BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2393130	NA (NA)	10 (0.070)	4/164	NT	NA	intergenic (‑89/+75)	nuoM/nuoL	NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
*	?	NC_000913	= 2393162	NA (NA)	10 (0.070)	4/164	NT	NA	noncoding (32/36 nt)	REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 169 total aligned reads displayed.

GGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393031‑2393229

  tagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgt                                                                                                   <  2:1070023‑M1/100‑3 (MQ=255)

      aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgga                                                                                               <  2:3596253‑M1/100‑7 (MQ=255)

      aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcgca                                                                                               >  2:2505929‑M1/1‑94 (MQ=255)

         aTGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGc                                                                                            <  2:3133366/100‑1 (MQ=255)

          tGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCa                                                                                           <  2:1469374/100‑1 (MQ=255)

          tGGCGATCTTTATTCCGTTTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggat                                                                                              <  2:936884‑M1/97‑8 (MQ=255)

           ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          >  1:1549222/1‑100 (MQ=255)

           ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAc                                                                                          >  1:1945663/1‑100 (MQ=255)

              gATCTTTATTCCTTGTAAAAGTCCCGTCAGGCCCGGTTTTTCAACGAATTCTTACGACAGAAAATTCTCTTCGGACTGGTTGTAGTGTCGGATGCAc                                                                                          >  2:3816879/1‑97 (MQ=255)

               aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACTAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGcgccgc                                                                                       >  2:619972/1‑99 (MQ=255)

               aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                                                                      <  2:3079812/100‑1 (MQ=255)

                 cTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGaa                                                                                    >  2:666981/1‑100 (MQ=255)

                   ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                                  >  1:3723964/1‑100 (MQ=255)

                      ttCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcgg                                                                               <  1:2275452/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  1:1672336/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  1:2064526/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:3660073/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:2869438/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:2140745/100‑1 (MQ=255)

                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                                              <  2:2498467/100‑1 (MQ=255)

                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                             <  2:15688/100‑1 (MQ=255)

                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                             <  2:1453229/100‑1 (MQ=255)

                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                                             >  2:3438736/1‑100 (MQ=255)

                         cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                                                            >  1:131507/1‑100 (MQ=255)

                            gTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATC                                                                         >  2:1004148‑M2/1‑100 (MQ=255)

                             tAACAGTCCCTTCAGGACCGGATTTTCAACGAATTCTCTCTACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCC                                                                        >  2:3763344‑M2/1‑100 (MQ=255)

                             tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCC                                                                        >  2:3324399‑M2/1‑100 (MQ=255)

                              aaaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCG                                                                       <  1:1105089‑M2/100‑1 (MQ=255)

                               aaaGTCCCGTCAGGACCGGTTTTTCAACGAATTCTAACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCG                                                                       <  2:137636‑M2/99‑1 (MQ=255)

                               aaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGA                                                                      >  1:247670‑M2/1‑100 (MQ=255)

                               aaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGA                                                                      <  1:1239544‑M2/100‑1 (MQ=255)

                                aaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgac                                                                     <  1:870614‑M1/100‑33 (MQ=255)

                                aaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAC                                                                     >  2:235574‑M2/1‑100 (MQ=255)

                                aaGTCCCGTCAGGACCGGACTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgac                                                                     <  1:915481‑M1/100‑33 (MQ=255)

                                  gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgacac                                                                   <  2:3374300‑M1/100‑35 (MQ=255)

                                  gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                   >  2:2961790/1‑100 (MQ=255)

                                    cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACAGCGAAGGCGGCTTATCCGACCTAc                                                                 >  2:1716414/1‑100 (MQ=255)

                                      cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGTGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                               <  2:824935/100‑1 (MQ=255)

                                       gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTgtcggataagccgccttcgcggtgcatccgacactaccc                                                              <  1:649812‑M1/100‑40 (MQ=255)

                                         cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                            <  1:2642336/100‑1 (MQ=255)

                                         cAGGACCGGACTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATCCATCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                            <  2:2714187/100‑1 (MQ=255)

                                           ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  1:710845/100‑1 (MQ=255)

                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                         <  2:2042562/100‑1 (MQ=255)

                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                          <  2:1638796/99‑1 (MQ=255)

                                             aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                                        >  2:1514429/1‑100 (MQ=255)

                                             aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                                        <  2:209475/100‑1 (MQ=255)

                                             aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGCCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                                         >  1:4134420/1‑99 (MQ=255)

                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  2:317188/100‑1 (MQ=255)

                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  2:1122361/100‑1 (MQ=255)

                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  1:4046833/100‑1 (MQ=255)

                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAACGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                                      <  2:4103739/100‑1 (MQ=255)

