New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3277819 =NA (NA)13 (0.100) 8/162 NT NA noncoding (1/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3277844 = NA (NA)noncoding (26/29 nt) REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 179 total aligned reads displayed.

GTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277721‑3277918
                                                                                                  |                                                                                                   
tgatcattgttgatgaaggcattcctgcggatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccgc                                                                                                    <  2:3023471‑M1/2‑1 (MQ=255)
  aTTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCccgccg                                                                                                  <  1:1520523/100‑1 (MQ=255)
   ttCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGa                                                                                                 >  2:3983803/1‑100 (MQ=255)
      aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  2:3718772/100‑1 (MQ=255)
      aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  2:3740006/100‑1 (MQ=255)
      aGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACg                                                                                              <  2:2721631/100‑1 (MQ=255)
       gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                             >  2:2662051/1‑100 (MQ=255)
       gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGc                                                                                             >  1:3790305/1‑100 (MQ=255)
       gCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCCAACGc                                                                                             >  2:1820518/1‑100 (MQ=255)
         aaaaTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATAGTGTTCACAATGCCCGCCGAACGCAt                                                                                           <  1:2508403/100‑1 (MQ=255)
            aTGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCg                                                                                        >  1:3378877/1‑100 (MQ=255)
              gTTCAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGACACAGAAGCAACCCATTGATCTCGTCCACAATGCCCACCGAACCCACTCctg                                                                                      >  2:1785422/1‑100 (MQ=255)
              gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                      >  1:1016785/1‑100 (MQ=255)
              gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                      >  1:3466623/1‑100 (MQ=255)
              gTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCgtg                                                                                      <  1:4106817/100‑1 (MQ=255)
                tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    <  1:3389041/100‑1 (MQ=255)
                tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    >  1:2193608/1‑100 (MQ=255)
                tAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGtt                                                                                    <  1:3754212/100‑1 (MQ=255)
                  aaaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGa                                                                                  >  2:3854685/1‑100 (MQ=255)
                   aaaGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGAc                                                                                 >  1:2765251/1‑100 (MQ=255)
                        ggACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCg                                                                            >  1:1006634/1‑100 (MQ=255)
                           cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCggg                                                                          <  2:1830817/99‑1 (MQ=255)
                           cATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGc                                                                         <  1:513148/100‑1 (MQ=255)
                            aTCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                        <  1:3401522/100‑1 (MQ=255)
                            aTCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                        <  1:2330277/100‑1 (MQ=255)
                             tcctccTGCCGACTGGGACACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCa                                                                        <  2:2288040/99‑1 (MQ=255)
                             gatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                       >  1:1233930‑M1/70‑100 (MQ=255)
                             gatagcctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCAt                                                                       >  2:2102050‑M1/70‑100 (MQ=255)
                              ataggctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATc                                                                      >  2:2454375‑M1/69‑100 (MQ=255)
                               ctcctGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATcc                                                                     <  2:1286653/100‑1 (MQ=255)
                                   ctggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtc                                                                 >  2:2809163‑M1/64‑100 (MQ=255)
                                    tggaaggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                >  2:4129223‑M1/63‑100 (MQ=255)
                                    gCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTtct                                                                <  1:1372758/100‑1 (MQ=255)
                                    gCCGACTGGGAAACCCTCACACGAGAAACAGAAGAAACCCATTGATGGCGTTCACACTGCCCGCCGAACGCCTCCGTGTTGACCAGCGCGCACCCtctc                                                                 >  2:2519358/1‑99 (MQ=255)
                                      cGACTGGCAAACCCTCACCCGCGAAGCAGAAGAAACTCATTGATGGTGCTCACAATGACCGCCGAACGCGGTCGTGTTGACCAGCGGGCATCCTTtcgc                                                               <  2:3368039/99‑3 (MQ=255)
                                       gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                             <  1:2689267/100‑1 (MQ=255)
                                       gACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCAc                                                             <  1:660089/100‑1 (MQ=255)
                                        aggactgcgaaaggctggggttgaagtgattctggtcggggagtgagaaaggatgcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                            >  1:60702‑M1/59‑100 (MQ=255)
                                        aCTGGGAAACCCTGACCCGAGAAACAGAAGAAACCCACTGATGGTGTTCCAAATGCCCGCCGAACGCATTCGTGTTTACCAAAGAGCATCATctct                                                                >  2:2197390/1‑96 (MQ=255)
                                        aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                            >  2:3382319/1‑100 (MQ=255)
                                        aCTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACt                                                            <  1:2993908/100‑1 (MQ=255)
                                         cTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTc                                                           >  2:2973348/1‑100 (MQ=255)
                                           gggAAACCCTCACCCGAGCAACAGACGAACCCCATTGATGCTGTTCACAATGCCCGCCGCACGCATTCCTGTTGACCCGCGGGCATCCTTTCCCACTccc                                                         >  2:1868453/1‑100 (MQ=255)
                                           gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCtccctccc                                                         >  2:3490158/1‑100 (MQ=255)
                                           gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         <  2:1579830/100‑1 (MQ=255)
                                           gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  2:2620816/1‑100 (MQ=255)
                                           gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  1:2733228/1‑100 (MQ=255)
                                           gggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTccc                                                         >  1:3624389/1‑100 (MQ=255)
                                            ggAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTAGACTAACGGTCAttatgaaca                                                               >  2:3772205/1‑85 (MQ=255)
                                             gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCCCCCCCCg                                                       >  2:2387595/1‑100 (MQ=255)
