1:2369875/1‑100 (MQ=255)
                                                  tGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGaaa                                                   >  2:229899/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 >  2:4059447/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 >  1:3189035/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 >  2:1576073/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 >  1:1362085/1‑100 (MQ=255)
                                                    cccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATg                                                 >  1:2157746/1‑100 (MQ=255)
                                                     ccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGCTATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATgg                                                <  2:298387/100‑1 (MQ=255)
                                                     ccAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATgg                                                <  1:2541985/100‑1 (MQ=255)
                                                      cAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGgc                                               >  1:985856/1‑100 (MQ=255)
                                                           gcagcaGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGAt                                          <  1:2742508/100‑1 (MQ=255)
                                                             agcagcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGa                                        >  1:3017320/1‑100 (MQ=255)
                                                              gcagcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGAc                                       >  2:1425286/1‑100 (MQ=255)
                                                              gcagcTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGAc                                       >  1:380529/1‑100 (MQ=255)
                                                                    tAATGAAGATCAGGTTCAGGGGCTGCGCGATATCGTCGCCTGGCGTTTGATAGGCAACGATCTCACCGCCGTGCCGGCGCAATGGGGAGATGACGc                                     >  2:1967076/1‑96 (MQ=255)
                                                                     aaTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCAtt                                 <  2:400120/99‑1 (MQ=255)
                                                                     aaTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTa                                <  2:3009955/100‑1 (MQ=255)
                                                                      aTGAAGCTCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCACGCGAAATGGCGCGATGACGcc                                    >  2:1860544/1‑95 (MQ=255)
                                                                      aTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTAt                               >  1:2005537/1‑100 (MQ=255)
                                                                      aTGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTAt                               >  1:4108875/1‑100 (MQ=255)
                                                                       tGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATg                              >  1:2668593/1‑100 (MQ=255)
                                                                        gAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATgc                             <  1:1873859/100‑1 (MQ=255)
                                                                           gATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCt                          >  2:3087637/1‑100 (MQ=255)
                                                                           gATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGAAACGATGTCACCGACGAGCAGGCACAATGCCACGATCACGCCAATATgccc                           >  2:3644956/1‑97 (MQ=255)
                                                                            aTCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTc                         >  1:1924271/1‑100 (MQ=255)
                                                                             tCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCg                        >  1:2488505/1‑100 (MQ=255)
                                                                             ncAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCACTATGCGCTCg                        >  2:492166/2‑100 (MQ=255)
                                                                              cAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGc                       <  1:3378779/100‑1 (MQ=255)
                                                                              cAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATACGCTCg                        <  2:1020335/99‑1 (MQ=255)
                                                                                  ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATc                   <  2:2680408/100‑1 (MQ=255)
                                                                                  ttCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATc                   >  1:2680424/1‑100 (MQ=255)
                                                                                   tCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCt                  <  2:561997/100‑1 (MQ=255)
                                                                                     aGGAGCTGCGCGATATCGTCGACTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCCATGACGCCATTATGCGCTCGCAATCTAc                >  2:171460/1‑100 (MQ=255)
                                                                                        aGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTc             >  1:3520705/1‑100 (MQ=255)
                                                                                         gCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCg            >  1:2303911/1‑100 (MQ=255)
                                                                                          cTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGc           <  1:3127562/100‑1 (MQ=255)
                                                                                          cTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGc           <  2:1127535/100‑1 (MQ=255)
                                                                                          cTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGc           >  1:1189122/1‑100 (MQ=255)
                                                                                            gcgcGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCtt         <  2:2140392/100‑1 (MQ=255)
                                                                                              gcgATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTAt       <  2:132469/100‑1 (MQ=255)
                                                                                              gcgATATCGTCGCCTGGCGTTTGATGGACAACGATGTCACCTACGCGCAGCCGAAATGCCGCGATGACGCCCTTATGCGCTCACAATCTACTTCGCTTa        >  2:2623806/1‑99 (MQ=255)
                                                                                                gATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTg     <  2:697723/100‑1 (MQ=255)
                                                                                                gATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTg     >  1:3331857/1‑100 (MQ=255)
                                                                                                gATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTg     <  1:293095/100‑1 (MQ=255)
                                                                                                   ATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAc  >  2:796375‑M1/1‑100 (MQ=255)
                                                                                                   ATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAc  >  2:1293773‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAAC  >  NC_000913/4631483‑4631681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.