                                                ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTCCTTATATGc                                                     >  2:2824758/1‑100 (MQ=255)

                                                   ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                  >  2:573443/1‑100 (MQ=255)

                                                   ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                  >  1:2672903/1‑100 (MQ=255)

                                                     ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                                <  2:116912/100‑1 (MQ=255)

                                                      tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                                               >  1:14254/1‑100 (MQ=255)

                                                       cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggn                                              <  1:1148372/100‑2 (MQ=255)

                                                       cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                              >  1:851554/1‑100 (MQ=255)

                                                        aaCGAATTCTCCCGACCGCAAGTTCTCTTCGGACTGGGGGTAGTGCCGGATGCACCGCGAAGGCGGCTTATACGACCTACGTTCTTATATGccaaaggcc                                             >  2:800747/1‑93 (MQ=255)

                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGGCCTACGTTCTTATATGCCCAGGGGc                                             >  1:802755/1‑100 (MQ=255)

                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaatt                                             <  1:1427655‑M2/100‑25 (MQ=255)

                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                             >  1:802808/1‑100 (MQ=255)

                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                             >  2:2339086/1‑100 (MQ=255)

                                                          cGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCaa                                           >  1:291078/1‑100 (MQ=255)

                                                             aTTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATcc                                        <  1:3320683/100‑1 (MQ=255)

                                                              ttCTCACGACAGAAAATGCGCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                                       <  2:776493/100‑1 (MQ=255)

                                                               tctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCca                                      >  1:2610175/1‑100 (MQ=255)

                                                                ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  2:1363572/100‑1 (MQ=255)

                                                                ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                     <  2:407459/100‑1 (MQ=255)

                                                                  cACGACAGAAAATTCTCTTCGGACTGGGCGTAGTGTCGGATGCACCGCGAAGGCAGCTCACCCGGCATACGCGGTTATATGACCAGGCGCaagac                                        >  2:3696406/1‑92 (MQ=255)

                                                                    cGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATc                                 >  1:3270456/1‑100 (MQ=255)

                                                                     gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                <  1:3439026/100‑1 (MQ=255)

                                                                     gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                <  2:2981536/100‑1 (MQ=255)

                                                                      aCAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCt                               >  2:1197731/1‑100 (MQ=255)

                                                                      aCAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCt                               >  1:2262486/1‑100 (MQ=255)

                                                                       cAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                              <  2:2763325/100‑1 (MQ=255)

                                                                       cAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCtt                              <  1:3297773/100‑1 (MQ=255)

                                                                        aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                             >  1:3998846/1‑100 (MQ=255)

                                                                         gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa                            >  2:1442139/1‑100 (MQ=255)

                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGACGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  1:3612605/100‑1 (MQ=255)

                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  1:578263/100‑1 (MQ=255)

                                                                           aaaTTCTCTTCGGACTGGGGGTAGCGTCGGATGCACCGCGAAGGTGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                           <  2:1503312/99‑1 (MQ=255)

                                                                                 tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                    <  2:2988771/100‑1 (MQ=255)

                                                                                 tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                    <  1:3031627/100‑1 (MQ=255)

                                                                                  ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                    <  1:1468854/99‑1 (MQ=255)

                                                                                    tCGGACTGGGGGTAGTGTCGGAGGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                 <  2:3860486/100‑1 (MQ=255)

                                                                                       gACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAcc              <  2:5433/100‑1 (MQ=255)

                                                                                        aCTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCa             <  2:418129/100‑1 (MQ=255)

                                                                                         cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt            <  2:2222035/100‑1 (MQ=255)

                                                                                          tGGGGGTAGTGTCGGATGCACCGCGAAGGCGGGTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCGTAACTCAACGCAGTACCATc           <  2:1740187/100‑1 (MQ=255)

                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          <  1:1111517/100‑1 (MQ=255)

                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          >  1:3105441/1‑100 (MQ=255)

                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          >  1:3131452/1‑100 (MQ=255)

                                                                                           gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa          <  1:3933978/100‑1 (MQ=255)

                                                                                             gggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAAc        <  2:2672887/100‑1 (MQ=255)

                                                                                              ggTAGTGTCGGATTCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACa       <  1:4002945/100‑1 (MQ=255)

                                                                                                  gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgacgggac   <  1:2613555‑M2/100‑67 (MQ=255)

                                                                                                  gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACactacccccagtccgaagagaattttctgtcgtgagaattcgttgaaaatccggtcctgacgggac   <  2:3202742‑M2/100‑67 (MQ=255)

                                                                                                  gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc   >  2:2028691/1‑100 (MQ=255)

                                                                                                   tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc  >  1:2919987/1‑100 (MQ=255)

GGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCC  >  NC_000913/2393031‑2393229

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.