                                             gAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCg                                                       <  1:3177374/100‑1 (MQ=255)
                                                   cTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAg                                                  <  1:3679809/99‑1 (MQ=255)
                                                    tCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGaa                                                <  1:3269757/100‑1 (MQ=255)
                                                      aCCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATc                                              <  1:3799058/100‑1 (MQ=255)
                                                       cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  2:532937/1‑100 (MQ=255)
                                                       cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             >  2:1432596/1‑100 (MQ=255)
                                                       cccGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCa                                             <  1:973855/100‑1 (MQ=255)
                                                         cGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACt                                           <  1:2275292/100‑1 (MQ=255)
                                                          gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACtt                                          <  2:1431250/100‑1 (MQ=255)
                                                          gagaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGAATCCTTTCTCACTCCCCGACCAGAATCACtt                                          >  1:2085481/1‑100 (MQ=255)
                                                           agaAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTc                                         <  2:2965889/100‑1 (MQ=255)
                                                              aaCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAc                                      >  1:3418295/1‑100 (MQ=255)
                                                               aCAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAAcc                                     >  1:2708440/1‑100 (MQ=255)
                                                                    agaaACCCATTGATGGTGTTCACAATGCCCGCCGAGCGCATTCGTGTTGACCAGCGGGCATCCTGTCTCACTCCCCGACCAGAATCACTTCAAc                                      <  2:1401493/94‑1 (MQ=255)
                                                                     gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                               >  2:309972/1‑100 (MQ=255)
                                                                     gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                               <  1:1060248/100‑1 (MQ=255)
                                                                     gaaACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGcc                               >  2:3892844/1‑100 (MQ=255)
                                                                       aaCCCATTGATGATGTGCTGAATGTTCGCCCAACGCATTCGTGTTTACAAGCGGGGATCCCTGCTCTATCCACCGCCAGAAAAACTTCAACCCCAGcc                               >  2:661344/1‑98 (MQ=255)
                                                                        aCCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCttt                            >  2:4037092/1‑100 (MQ=255)
                                                                         cccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTc                           <  2:1189333/100‑1 (MQ=255)
                                                                          ccATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCg                          <  1:2811359/100‑1 (MQ=255)
                                                                           cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  1:2635506/100‑1 (MQ=255)
                                                                           cATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGc                         <  1:3637713/100‑1 (MQ=255)
                                                                             ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       <  2:20864/100‑1 (MQ=255)
                                                                             ttGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAg                       <  2:358625/100‑1 (MQ=255)
                                                                               gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     >  1:811735/1‑100 (MQ=255)
                                                                               gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     <  1:1509492/100‑1 (MQ=255)
                                                                               gATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTc                     >  1:3138729/1‑100 (MQ=255)
                                                                                aTGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACGCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTcc                    <  1:947564/100‑1 (MQ=255)
                                                                                 tGGTGTTCACAAAGCCCGCCGAACGCATTAGTGTTGACCAGCGGGCAACCTTTACCACTCCCCGCACAAACTCACTTCAATCCCACCCGTTCGCAGTCCt                   >  2:81297/1‑100 (MQ=255)
                                                                                    tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                <  1:3548706/100‑1 (MQ=255)
                                                                                    tgtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTcc                <  1:2525361/100‑1 (MQ=255)
                                                                                     gtTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCa               >  2:3296445/1‑100 (MQ=255)
                                                                                      ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg              >  2:2173967/1‑100 (MQ=255)
                                                                                      ttCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAg              <  1:674348/100‑1 (MQ=255)
                                                                                       tCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAgg             <  2:1832961/100‑1 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCCCTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            <  1:1337761/100‑1 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  2:254867/1‑100 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  1:1110765/1‑100 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  1:2094819/1‑100 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  1:744137/1‑100 (MQ=255)
                                                                                        cacaATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGc            >  2:1163004/1‑100 (MQ=255)
                                                                                          caATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTa          >  1:1794380/1‑100 (MQ=255)
                                                                                              gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      <  1:1666635‑M1/96‑1 (MQ=255)
                                                                                              gcccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCg      <  1:1245868‑M1/96‑1 (MQ=255)
                                                                                               cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc     <  1:3132342‑M1/97‑1 (MQ=255)
                                                                                               cccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGc     <  2:2572982‑M1/97‑1 (MQ=255)
                                                                                                ccGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCa    >  1:1852234‑M1/3‑100 (MQ=255)
                                                                                                  GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg  >  1:1486174‑M1/1‑100 (MQ=255)
                                                                                                  GCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAgg  >  2:2026444‑M1/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGATGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCATCCTTTCTCACTCCCCGACCAGAATCACTTCAACCCCAGCCTTTCGCAGTCCTTCCAGGCTATCCGCAGG  >  NC_000913/3277721‑3277918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.